RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
CD55-207ENST00000465534 GPR153Q6NV75 609 aa9.85□□□□□ -0.83
CD55-207ENST00000465534 ZNF687Q8N1G0 1237 aa9.82□□□□□ -0.84
CD55-207ENST00000465534 ARSIQ5FYB1 569 aa9.81□□□□□ -0.84
CD55-207ENST00000465534 RNF166Q96A37 237 aaPredicted RBP9.81□□□□□ -0.84
CD55-207ENST00000465534 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
CD55-207ENST00000465534 NLRP6P59044 892 aa9.8□□□□□ -0.84
CD55-207ENST00000465534 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
CD55-207ENST00000465534 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
CD55-207ENST00000465534 KHSRPQ92945 711 aaKnown RBP eCLIP9.78□□□□□ -0.848e-7■■■□□ 16.5
CD55-207ENST00000465534 MYT1LQ9UL68 1186 aa9.78□□□□□ -0.84
CD55-207ENST00000465534 TAOK2Q9UL54 1235 aa9.76□□□□□ -0.85
CD55-207ENST00000465534 MFRPQ9BY79 579 aa9.75□□□□□ -0.85
CD55-207ENST00000465534 ZNF316A6NFI3 1004 aaPredicted RBP9.73□□□□□ -0.85
CD55-207ENST00000465534 STK25O00506 426 aa9.72□□□□□ -0.85
CD55-207ENST00000465534 ANKRD13DQ6ZTN6 518 aa9.72□□□□□ -0.85
CD55-207ENST00000465534 C2orf72A6NCS6 295 aa9.7□□□□□ -0.86
CD55-207ENST00000465534 KIF3CO14782 793 aa9.69□□□□□ -0.86
CD55-207ENST00000465534 ECM2O94769 699 aaPredicted RBP9.69□□□□□ -0.86
CD55-207ENST00000465534 NUDT7P0C024 238 aa9.67□□□□□ -0.86
CD55-207ENST00000465534 PTGER2P43116 358 aa9.67□□□□□ -0.86
CD55-207ENST00000465534 LSM11P83369 360 aaKnown RBP eCLIP9.65□□□□□ -0.87
CD55-207ENST00000465534 RGL2O15211 777 aa9.62□□□□□ -0.87
CD55-207ENST00000465534 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
CD55-207ENST00000465534 PCDHGA4Q9Y5G9 962 aa9.62□□□□□ -0.87
CD55-207ENST00000465534 TMC2Q8TDI7 906 aa9.61□□□□□ -0.87
CD55-207ENST00000465534 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
CD55-207ENST00000465534 SLC34A2O95436 690 aa9.59□□□□□ -0.87
CD55-207ENST00000465534 PKD2Q13563 968 aa9.59□□□□□ -0.87
CD55-207ENST00000465534 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
CD55-207ENST00000465534 PBX2P40425 430 aa9.59□□□□□ -0.87
CD55-207ENST00000465534 PPP1R37O75864 691 aa9.58□□□□□ -0.88
CD55-207ENST00000465534 ARHGAP33O14559 1287 aa9.49□□□□□ -0.89
CD55-207ENST00000465534 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
CD55-207ENST00000465534 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
CD55-207ENST00000465534 PSDA5PKW4 1024 aaPredicted RBP9.47□□□□□ -0.89
CD55-207ENST00000465534 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
CD55-207ENST00000465534 PLPP6Q8IY26 295 aa9.46□□□□□ -0.9
CD55-207ENST00000465534 HCSTQ9UBK5 93 aa9.46□□□□□ -0.9
CD55-207ENST00000465534 PSEN2P49810 448 aa9.45□□□□□ -0.9
CD55-207ENST00000465534 FOXK1P85037 733 aa9.45□□□□□ -0.9
CD55-207ENST00000465534 DMRTA1Q5VZB9 504 aa9.45□□□□□ -0.9
CD55-207ENST00000465534 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
CD55-207ENST00000465534 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
CD55-207ENST00000465534 DSG2Q14126 1118 aa9.42□□□□□ -0.9
CD55-207ENST00000465534 TK2O00142 265 aa9.4□□□□□ -0.9
CD55-207ENST00000465534 HRO43593 1189 aa9.4□□□□□ -0.9
CD55-207ENST00000465534 PPP4R3BQ5MIZ7 849 aa9.4□□□□□ -0.9
CD55-207ENST00000465534 HS6ST3Q8IZP7 471 aa9.4□□□□□ -0.91
CD55-207ENST00000465534 TBC1D12O60347 775 aa9.39□□□□□ -0.91
CD55-207ENST00000465534 KCTD12Q96CX2 325 aaKnown RBP9.36□□□□□ -0.91
CD55-207ENST00000465534 CHGAP10645 457 aaKnown RBP9.35□□□□□ -0.91
CD55-207ENST00000465534 KCNK17Q96T54 332 aa9.35□□□□□ -0.91
CD55-207ENST00000465534 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
CD55-207ENST00000465534 UPF1Q92900 1129 aaKnown RBP eCLIP9.34□□□□□ -0.91
CD55-207ENST00000465534 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
CD55-207ENST00000465534 OXER1Q8TDS5 423 aa9.31□□□□□ -0.92
CD55-207ENST00000465534 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
CD55-207ENST00000465534 NKX1-1Q15270 411 aaPredicted RBP9.29□□□□□ -0.92
CD55-207ENST00000465534 VPS9D1Q9Y2B5 631 aa9.29□□□□□ -0.92
CD55-207ENST00000465534 PTPN5P54829 565 aa9.28□□□□□ -0.92
CD55-207ENST00000465534 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
CD55-207ENST00000465534 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
CD55-207ENST00000465534 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
CD55-207ENST00000465534 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
CD55-207ENST00000465534 FOSBP53539 338 aa9.23□□□□□ -0.93
CD55-207ENST00000465534 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
CD55-207ENST00000465534 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
CD55-207ENST00000465534 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
CD55-207ENST00000465534 PTPREP23469 700 aa9.21□□□□□ -0.93
CD55-207ENST00000465534 PDE4AP27815 886 aa9.21□□□□□ -0.94
CD55-207ENST00000465534 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
CD55-207ENST00000465534 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
CD55-207ENST00000465534 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
CD55-207ENST00000465534 EVI5O60447 810 aa9.19□□□□□ -0.94
CD55-207ENST00000465534 THSD4Q6ZMP0 1018 aa9.19□□□□□ -0.94
CD55-207ENST00000465534 ANO8Q9HCE9 1232 aaPredicted RBP9.19□□□□□ -0.94
CD55-207ENST00000465534 JPH4Q96JJ6 628 aa9.18□□□□□ -0.94
CD55-207ENST00000465534 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
CD55-207ENST00000465534 ZDHHC16Q969W1 377 aa9.17□□□□□ -0.94
CD55-207ENST00000465534 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
CD55-207ENST00000465534 WNT2BQ93097 391 aa9.16□□□□□ -0.94
CD55-207ENST00000465534 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.94
CD55-207ENST00000465534 DDX27Q96GQ7 796 aaKnown RBP9.14□□□□□ -0.95
CD55-207ENST00000465534 GTPBP6O43824 516 aaPredicted RBP9.13□□□□□ -0.95
CD55-207ENST00000465534 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
CD55-207ENST00000465534 IFFO2Q5TF58 517 aa9.13□□□□□ -0.95
CD55-207ENST00000465534 NBPF3Q9H094 633 aa9.13□□□□□ -0.95
CD55-207ENST00000465534 A0A0G2JS52 829 aa9.09□□□□□ -0.95
CD55-207ENST00000465534 RGS20O76081 388 aa9.09□□□□□ -0.95
CD55-207ENST00000465534 MFSD10Q14728 455 aa9.08□□□□□ -0.96
CD55-207ENST00000465534 EMILIN3Q9NT22 766 aa9.08□□□□□ -0.96
CD55-207ENST00000465534 PCDHGA10Q9Y5H3 936 aa9.08□□□□□ -0.96
CD55-207ENST00000465534 PPP1R3GB7ZBB8 358 aa9.08□□□□□ -0.96
CD55-207ENST00000465534 PROX2Q3B8N5 592 aa9.08□□□□□ -0.96
CD55-207ENST00000465534 COL9A1P20849 921 aa9.06□□□□□ -0.96
CD55-207ENST00000465534 IRX2Q9BZI1 471 aaPredicted RBP9.06□□□□□ -0.96
CD55-207ENST00000465534 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
CD55-207ENST00000465534 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
CD55-207ENST00000465534 BCAMP50895 628 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms