RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
TRA2B-208ENST00000465245 PREX1Q8TCU6 1659 aa20.24■□□□□ 0.83
TRA2B-208ENST00000465245 SCAPERQ9BY12 1400 aa20.23■□□□□ 0.83
TRA2B-208ENST00000465245 PLCH2O75038 1416 aa20.21■□□□□ 0.83
TRA2B-208ENST00000465245 ARHGEF12Q9NZN5 1544 aa20.21■□□□□ 0.83
TRA2B-208ENST00000465245 CERKQ8TCT0 537 aa20.2■□□□□ 0.82
TRA2B-208ENST00000465245 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
TRA2B-208ENST00000465245 ATP10AO60312 1499 aa20.18■□□□□ 0.82
TRA2B-208ENST00000465245 KIF14Q15058 1648 aa20.13■□□□□ 0.81
TRA2B-208ENST00000465245 ZNF518AQ6AHZ1 1483 aa20.12■□□□□ 0.81
TRA2B-208ENST00000465245 STRCQ7RTU9 1775 aa20.12■□□□□ 0.81
TRA2B-208ENST00000465245 EFCAB2Q5VUJ9 269 aa20.11■□□□□ 0.81
TRA2B-208ENST00000465245 ATP1B4Q9UN42 357 aaPredicted RBP20.11■□□□□ 0.81
TRA2B-208ENST00000465245 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
TRA2B-208ENST00000465245 KDM5CP41229 1560 aa20.1■□□□□ 0.81
TRA2B-208ENST00000465245 ARHGAP5Q13017 1502 aa20.09■□□□□ 0.81
TRA2B-208ENST00000465245 SETD1BQ9UPS6 1966 aaKnown RBP20.09■□□□□ 0.81
TRA2B-208ENST00000465245 CEBPAP49715 358 aaPredicted RBP20.09■□□□□ 0.81
TRA2B-208ENST00000465245 DIP2CQ9Y2E4 1556 aa20.08■□□□□ 0.8
TRA2B-208ENST00000465245 CDK11AQ9UQ88 783 aaPredicted RBP20.07■□□□□ 0.8
TRA2B-208ENST00000465245 UHRF1BP1Q6BDS2 1440 aa20.07■□□□□ 0.8
TRA2B-208ENST00000465245 LRRIQ1Q96JM4 1722 aa20.06■□□□□ 0.8
TRA2B-208ENST00000465245 C3P01024 1663 aa20.05■□□□□ 0.8
TRA2B-208ENST00000465245 ABCA6Q8N139 1617 aa20.05■□□□□ 0.8
TRA2B-208ENST00000465245 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
TRA2B-208ENST00000465245 CDC42BPBQ9Y5S2 1711 aa20.05■□□□□ 0.8
TRA2B-208ENST00000465245 REREQ9P2R6 1566 aa20.04■□□□□ 0.8
TRA2B-208ENST00000465245 CLIP1P30622 1438 aa20.04■□□□□ 0.8
TRA2B-208ENST00000465245 TROQ12816 1431 aaPredicted RBP20.04■□□□□ 0.8
TRA2B-208ENST00000465245 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
TRA2B-208ENST00000465245 MYT1LQ9UL68 1186 aa20.03■□□□□ 0.8
TRA2B-208ENST00000465245 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
TRA2B-208ENST00000465245 AFAP1Q8N556 730 aa20.02■□□□□ 0.8
TRA2B-208ENST00000465245 UBTFP17480 764 aaKnown RBP20.01■□□□□ 0.79
TRA2B-208ENST00000465245 DISP3Q9P2K9 1392 aa20■□□□□ 0.79
TRA2B-208ENST00000465245 PREX2Q70Z35 1606 aa20■□□□□ 0.79
TRA2B-208ENST00000465245 ITSN2Q9NZM3 1697 aa19.99■□□□□ 0.79
TRA2B-208ENST00000465245 MLH3Q9UHC1 1453 aa19.98■□□□□ 0.79
TRA2B-208ENST00000465245 ABCC1P33527 1531 aa19.97■□□□□ 0.79
TRA2B-208ENST00000465245 AGLP35573 1532 aa19.96■□□□□ 0.79
TRA2B-208ENST00000465245 PTPRTO14522 1441 aa19.95■□□□□ 0.78
TRA2B-208ENST00000465245 KIDINS220Q9ULH0 1771 aa19.93■□□□□ 0.78
TRA2B-208ENST00000465245 SPATA31D1Q6ZQQ2 1576 aa19.93■□□□□ 0.78
TRA2B-208ENST00000465245 ESF1Q9H501 851 aaKnown RBP19.93■□□□□ 0.78
TRA2B-208ENST00000465245 TRAPPC8Q9Y2L5 1435 aa19.93■□□□□ 0.78
TRA2B-208ENST00000465245 ILDR2Q71H61 639 aa19.92■□□□□ 0.78
TRA2B-208ENST00000465245 CDC42BPAQ5VT25 1732 aa19.92■□□□□ 0.78
TRA2B-208ENST00000465245 MROH2AA6NES4 1674 aa19.89■□□□□ 0.77
TRA2B-208ENST00000465245 CCDC18Q5T9S5 1454 aa19.89■□□□□ 0.77
TRA2B-208ENST00000465245 LTBP4Q8N2S1 1624 aa19.89■□□□□ 0.77
TRA2B-208ENST00000465245 CNTLNQ9NXG0 1405 aa19.89■□□□□ 0.77
TRA2B-208ENST00000465245 SOCS7O14512 581 aa19.88■□□□□ 0.77
TRA2B-208ENST00000465245 NCOA1Q15788 1441 aa19.87■□□□□ 0.77
TRA2B-208ENST00000465245 IQSEC2Q5JU85 1478 aa19.86■□□□□ 0.77
TRA2B-208ENST00000465245 CAMSAP1Q5T5Y3 1602 aa19.84■□□□□ 0.77
TRA2B-208ENST00000465245 SAMD9LQ8IVG5 1584 aa19.84■□□□□ 0.77
TRA2B-208ENST00000465245 SUPT6HQ7KZ85 1726 aaKnown RBP19.84■□□□□ 0.77
TRA2B-208ENST00000465245 CASKIN1Q8WXD9 1431 aa19.84■□□□□ 0.77
TRA2B-208ENST00000465245 SYCP2Q9BX26 1530 aa19.81■□□□□ 0.76
TRA2B-208ENST00000465245 NPATQ14207 1427 aa19.81■□□□□ 0.76
TRA2B-208ENST00000465245 CLTCQ00610 1675 aaKnown RBP19.8■□□□□ 0.76
TRA2B-208ENST00000465245 ZNF142P52746 1687 aaPredicted RBP19.79■□□□□ 0.76
TRA2B-208ENST00000465245 MYO3AQ8NEV4 1616 aa19.79■□□□□ 0.76
TRA2B-208ENST00000465245 ZNF777Q9ULD5 760 aaPredicted RBP19.77■□□□□ 0.76
TRA2B-208ENST00000465245 FYCO1Q9BQS8 1478 aa19.77■□□□□ 0.76
TRA2B-208ENST00000465245 ATP7AQ04656 1500 aa19.76■□□□□ 0.75
TRA2B-208ENST00000465245 ZMYM3Q14202 1370 aa19.76■□□□□ 0.75
TRA2B-208ENST00000465245 PLXNC1O60486 1568 aa19.75■□□□□ 0.75
TRA2B-208ENST00000465245 INO80Q9ULG1 1556 aaPredicted RBP19.75■□□□□ 0.75
TRA2B-208ENST00000465245 SPAG9O60271 1321 aaKnown RBP19.75■□□□□ 0.75
TRA2B-208ENST00000465245 GPATCH8Q9UKJ3 1502 aaKnown RBP19.73■□□□□ 0.75
TRA2B-208ENST00000465245 CEP170BQ9Y4F5 1589 aaPredicted RBP19.73■□□□□ 0.75
TRA2B-208ENST00000465245 PLA2R1Q13018 1463 aa19.72■□□□□ 0.75
TRA2B-208ENST00000465245 NCKAP5LQ9HCH0 1330 aa19.72■□□□□ 0.75
TRA2B-208ENST00000465245 HNRNPMP52272 730 aaKnown RBP eCLIP19.71■□□□□ 0.756e-8■■■■□ 22.7
TRA2B-208ENST00000465245 A2MP01023 1474 aa19.71■□□□□ 0.75
TRA2B-208ENST00000465245 ZNF335Q9H4Z2 1342 aaPredicted RBP19.71■□□□□ 0.75
TRA2B-208ENST00000465245 ADGBQ8N7X0 1667 aa19.69■□□□□ 0.74
TRA2B-208ENST00000465245 PLEKHH2Q8IVE3 1493 aa19.69■□□□□ 0.74
TRA2B-208ENST00000465245 UBAP1LF5GYI3 381 aa19.68■□□□□ 0.74
TRA2B-208ENST00000465245 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
TRA2B-208ENST00000465245 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
TRA2B-208ENST00000465245 KIAA1107Q9UPP5 1409 aa19.68■□□□□ 0.74
TRA2B-208ENST00000465245 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
TRA2B-208ENST00000465245 PKD2Q13563 968 aa19.66■□□□□ 0.74
TRA2B-208ENST00000465245 GGT6Q6P531 493 aa19.65■□□□□ 0.74
TRA2B-208ENST00000465245 CFDP1Q9UEE9 299 aaPredicted RBP19.65■□□□□ 0.74
TRA2B-208ENST00000465245 CCNB3Q8WWL7 1395 aa19.64■□□□□ 0.73
TRA2B-208ENST00000465245 POLR1AO95602 1720 aaPredicted RBP19.63■□□□□ 0.73
TRA2B-208ENST00000465245 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
TRA2B-208ENST00000465245 DNMT1P26358 1616 aaKnown RBP19.61■□□□□ 0.73
TRA2B-208ENST00000465245 A2ML1A8K2U0 1454 aa19.6■□□□□ 0.73
TRA2B-208ENST00000465245 MTUS2Q5JR59 1369 aa19.59■□□□□ 0.73
TRA2B-208ENST00000465245 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
TRA2B-208ENST00000465245 NEURL4Q96JN8 1562 aa19.55■□□□□ 0.72
TRA2B-208ENST00000465245 EHBP1L1Q8N3D4 1523 aa19.54■□□□□ 0.72
TRA2B-208ENST00000465245 MBD5Q9P267 1494 aa19.54■□□□□ 0.72
TRA2B-208ENST00000465245 CPS1P31327 1500 aa19.53■□□□□ 0.72
TRA2B-208ENST00000465245 MED1Q15648 1581 aaPredicted RBP19.53■□□□□ 0.72
TRA2B-208ENST00000465245 ZNF644Q9H582 1327 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms