RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 DISP3Q9P2K9 1392 aa30.87■■■□□ 2.53
USP11-205ENST00000467378 YEATS2Q9ULM3 1422 aa30.87■■■□□ 2.53
USP11-205ENST00000467378 TTC37Q6PGP7 1564 aa30.86■■■□□ 2.53
USP11-205ENST00000467378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.85■■■□□ 2.53
USP11-205ENST00000467378 PREX1Q8TCU6 1659 aa30.83■■■□□ 2.53
USP11-205ENST00000467378 ILDR2Q71H61 639 aa30.82■■■□□ 2.52
USP11-205ENST00000467378 HECW1Q76N89 1606 aa30.82■■■□□ 2.52
USP11-205ENST00000467378 MAGI2Q86UL8 1455 aa30.81■■■□□ 2.52
USP11-205ENST00000467378 CLIP1P30622 1438 aa30.79■■■□□ 2.52
USP11-205ENST00000467378 SOCS7O14512 581 aa30.77■■■□□ 2.52
USP11-205ENST00000467378 CEP162Q5TB80 1403 aa30.73■■■□□ 2.51
USP11-205ENST00000467378 STRCQ7RTU9 1775 aa30.72■■■□□ 2.51
USP11-205ENST00000467378 ARHGEF12Q9NZN5 1544 aa30.71■■■□□ 2.51
USP11-205ENST00000467378 SCAPERQ9BY12 1400 aa30.7■■■□□ 2.5
USP11-205ENST00000467378 FMN1Q68DA7 1419 aa30.69■■■□□ 2.5
USP11-205ENST00000467378 CEBPAP49715 358 aaPredicted RBP30.67■■■□□ 2.5
USP11-205ENST00000467378 DMRT2Q9Y5R5 561 aa30.67■■■□□ 2.5
USP11-205ENST00000467378 ATP10AO60312 1499 aa30.67■■■□□ 2.5
USP11-205ENST00000467378 C9orf84Q5VXU9 1444 aa30.64■■■□□ 2.5
USP11-205ENST00000467378 SPATA31D1Q6ZQQ2 1576 aa30.63■■■□□ 2.49
USP11-205ENST00000467378 SETD1BQ9UPS6 1966 aaKnown RBP30.63■■■□□ 2.49
USP11-205ENST00000467378 CDK13Q14004 1512 aaKnown RBP30.62■■■□□ 2.49
USP11-205ENST00000467378 PLCH2O75038 1416 aa30.61■■■□□ 2.49
USP11-205ENST00000467378 MYO5CQ9NQX4 1742 aa30.61■■■□□ 2.49
USP11-205ENST00000467378 UHRF1BP1Q6BDS2 1440 aa30.59■■■□□ 2.49
USP11-205ENST00000467378 EFCAB2Q5VUJ9 269 aa30.52■■■□□ 2.48
USP11-205ENST00000467378 LRRIQ1Q96JM4 1722 aa30.51■■■□□ 2.47
USP11-205ENST00000467378 CASKIN1Q8WXD9 1431 aa30.5■■■□□ 2.47
USP11-205ENST00000467378 MYT1LQ9UL68 1186 aa30.49■■■□□ 2.47
USP11-205ENST00000467378 C3P01024 1663 aa30.49■■■□□ 2.47
USP11-205ENST00000467378 ATP1B4Q9UN42 357 aaPredicted RBP30.47■■■□□ 2.47
USP11-205ENST00000467378 PTPRTO14522 1441 aa30.47■■■□□ 2.47
USP11-205ENST00000467378 ZNF518AQ6AHZ1 1483 aa30.46■■■□□ 2.47
USP11-205ENST00000467378 FYCO1Q9BQS8 1478 aa30.44■■■□□ 2.46
USP11-205ENST00000467378 KIF14Q15058 1648 aa30.42■■■□□ 2.46
USP11-205ENST00000467378 KDM5CP41229 1560 aa30.41■■■□□ 2.46
USP11-205ENST00000467378 DIP2CQ9Y2E4 1556 aa30.41■■■□□ 2.46
USP11-205ENST00000467378 AFAP1Q8N556 730 aa30.41■■■□□ 2.46
USP11-205ENST00000467378 ARHGAP5Q13017 1502 aa30.4■■■□□ 2.46
USP11-205ENST00000467378 LTBP4Q8N2S1 1624 aa30.4■■■□□ 2.46
USP11-205ENST00000467378 ESF1Q9H501 851 aaKnown RBP30.38■■■□□ 2.45
USP11-205ENST00000467378 REREQ9P2R6 1566 aa30.37■■■□□ 2.45
USP11-205ENST00000467378 ABCA6Q8N139 1617 aa30.36■■■□□ 2.45
USP11-205ENST00000467378 CDK11AQ9UQ88 783 aaPredicted RBP30.36■■■□□ 2.45
USP11-205ENST00000467378 VPS8Q8N3P4 1428 aa30.35■■■□□ 2.45
USP11-205ENST00000467378 IQSEC2Q5JU85 1478 aa30.35■■■□□ 2.45
USP11-205ENST00000467378 CCDC18Q5T9S5 1454 aa30.34■■■□□ 2.45
USP11-205ENST00000467378 TRAPPC8Q9Y2L5 1435 aa30.3■■■□□ 2.44
USP11-205ENST00000467378 CDC42BPBQ9Y5S2 1711 aa30.3■■■□□ 2.44
USP11-205ENST00000467378 NCOA1Q15788 1441 aa30.28■■■□□ 2.44
USP11-205ENST00000467378 MLH3Q9UHC1 1453 aa30.26■■■□□ 2.44
USP11-205ENST00000467378 TROQ12816 1431 aaPredicted RBP30.26■■■□□ 2.43
USP11-205ENST00000467378 AGLP35573 1532 aa30.26■■■□□ 2.43
USP11-205ENST00000467378 CAMSAP1Q5T5Y3 1602 aa30.23■■■□□ 2.43
USP11-205ENST00000467378 ITSN2Q9NZM3 1697 aa30.22■■■□□ 2.43
USP11-205ENST00000467378 CNTLNQ9NXG0 1405 aa30.2■■■□□ 2.42
USP11-205ENST00000467378 KIDINS220Q9ULH0 1771 aa30.18■■■□□ 2.42
USP11-205ENST00000467378 PREX2Q70Z35 1606 aa30.18■■■□□ 2.42
USP11-205ENST00000467378 ABCC1P33527 1531 aa30.17■■■□□ 2.42
USP11-205ENST00000467378 SUPT6HQ7KZ85 1726 aaKnown RBP30.17■■■□□ 2.42
USP11-205ENST00000467378 MROH2AA6NES4 1674 aa30.17■■■□□ 2.42
USP11-205ENST00000467378 UBAP1LF5GYI3 381 aa30.16■■■□□ 2.42
USP11-205ENST00000467378 TIAM1Q13009 1591 aa30.12■■■□□ 2.41
USP11-205ENST00000467378 ZNF335Q9H4Z2 1342 aaPredicted RBP30.12■■■□□ 2.41
USP11-205ENST00000467378 NCKAP5LQ9HCH0 1330 aa30.12■■■□□ 2.41
USP11-205ENST00000467378 NPATQ14207 1427 aa30.11■■■□□ 2.41
USP11-205ENST00000467378 MAP3K1Q13233 1512 aa30.08■■■□□ 2.41
USP11-205ENST00000467378 CDC42BPAQ5VT25 1732 aa30.07■■■□□ 2.4
USP11-205ENST00000467378 ZMYM3Q14202 1370 aa30.05■■■□□ 2.4
USP11-205ENST00000467378 CLTCQ00610 1675 aaKnown RBP30.05■■■□□ 2.4
USP11-205ENST00000467378 ZNF142P52746 1687 aaPredicted RBP30.04■■■□□ 2.4
USP11-205ENST00000467378 MYO3AQ8NEV4 1616 aa30.04■■■□□ 2.4
USP11-205ENST00000467378 MTUS2Q5JR59 1369 aa30.03■■■□□ 2.4
USP11-205ENST00000467378 EHBP1L1Q8N3D4 1523 aa30.01■■■□□ 2.4
USP11-205ENST00000467378 SAMD9LQ8IVG5 1584 aa30.01■■■□□ 2.39
USP11-205ENST00000467378 PKD2Q13563 968 aa29.99■■■□□ 2.39
USP11-205ENST00000467378 PLA2R1Q13018 1463 aa29.98■■■□□ 2.39
USP11-205ENST00000467378 LRRC9Q6ZRR7 1453 aa29.98■■■□□ 2.39
USP11-205ENST00000467378 CEP170BQ9Y4F5 1589 aaPredicted RBP29.98■■■□□ 2.39
USP11-205ENST00000467378 ZNF777Q9ULD5 760 aaPredicted RBP29.96■■■□□ 2.39
USP11-205ENST00000467378 APLP2Q06481 763 aa29.95■■■□□ 2.39
USP11-205ENST00000467378 KANK4Q5T7N3 995 aaPredicted RBP29.95■■■□□ 2.39
USP11-205ENST00000467378 SCAF1Q9H7N4 1312 aaKnown RBP29.94■■■□□ 2.38
USP11-205ENST00000467378 SPAG9O60271 1321 aaKnown RBP29.93■■■□□ 2.38
USP11-205ENST00000467378 TCOF1Q13428 1488 aaKnown RBP29.93■■■□□ 2.38
USP11-205ENST00000467378 SYCP2Q9BX26 1530 aa29.92■■■□□ 2.38
USP11-205ENST00000467378 MED1Q15648 1581 aaPredicted RBP29.92■■■□□ 2.38
USP11-205ENST00000467378 PPP6R1Q9UPN7 881 aa29.91■■■□□ 2.38
USP11-205ENST00000467378 PTPRKQ15262 1439 aa29.88■■■□□ 2.37
USP11-205ENST00000467378 ATP7AQ04656 1500 aa29.88■■■□□ 2.37
USP11-205ENST00000467378 HSPA1LP34931 641 aa29.87■■■□□ 2.37
USP11-205ENST00000467378 HNRNPMP52272 730 aaKnown RBP eCLIP29.86■■■□□ 2.37
USP11-205ENST00000467378 PIP4K2BP78356 416 aa29.86■■■□□ 2.37
USP11-205ENST00000467378 GGT6Q6P531 493 aa29.85■■■□□ 2.37
USP11-205ENST00000467378 NCOA2Q15596 1464 aa29.85■■■□□ 2.37
USP11-205ENST00000467378 PLXNC1O60486 1568 aa29.85■■■□□ 2.37
USP11-205ENST00000467378 A2MP01023 1474 aa29.84■■■□□ 2.37
USP11-205ENST00000467378 GPATCH8Q9UKJ3 1502 aaKnown RBP29.84■■■□□ 2.37
USP11-205ENST00000467378 POLR1AO95602 1720 aaPredicted RBP29.83■■■□□ 2.37
USP11-205ENST00000467378 INO80Q9ULG1 1556 aaPredicted RBP29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms