RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 FER1L4A9Z1Z3 1794 aa26.05■■□□□ 1.76
TSSC4-208ENST00000467308 CDK11AQ9UQ88 783 aaPredicted RBP26.03■■□□□ 1.76
TSSC4-208ENST00000467308 UBTFP17480 764 aaKnown RBP26.02■■□□□ 1.76
TSSC4-208ENST00000467308 EFCAB2Q5VUJ9 269 aa26.02■■□□□ 1.76
TSSC4-208ENST00000467308 ATP10AO60312 1499 aa26.01■■□□□ 1.75
TSSC4-208ENST00000467308 HSPA2P54652 639 aa26.01■■□□□ 1.75
TSSC4-208ENST00000467308 ARHGAP35Q9NRY4 1499 aa26.01■■□□□ 1.75
TSSC4-208ENST00000467308 C9orf84Q5VXU9 1444 aa25.99■■□□□ 1.75
TSSC4-208ENST00000467308 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
TSSC4-208ENST00000467308 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
TSSC4-208ENST00000467308 MLECQ14165 292 aa25.98■■□□□ 1.75
TSSC4-208ENST00000467308 PLPPR3Q6T4P5 718 aa25.98■■□□□ 1.75
TSSC4-208ENST00000467308 KIF14Q15058 1648 aa25.97■■□□□ 1.75
TSSC4-208ENST00000467308 ZNF518AQ6AHZ1 1483 aa25.95■■□□□ 1.74
TSSC4-208ENST00000467308 TROQ12816 1431 aaPredicted RBP25.95■■□□□ 1.74
TSSC4-208ENST00000467308 KDM5CP41229 1560 aa25.92■■□□□ 1.74
TSSC4-208ENST00000467308 CLIP1P30622 1438 aa25.92■■□□□ 1.74
TSSC4-208ENST00000467308 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
TSSC4-208ENST00000467308 ARHGAP5Q13017 1502 aa25.91■■□□□ 1.74
TSSC4-208ENST00000467308 PREX1Q8TCU6 1659 aa25.89■■□□□ 1.73
TSSC4-208ENST00000467308 LRRIQ1Q96JM4 1722 aa25.88■■□□□ 1.73
TSSC4-208ENST00000467308 AFAP1Q8N556 730 aa25.85■■□□□ 1.73
TSSC4-208ENST00000467308 REREQ9P2R6 1566 aa25.85■■□□□ 1.73
TSSC4-208ENST00000467308 CDC42BPBQ9Y5S2 1711 aa25.83■■□□□ 1.73
TSSC4-208ENST00000467308 CERKQ8TCT0 537 aa25.83■■□□□ 1.73
TSSC4-208ENST00000467308 SETD1BQ9UPS6 1966 aaKnown RBP25.83■■□□□ 1.73
TSSC4-208ENST00000467308 DIP2CQ9Y2E4 1556 aa25.82■■□□□ 1.72
TSSC4-208ENST00000467308 MLH3Q9UHC1 1453 aa25.81■■□□□ 1.72
TSSC4-208ENST00000467308 CEBPAP49715 358 aaPredicted RBP25.8■■□□□ 1.72
TSSC4-208ENST00000467308 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
TSSC4-208ENST00000467308 PREX2Q70Z35 1606 aa25.79■■□□□ 1.72
TSSC4-208ENST00000467308 CCDC18Q5T9S5 1454 aa25.79■■□□□ 1.72
TSSC4-208ENST00000467308 MYT1LQ9UL68 1186 aa25.78■■□□□ 1.72
TSSC4-208ENST00000467308 CASKIN1Q8WXD9 1431 aa25.77■■□□□ 1.72
TSSC4-208ENST00000467308 ABCA6Q8N139 1617 aa25.77■■□□□ 1.72
TSSC4-208ENST00000467308 ABCC1P33527 1531 aa25.76■■□□□ 1.71
TSSC4-208ENST00000467308 AGLP35573 1532 aa25.75■■□□□ 1.71
TSSC4-208ENST00000467308 UHRF1BP1Q6BDS2 1440 aa25.75■■□□□ 1.71
TSSC4-208ENST00000467308 DMRT2Q9Y5R5 561 aa25.75■■□□□ 1.71
TSSC4-208ENST00000467308 STRCQ7RTU9 1775 aa25.74■■□□□ 1.71
TSSC4-208ENST00000467308 ITSN2Q9NZM3 1697 aa25.73■■□□□ 1.71
TSSC4-208ENST00000467308 TRAPPC8Q9Y2L5 1435 aa25.72■■□□□ 1.71
TSSC4-208ENST00000467308 C3P01024 1663 aa25.71■■□□□ 1.71
TSSC4-208ENST00000467308 CDC42BPAQ5VT25 1732 aa25.69■■□□□ 1.7
TSSC4-208ENST00000467308 KIDINS220Q9ULH0 1771 aa25.67■■□□□ 1.7
TSSC4-208ENST00000467308 ESF1Q9H501 851 aaKnown RBP25.66■■□□□ 1.7
TSSC4-208ENST00000467308 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
TSSC4-208ENST00000467308 CNTLNQ9NXG0 1405 aa25.63■■□□□ 1.69
TSSC4-208ENST00000467308 PTPRTO14522 1441 aa25.62■■□□□ 1.69
TSSC4-208ENST00000467308 SAMD9LQ8IVG5 1584 aa25.6■■□□□ 1.69
TSSC4-208ENST00000467308 MROH2AA6NES4 1674 aa25.56■■□□□ 1.68
TSSC4-208ENST00000467308 GPATCH8Q9UKJ3 1502 aaKnown RBP25.56■■□□□ 1.68
TSSC4-208ENST00000467308 SYCP2Q9BX26 1530 aa25.55■■□□□ 1.68
TSSC4-208ENST00000467308 NPATQ14207 1427 aa25.54■■□□□ 1.68
TSSC4-208ENST00000467308 ZNF777Q9ULD5 760 aaPredicted RBP25.53■■□□□ 1.68
TSSC4-208ENST00000467308 SPAG9O60271 1321 aaKnown RBP25.53■■□□□ 1.68
TSSC4-208ENST00000467308 NCOA1Q15788 1441 aa25.52■■□□□ 1.68
TSSC4-208ENST00000467308 KIAA1107Q9UPP5 1409 aa25.52■■□□□ 1.68
TSSC4-208ENST00000467308 PLEKHH2Q8IVE3 1493 aa25.51■■□□□ 1.67
TSSC4-208ENST00000467308 ATP7AQ04656 1500 aa25.49■■□□□ 1.67
TSSC4-208ENST00000467308 SUPT6HQ7KZ85 1726 aaKnown RBP25.49■■□□□ 1.67
TSSC4-208ENST00000467308 ZMYM3Q14202 1370 aa25.48■■□□□ 1.67
TSSC4-208ENST00000467308 HNRNPMP52272 730 aaKnown RBP eCLIP25.48■■□□□ 1.67
TSSC4-208ENST00000467308 LTBP4Q8N2S1 1624 aa25.48■■□□□ 1.67
TSSC4-208ENST00000467308 PLXNC1O60486 1568 aa25.47■■□□□ 1.67
TSSC4-208ENST00000467308 INO80Q9ULG1 1556 aaPredicted RBP25.47■■□□□ 1.67
TSSC4-208ENST00000467308 CFDP1Q9UEE9 299 aaPredicted RBP25.46■■□□□ 1.67
TSSC4-208ENST00000467308 IQSEC2Q5JU85 1478 aa25.46■■□□□ 1.67
TSSC4-208ENST00000467308 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.66
TSSC4-208ENST00000467308 CCNB3Q8WWL7 1395 aa25.44■■□□□ 1.66
TSSC4-208ENST00000467308 A2MP01023 1474 aa25.43■■□□□ 1.66
TSSC4-208ENST00000467308 CLTCQ00610 1675 aaKnown RBP25.42■■□□□ 1.66
TSSC4-208ENST00000467308 MTUS2Q5JR59 1369 aa25.4■■□□□ 1.66
TSSC4-208ENST00000467308 DISP3Q9P2K9 1392 aa25.4■■□□□ 1.66
TSSC4-208ENST00000467308 ZNF142P52746 1687 aaPredicted RBP25.39■■□□□ 1.66
TSSC4-208ENST00000467308 PPP6R1Q9UPN7 881 aa25.38■■□□□ 1.65
TSSC4-208ENST00000467308 ADGBQ8N7X0 1667 aa25.38■■□□□ 1.65
TSSC4-208ENST00000467308 MYO3AQ8NEV4 1616 aa25.37■■□□□ 1.65
TSSC4-208ENST00000467308 PLA2R1Q13018 1463 aa25.36■■□□□ 1.65
TSSC4-208ENST00000467308 PTPRKQ15262 1439 aa25.36■■□□□ 1.65
TSSC4-208ENST00000467308 TIAM1Q13009 1591 aa25.33■■□□□ 1.65
TSSC4-208ENST00000467308 PKD2Q13563 968 aa25.33■■□□□ 1.65
TSSC4-208ENST00000467308 GGT6Q6P531 493 aa25.33■■□□□ 1.65
TSSC4-208ENST00000467308 CEP170BQ9Y4F5 1589 aaPredicted RBP25.33■■□□□ 1.65
TSSC4-208ENST00000467308 NCKAP5LQ9HCH0 1330 aa25.32■■□□□ 1.64
TSSC4-208ENST00000467308 MBD5Q9P267 1494 aa25.31■■□□□ 1.64
TSSC4-208ENST00000467308 EHBP1L1Q8N3D4 1523 aa25.31■■□□□ 1.64
TSSC4-208ENST00000467308 RTEL1-TNFRSF6BF6WH68 1400 aa25.3■■□□□ 1.64
TSSC4-208ENST00000467308 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
TSSC4-208ENST00000467308 ILDR2Q71H61 639 aa25.3■■□□□ 1.64
TSSC4-208ENST00000467308 SPATA31D1Q6ZQQ2 1576 aa25.28■■□□□ 1.64
TSSC4-208ENST00000467308 ZNF644Q9H582 1327 aaPredicted RBP25.28■■□□□ 1.64
TSSC4-208ENST00000467308 CEP162Q5TB80 1403 aa25.28■■□□□ 1.64
TSSC4-208ENST00000467308 ZNF335Q9H4Z2 1342 aaPredicted RBP25.27■■□□□ 1.64
TSSC4-208ENST00000467308 DHX29Q7Z478 1369 aaKnown RBP25.24■■□□□ 1.63
TSSC4-208ENST00000467308 SOCS7O14512 581 aa25.24■■□□□ 1.63
TSSC4-208ENST00000467308 A2ML1A8K2U0 1454 aa25.22■■□□□ 1.63
TSSC4-208ENST00000467308 DNMT1P26358 1616 aaKnown RBP25.2■■□□□ 1.62
TSSC4-208ENST00000467308 FAM135AQ9P2D6 1515 aa25.2■■□□□ 1.62
TSSC4-208ENST00000467308 CCDC141Q6ZP82 1450 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms