RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 ADGRL2O95490 1459 aa10.52□□□□□ -0.73
KDM3A-210ENST00000470160 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.73
KDM3A-210ENST00000470160 SHANK2Q9UPX8 1470 aa10.51□□□□□ -0.73
KDM3A-210ENST00000470160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.51□□□□□ -0.73
KDM3A-210ENST00000470160 RAB3GAP2Q9H2M9 1393 aa10.51□□□□□ -0.73
KDM3A-210ENST00000470160 NAIPQ13075 1403 aa10.51□□□□□ -0.73
KDM3A-210ENST00000470160 CCER1Q8TC90 406 aaPredicted RBP10.5□□□□□ -0.73
KDM3A-210ENST00000470160 DAPK1P53355 1430 aa10.5□□□□□ -0.73
KDM3A-210ENST00000470160 MAPKBP1O60336 1514 aa10.49□□□□□ -0.73
KDM3A-210ENST00000470160 CAMSAP2Q08AD1 1489 aa10.49□□□□□ -0.73
KDM3A-210ENST00000470160 MYO5CQ9NQX4 1742 aa10.49□□□□□ -0.73
KDM3A-210ENST00000470160 MAST1Q9Y2H9 1570 aa10.49□□□□□ -0.73
KDM3A-210ENST00000470160 PLEKHD1A6NEE1 506 aa10.48□□□□□ -0.73
KDM3A-210ENST00000470160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
KDM3A-210ENST00000470160 ABCC5O15440 1437 aa10.48□□□□□ -0.73
KDM3A-210ENST00000470160 TTC37Q6PGP7 1564 aa10.46□□□□□ -0.73
KDM3A-210ENST00000470160 OSCARQ8IYS5 282 aa10.46□□□□□ -0.74
KDM3A-210ENST00000470160 SAMD9LQ8IVG5 1584 aa10.45□□□□□ -0.74
KDM3A-210ENST00000470160 FAM50AQ14320 339 aaKnown RBP10.45□□□□□ -0.74
KDM3A-210ENST00000470160 ABCA9Q8IUA7 1624 aa10.45□□□□□ -0.74
KDM3A-210ENST00000470160 KIAA1107Q9UPP5 1409 aa10.45□□□□□ -0.74
KDM3A-210ENST00000470160 PLEKHH2Q8IVE3 1493 aa10.44□□□□□ -0.74
KDM3A-210ENST00000470160 MBD5Q9P267 1494 aa10.44□□□□□ -0.74
KDM3A-210ENST00000470160 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
KDM3A-210ENST00000470160 RSPH4AQ5TD94 716 aa10.42□□□□□ -0.74
KDM3A-210ENST00000470160 PLXNC1O60486 1568 aa10.42□□□□□ -0.74
KDM3A-210ENST00000470160 PLCH2O75038 1416 aa10.41□□□□□ -0.74
KDM3A-210ENST00000470160 KDM5DQ9BY66 1539 aa10.41□□□□□ -0.74
KDM3A-210ENST00000470160 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
KDM3A-210ENST00000470160 WDR7Q9Y4E6 1490 aa10.41□□□□□ -0.74
KDM3A-210ENST00000470160 KDM6BO15054 1643 aa10.4□□□□□ -0.74
KDM3A-210ENST00000470160 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
KDM3A-210ENST00000470160 CCDC141Q6ZP82 1450 aa10.39□□□□□ -0.75
KDM3A-210ENST00000470160 ABCC1P33527 1531 aa10.39□□□□□ -0.75
KDM3A-210ENST00000470160 DENND4BO75064 1496 aaPredicted RBP10.38□□□□□ -0.75
KDM3A-210ENST00000470160 CFAP74Q9C0B2 1584 aa10.36□□□□□ -0.75
KDM3A-210ENST00000470160 ANKRD30AQ9BXX3 1397 aa10.35□□□□□ -0.75
KDM3A-210ENST00000470160 ZNF644Q9H582 1327 aaPredicted RBP10.35□□□□□ -0.75
KDM3A-210ENST00000470160 C9orf84Q5VXU9 1444 aa10.35□□□□□ -0.75
KDM3A-210ENST00000470160 ARHGAP5Q13017 1502 aa10.35□□□□□ -0.75
KDM3A-210ENST00000470160 UNC13BO14795 1591 aa10.35□□□□□ -0.75
KDM3A-210ENST00000470160 ITGAEP38570 1179 aa10.35□□□□□ -0.75
KDM3A-210ENST00000470160 RTEL1-TNFRSF6BF6WH68 1400 aa10.34□□□□□ -0.75
KDM3A-210ENST00000470160 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
KDM3A-210ENST00000470160 GLI2P10070 1586 aa10.34□□□□□ -0.75
KDM3A-210ENST00000470160 SYCP2Q9BX26 1530 aa10.34□□□□□ -0.75
KDM3A-210ENST00000470160 ASXL2Q76L83 1435 aa10.33□□□□□ -0.76
KDM3A-210ENST00000470160 ARHGEF12Q9NZN5 1544 aa10.33□□□□□ -0.76
KDM3A-210ENST00000470160 MAGI2Q86UL8 1455 aa10.32□□□□□ -0.76
KDM3A-210ENST00000470160 RIMBP3CA6NJZ7 1639 aa10.32□□□□□ -0.76
KDM3A-210ENST00000470160 RIMBP3BA6NNM3 1639 aa10.32□□□□□ -0.76
KDM3A-210ENST00000470160 RIMBP3Q9UFD9 1639 aa10.32□□□□□ -0.76
KDM3A-210ENST00000470160 PZPP20742 1482 aa10.32□□□□□ -0.76
KDM3A-210ENST00000470160 INO80Q9ULG1 1556 aaPredicted RBP10.31□□□□□ -0.76
KDM3A-210ENST00000470160 DUOX2Q9NRD8 1548 aa10.31□□□□□ -0.76
KDM3A-210ENST00000470160 MAP3K4Q9Y6R4 1608 aa10.3□□□□□ -0.76
KDM3A-210ENST00000470160 ANKRD50Q9ULJ7 1429 aa10.3□□□□□ -0.76
KDM3A-210ENST00000470160 BCORL1Q5H9F3 1711 aa10.29□□□□□ -0.76
KDM3A-210ENST00000470160 DEPDC5O75140 1603 aa10.29□□□□□ -0.76
KDM3A-210ENST00000470160 IQGAP3Q86VI3 1631 aa10.29□□□□□ -0.76
KDM3A-210ENST00000470160 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
KDM3A-210ENST00000470160 ERBINQ96RT1 1412 aa10.29□□□□□ -0.76
KDM3A-210ENST00000470160 EFCAB2Q5VUJ9 269 aa10.29□□□□□ -0.76
KDM3A-210ENST00000470160 ZFYVE16Q7Z3T8 1539 aa10.28□□□□□ -0.76
KDM3A-210ENST00000470160 KDM5CP41229 1560 aa10.27□□□□□ -0.76
KDM3A-210ENST00000470160 RRP7BPQ9NSQ0 103 aa10.27□□□□□ -0.76
KDM3A-210ENST00000470160 ANKRD30BQ9BXX2 1392 aa10.27□□□□□ -0.77
KDM3A-210ENST00000470160 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.77
KDM3A-210ENST00000470160 FANCAO15360 1455 aa10.26□□□□□ -0.77
KDM3A-210ENST00000470160 NEO1Q92859 1461 aa10.26□□□□□ -0.77
KDM3A-210ENST00000470160 RPRD2Q5VT52 1461 aaKnown RBP10.26□□□□□ -0.77
KDM3A-210ENST00000470160 KIF15Q9NS87 1388 aa10.26□□□□□ -0.77
KDM3A-210ENST00000470160 TSPY4P0CV99 314 aa10.26□□□□□ -0.77
KDM3A-210ENST00000470160 TSPY10P0CW01 314 aa10.26□□□□□ -0.77
KDM3A-210ENST00000470160 MPHOSPH9Q99550 1183 aa10.25□□□□□ -0.77
KDM3A-210ENST00000470160 CHIC2Q9UKJ5 165 aa10.25□□□□□ -0.77
KDM3A-210ENST00000470160 VWDEQ8N2E2 1590 aa10.25□□□□□ -0.77
KDM3A-210ENST00000470160 ATP10AO60312 1499 aa10.24□□□□□ -0.77
KDM3A-210ENST00000470160 TRAPPC8Q9Y2L5 1435 aa10.23□□□□□ -0.77
KDM3A-210ENST00000470160 ZNF316A6NFI3 1004 aaPredicted RBP10.23□□□□□ -0.77
KDM3A-210ENST00000470160 HNRNPMP52272 730 aaKnown RBP eCLIP10.23□□□□□ -0.77
KDM3A-210ENST00000470160 ATP7AQ04656 1500 aa10.23□□□□□ -0.77
KDM3A-210ENST00000470160 KIDINS220Q9ULH0 1771 aa10.23□□□□□ -0.77
KDM3A-210ENST00000470160 ZNF777Q9ULD5 760 aaPredicted RBP10.22□□□□□ -0.77
KDM3A-210ENST00000470160 MLH3Q9UHC1 1453 aa10.22□□□□□ -0.77
KDM3A-210ENST00000470160 PPP1R15AO75807 674 aaPredicted RBP10.22□□□□□ -0.77
KDM3A-210ENST00000470160 FAM135AQ9P2D6 1515 aa10.22□□□□□ -0.77
KDM3A-210ENST00000470160 TEX14Q8IWB6 1497 aa10.21□□□□□ -0.77
KDM3A-210ENST00000470160 NEURL4Q96JN8 1562 aa10.21□□□□□ -0.77
KDM3A-210ENST00000470160 ADGRL1O94910 1474 aa10.21□□□□□ -0.78
KDM3A-210ENST00000470160 RNF17Q9BXT8 1623 aaKnown RBP10.21□□□□□ -0.78
KDM3A-210ENST00000470160 NPM1P06748 294 aaKnown RBP eCLIP10.21□□□□□ -0.78
KDM3A-210ENST00000470160 DIP2BQ9P265 1576 aa10.21□□□□□ -0.78
KDM3A-210ENST00000470160 ZNF518AQ6AHZ1 1483 aa10.21□□□□□ -0.78
KDM3A-210ENST00000470160 RICTORQ6R327 1708 aa10.2□□□□□ -0.78
KDM3A-210ENST00000470160 CD109Q6YHK3 1445 aa10.2□□□□□ -0.78
KDM3A-210ENST00000470160 DAXXQ9UER7 740 aaPredicted RBP10.2□□□□□ -0.78
KDM3A-210ENST00000470160 PRDM15P57071 1507 aaPredicted RBP10.19□□□□□ -0.78
KDM3A-210ENST00000470160 POGZQ7Z3K3 1410 aa10.19□□□□□ -0.78
KDM3A-210ENST00000470160 PPRC1Q5VV67 1664 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms