RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
ATG3-204ENST00000467275 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
ATG3-204ENST00000467275 RYDENQ9NUL5 291 aaKnown RBP14.13□□□□□ -0.15
ATG3-204ENST00000467275 EMP3P54852 163 aa14.12□□□□□ -0.15
ATG3-204ENST00000467275 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
ATG3-204ENST00000467275 C2orf72A6NCS6 295 aa14.09□□□□□ -0.15
ATG3-204ENST00000467275 CDAN1Q8IWY9 1227 aa14.09□□□□□ -0.15
ATG3-204ENST00000467275 TMC2Q8TDI7 906 aa14.09□□□□□ -0.15
ATG3-204ENST00000467275 KIF3CO14782 793 aa14.06□□□□□ -0.16
ATG3-204ENST00000467275 PLSCR2Q9NRY7 297 aa14.06□□□□□ -0.16
ATG3-204ENST00000467275 HOXB1P14653 301 aaPredicted RBP14.05□□□□□ -0.16
ATG3-204ENST00000467275 FAM205CA6NFA0 338 aa14.02□□□□□ -0.17
ATG3-204ENST00000467275 ZSWIM6Q9HCJ5 1215 aa14.02□□□□□ -0.17
ATG3-204ENST00000467275 RTN4Q9NQC3 1192 aaKnown RBP14.02□□□□□ -0.17
ATG3-204ENST00000467275 GTPBP6O43824 516 aaPredicted RBP13.98□□□□□ -0.17
ATG3-204ENST00000467275 HS3ST6Q96QI5 342 aa13.98□□□□□ -0.17
ATG3-204ENST00000467275 ERBB3P21860 1342 aa13.95□□□□□ -0.18
ATG3-204ENST00000467275 ARSIQ5FYB1 569 aa13.95□□□□□ -0.18
ATG3-204ENST00000467275 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
ATG3-204ENST00000467275 POTEB3A0JP26 581 aa13.92□□□□□ -0.18
ATG3-204ENST00000467275 POTEBQ6S5H4 581 aa13.92□□□□□ -0.18
ATG3-204ENST00000467275 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
ATG3-204ENST00000467275 FOXK1P85037 733 aa13.89□□□□□ -0.19
ATG3-204ENST00000467275 SLC34A2O95436 690 aa13.88□□□□□ -0.19
ATG3-204ENST00000467275 KHSRPQ92945 711 aaKnown RBP eCLIP13.88□□□□□ -0.19
ATG3-204ENST00000467275 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
ATG3-204ENST00000467275 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
ATG3-204ENST00000467275 BBXQ8WY36 941 aaPredicted RBP13.87□□□□□ -0.19
ATG3-204ENST00000467275 DSG2Q14126 1118 aa13.86□□□□□ -0.19
ATG3-204ENST00000467275 PCDHGA4Q9Y5G9 962 aa13.85□□□□□ -0.19
ATG3-204ENST00000467275 NUDT7P0C024 238 aa13.82□□□□□ -0.2
ATG3-204ENST00000467275 CRISPLD2Q9H0B8 497 aa13.82□□□□□ -0.2
ATG3-204ENST00000467275 PDE4AP27815 886 aa13.81□□□□□ -0.2
ATG3-204ENST00000467275 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
ATG3-204ENST00000467275 KRTAP3-3Q9BYR6 98 aa13.78□□□□□ -0.2
ATG3-204ENST00000467275 KRTAP3-2Q9BYR7 98 aa13.78□□□□□ -0.2
ATG3-204ENST00000467275 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
ATG3-204ENST00000467275 NCKAP5LQ9HCH0 1330 aa13.78□□□□□ -0.2
ATG3-204ENST00000467275 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
ATG3-204ENST00000467275 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
ATG3-204ENST00000467275 TBC1D12O60347 775 aa13.75□□□□□ -0.21
ATG3-204ENST00000467275 ZNF687Q8N1G0 1237 aa13.75□□□□□ -0.21
ATG3-204ENST00000467275 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
ATG3-204ENST00000467275 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
ATG3-204ENST00000467275 SPRYD3Q8NCJ5 442 aa13.72□□□□□ -0.21
ATG3-204ENST00000467275 LHX6Q9UPM6 363 aa13.72□□□□□ -0.21
ATG3-204ENST00000467275 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
ATG3-204ENST00000467275 UPF1Q92900 1129 aaKnown RBP eCLIP13.7□□□□□ -0.22
ATG3-204ENST00000467275 CADPS2Q86UW7 1296 aa13.69□□□□□ -0.22
ATG3-204ENST00000467275 OXER1Q8TDS5 423 aa13.66□□□□□ -0.22
ATG3-204ENST00000467275 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
ATG3-204ENST00000467275 KDM4FA0A1W2PPD8 638 aa13.64□□□□□ -0.23
ATG3-204ENST00000467275 MFSD10Q14728 455 aa13.64□□□□□ -0.23
ATG3-204ENST00000467275 PAXIP1Q6ZW49 1069 aaPredicted RBP13.64□□□□□ -0.23
ATG3-204ENST00000467275 PSDA5PKW4 1024 aaPredicted RBP13.63□□□□□ -0.23
ATG3-204ENST00000467275 MMRN1Q13201 1228 aa13.62□□□□□ -0.23
ATG3-204ENST00000467275 PBX2P40425 430 aa13.57□□□□□ -0.24
ATG3-204ENST00000467275 ANKRD13DQ6ZTN6 518 aa13.56□□□□□ -0.24
ATG3-204ENST00000467275 MAP3K9P80192 1104 aa13.55□□□□□ -0.24
ATG3-204ENST00000467275 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
ATG3-204ENST00000467275 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
ATG3-204ENST00000467275 LSM11P83369 360 aaKnown RBP eCLIP13.53□□□□□ -0.24
ATG3-204ENST00000467275 EVI5O60447 810 aa13.52□□□□□ -0.25
ATG3-204ENST00000467275 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.25
ATG3-204ENST00000467275 POTEEQ6S8J3 1075 aa13.51□□□□□ -0.25
ATG3-204ENST00000467275 ARHGAP33O14559 1287 aa13.5□□□□□ -0.25
ATG3-204ENST00000467275 ZNF454Q8N9F8 522 aa13.49□□□□□ -0.25
ATG3-204ENST00000467275 ANO8Q9HCE9 1232 aaPredicted RBP13.47□□□□□ -0.25
ATG3-204ENST00000467275 PTGER2P43116 358 aa13.45□□□□□ -0.26
ATG3-204ENST00000467275 CAMK2BQ13554 666 aa13.45□□□□□ -0.26
ATG3-204ENST00000467275 KCNH8Q96L42 1107 aa13.45□□□□□ -0.26
ATG3-204ENST00000467275 MYT1LQ9UL68 1186 aa13.45□□□□□ -0.26
ATG3-204ENST00000467275 PSEN2P49810 448 aa13.43□□□□□ -0.26
ATG3-204ENST00000467275 FOSBP53539 338 aa13.43□□□□□ -0.26
ATG3-204ENST00000467275 RNF166Q96A37 237 aaPredicted RBP13.42□□□□□ -0.26
ATG3-204ENST00000467275 WDR70Q9NW82 654 aa13.42□□□□□ -0.26
ATG3-204ENST00000467275 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
ATG3-204ENST00000467275 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
ATG3-204ENST00000467275 DPYSL4O14531 572 aa13.4□□□□□ -0.26
ATG3-204ENST00000467275 DMRTA1Q5VZB9 504 aa13.39□□□□□ -0.27
ATG3-204ENST00000467275 ADGRD1Q6QNK2 874 aa13.38□□□□□ -0.27
ATG3-204ENST00000467275 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
ATG3-204ENST00000467275 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
ATG3-204ENST00000467275 TK2O00142 265 aa13.35□□□□□ -0.27
ATG3-204ENST00000467275 PTPREP23469 700 aa13.34□□□□□ -0.27
ATG3-204ENST00000467275 E2F4Q16254 413 aa13.34□□□□□ -0.27
ATG3-204ENST00000467275 ADAM33Q9BZ11 813 aa13.32□□□□□ -0.28
ATG3-204ENST00000467275 PCDHGA10Q9Y5H3 936 aa13.32□□□□□ -0.28
ATG3-204ENST00000467275 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
ATG3-204ENST00000467275 PHF14O94880 888 aa13.3□□□□□ -0.28
ATG3-204ENST00000467275 STAC3Q96MF2 364 aa13.29□□□□□ -0.28
ATG3-204ENST00000467275 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
ATG3-204ENST00000467275 FBXW7Q969H0 707 aa13.28□□□□□ -0.28
ATG3-204ENST00000467275 HRO43593 1189 aa13.26□□□□□ -0.29
ATG3-204ENST00000467275 PDIA6Q15084 440 aa13.25□□□□□ -0.29
ATG3-204ENST00000467275 DDX12PQ92771 950 aa13.25□□□□□ -0.29
ATG3-204ENST00000467275 EPAS1Q99814 870 aa13.25□□□□□ -0.29
ATG3-204ENST00000467275 VPS9D1Q9Y2B5 631 aa13.25□□□□□ -0.29
ATG3-204ENST00000467275 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
ATG3-204ENST00000467275 SLC4A5Q9BY07 1137 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms