RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 DNMT1P26358 1616 aaKnown RBP21.24■□□□□ 0.99
CHD1L-205ENST00000467213 ARID4BQ4LE39 1312 aaPredicted RBP21.24■□□□□ 0.99
CHD1L-205ENST00000467213 EPRSP07814 1512 aaKnown RBP21.23■□□□□ 0.99
CHD1L-205ENST00000467213 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
CHD1L-205ENST00000467213 IRX6P78412 446 aaPredicted RBP21.21■□□□□ 0.99
CHD1L-205ENST00000467213 L3MBTL2Q969R5 705 aa21.21■□□□□ 0.99
CHD1L-205ENST00000467213 MRS2Q9HD23 443 aa21.2■□□□□ 0.98
CHD1L-205ENST00000467213 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
CHD1L-205ENST00000467213 WDR62O43379 1518 aa21.19■□□□□ 0.98
CHD1L-205ENST00000467213 MBD5Q9P267 1494 aa21.18■□□□□ 0.98
CHD1L-205ENST00000467213 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
CHD1L-205ENST00000467213 C11orf95C9JLR9 678 aaPredicted RBP21.17■□□□□ 0.98
CHD1L-205ENST00000467213 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
CHD1L-205ENST00000467213 IQGAP2Q13576 1575 aa21.15■□□□□ 0.98
CHD1L-205ENST00000467213 DAPK1P53355 1430 aa21.15■□□□□ 0.98
CHD1L-205ENST00000467213 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.98
CHD1L-205ENST00000467213 DHX29Q7Z478 1369 aaKnown RBP21.14■□□□□ 0.97
CHD1L-205ENST00000467213 KIF14Q15058 1648 aa21.13■□□□□ 0.97
CHD1L-205ENST00000467213 NUDCQ9Y266 331 aa21.13■□□□□ 0.97
CHD1L-205ENST00000467213 DEKP35659 375 aaKnown RBP21.13■□□□□ 0.97
CHD1L-205ENST00000467213 B4GALNT3Q6L9W6 998 aa21.13■□□□□ 0.97
CHD1L-205ENST00000467213 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
CHD1L-205ENST00000467213 FAM9BQ8IZU0 186 aa21.11■□□□□ 0.97
CHD1L-205ENST00000467213 ROCK2O75116 1388 aaKnown RBP21.1■□□□□ 0.97
CHD1L-205ENST00000467213 ADGBQ8N7X0 1667 aa21.1■□□□□ 0.97
CHD1L-205ENST00000467213 NBPF8Q3BBV2 869 aa21.09■□□□□ 0.97
CHD1L-205ENST00000467213 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
CHD1L-205ENST00000467213 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
CHD1L-205ENST00000467213 ABCC5O15440 1437 aa21.08■□□□□ 0.96
CHD1L-205ENST00000467213 KDM5CP41229 1560 aa21.07■□□□□ 0.96
CHD1L-205ENST00000467213 IPO9Q96P70 1041 aaKnown RBP21.06■□□□□ 0.96
CHD1L-205ENST00000467213 BCORL1Q5H9F3 1711 aa21.05■□□□□ 0.96
CHD1L-205ENST00000467213 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
CHD1L-205ENST00000467213 UHRF1BP1Q6BDS2 1440 aa21.04■□□□□ 0.96
CHD1L-205ENST00000467213 PZPP20742 1482 aa21.04■□□□□ 0.96
CHD1L-205ENST00000467213 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
CHD1L-205ENST00000467213 ADGRL2O95490 1459 aa21.03■□□□□ 0.96
CHD1L-205ENST00000467213 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
CHD1L-205ENST00000467213 ANP32AP39687 249 aaKnown RBP21.02■□□□□ 0.96
CHD1L-205ENST00000467213 CDK13Q14004 1512 aaKnown RBP21.02■□□□□ 0.96
CHD1L-205ENST00000467213 ITSN2Q9NZM3 1697 aa21.01■□□□□ 0.95
CHD1L-205ENST00000467213 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
CHD1L-205ENST00000467213 CROCC2H7BZ55 1655 aa21.01■□□□□ 0.95
CHD1L-205ENST00000467213 ARHGEF12Q9NZN5 1544 aa21■□□□□ 0.95
CHD1L-205ENST00000467213 LRPPRCP42704 1394 aaKnown RBP21■□□□□ 0.95
CHD1L-205ENST00000467213 KIAA1107Q9UPP5 1409 aa20.99■□□□□ 0.95
CHD1L-205ENST00000467213 RALGAPBQ86X10 1494 aa20.99■□□□□ 0.95
CHD1L-205ENST00000467213 E9PCH4 1651 aa20.98■□□□□ 0.95
CHD1L-205ENST00000467213 CCDC136Q96JN2 1154 aa20.97■□□□□ 0.95
CHD1L-205ENST00000467213 ADCY10Q96PN6 1610 aa20.97■□□□□ 0.95
CHD1L-205ENST00000467213 ZMYM4Q5VZL5 1548 aa20.96■□□□□ 0.95
CHD1L-205ENST00000467213 INSRP06213 1382 aa20.96■□□□□ 0.95
CHD1L-205ENST00000467213 USP47Q96K76 1375 aa20.96■□□□□ 0.95
CHD1L-205ENST00000467213 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
CHD1L-205ENST00000467213 BRD4O60885 1362 aaPredicted RBP20.95■□□□□ 0.94
CHD1L-205ENST00000467213 PAK3O75914 559 aaPredicted RBP20.94■□□□□ 0.94
CHD1L-205ENST00000467213 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
CHD1L-205ENST00000467213 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
CHD1L-205ENST00000467213 SLC4A1APQ9BWU0 796 aaKnown RBP20.92■□□□□ 0.94
CHD1L-205ENST00000467213 KIF15Q9NS87 1388 aa20.92■□□□□ 0.94
CHD1L-205ENST00000467213 KDM5DQ9BY66 1539 aa20.92■□□□□ 0.94
CHD1L-205ENST00000467213 ZBTB47Q9UFB7 747 aaPredicted RBP20.91■□□□□ 0.94
CHD1L-205ENST00000467213 USP35Q9P2H5 1018 aa20.91■□□□□ 0.94
CHD1L-205ENST00000467213 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
CHD1L-205ENST00000467213 MS4A1P11836 297 aa20.89■□□□□ 0.93
CHD1L-205ENST00000467213 NUP153P49790 1475 aaKnown RBP20.89■□□□□ 0.93
CHD1L-205ENST00000467213 FOXD1Q16676 465 aa20.88■□□□□ 0.93
CHD1L-205ENST00000467213 CAMSAP2Q08AD1 1489 aa20.87■□□□□ 0.93
CHD1L-205ENST00000467213 PDE3BQ13370 1112 aa20.87■□□□□ 0.93
CHD1L-205ENST00000467213 RALBP1Q15311 655 aa20.87■□□□□ 0.93
CHD1L-205ENST00000467213 RTL5Q5HYW3 569 aaPredicted RBP20.86■□□□□ 0.93
CHD1L-205ENST00000467213 KIAA0586Q9BVV6 1533 aa20.86■□□□□ 0.93
CHD1L-205ENST00000467213 SHANK2Q9UPX8 1470 aa20.85■□□□□ 0.93
CHD1L-205ENST00000467213 DISP1Q96F81 1524 aa20.85■□□□□ 0.93
CHD1L-205ENST00000467213 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
CHD1L-205ENST00000467213 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.93
CHD1L-205ENST00000467213 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
CHD1L-205ENST00000467213 RRP1P56182 461 aaKnown RBP20.81■□□□□ 0.92
CHD1L-205ENST00000467213 TMC1Q8TDI8 760 aa20.8■□□□□ 0.92
CHD1L-205ENST00000467213 LAMC1P11047 1609 aa20.79■□□□□ 0.92
CHD1L-205ENST00000467213 ANKRD30AQ9BXX3 1397 aa20.79■□□□□ 0.92
CHD1L-205ENST00000467213 NBR1Q14596 966 aa20.79■□□□□ 0.92
CHD1L-205ENST00000467213 GPATCH8Q9UKJ3 1502 aaKnown RBP20.78■□□□□ 0.92
CHD1L-205ENST00000467213 PTPRGP23470 1445 aa20.76■□□□□ 0.91
CHD1L-205ENST00000467213 PLEKHH2Q8IVE3 1493 aa20.76■□□□□ 0.91
CHD1L-205ENST00000467213 WASHC2CQ9Y4E1 1318 aa20.75■□□□□ 0.91
CHD1L-205ENST00000467213 PARD3Q8TEW0 1356 aa20.74■□□□□ 0.91
CHD1L-205ENST00000467213 PPM1GO15355 546 aaPredicted RBP20.74■□□□□ 0.91
CHD1L-205ENST00000467213 BACH2Q9BYV9 841 aa20.74■□□□□ 0.91
CHD1L-205ENST00000467213 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
CHD1L-205ENST00000467213 ZNF644Q9H582 1327 aaPredicted RBP20.72■□□□□ 0.91
CHD1L-205ENST00000467213 CDC42BPAQ5VT25 1732 aa20.72■□□□□ 0.91
CHD1L-205ENST00000467213 RCAN3Q9UKA8 241 aa20.71■□□□□ 0.91
CHD1L-205ENST00000467213 TRPM1Q7Z4N2 1603 aa20.7■□□□□ 0.9
CHD1L-205ENST00000467213 PDE4AP27815 886 aa20.7■□□□□ 0.9
CHD1L-205ENST00000467213 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
CHD1L-205ENST00000467213 PKD2Q13563 968 aa20.69■□□□□ 0.9
CHD1L-205ENST00000467213 BLMP54132 1417 aaPredicted RBP20.69■□□□□ 0.9
CHD1L-205ENST00000467213 ARHGEF5Q12774 1597 aa20.68■□□□□ 0.9
CHD1L-205ENST00000467213 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms