RNA–Protein interactions for RNA: ENST00000464889.5

PCMT1-205, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-205ENST00000464889 PTPRKQ15262 1439 aa29.59■■■□□ 2.33
PCMT1-205ENST00000464889 CENPBP07199 599 aaPredicted RBP29.58■■■□□ 2.33
PCMT1-205ENST00000464889 ACIN1Q9UKV3 1341 aaKnown RBP29.58■■■□□ 2.33
PCMT1-205ENST00000464889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.56■■■□□ 2.326e-9■□□□□ 10.1
PCMT1-205ENST00000464889 TTC37Q6PGP7 1564 aa29.54■■■□□ 2.32
PCMT1-205ENST00000464889 GPATCH8Q9UKJ3 1502 aaKnown RBP29.54■■■□□ 2.32
PCMT1-205ENST00000464889 SCAF1Q9H7N4 1312 aaKnown RBP29.53■■■□□ 2.32
PCMT1-205ENST00000464889 MIA2Q96PC5 1412 aa29.52■■■□□ 2.32
PCMT1-205ENST00000464889 MIER1Q8N108 512 aa29.51■■■□□ 2.31
PCMT1-205ENST00000464889 ITSN2Q9NZM3 1697 aa29.51■■■□□ 2.31
PCMT1-205ENST00000464889 CDC42BPAQ5VT25 1732 aa29.51■■■□□ 2.31
PCMT1-205ENST00000464889 NAIPQ13075 1403 aa29.5■■■□□ 2.31
PCMT1-205ENST00000464889 TIMELESSQ9UNS1 1208 aa29.5■■■□□ 2.31
PCMT1-205ENST00000464889 CFDP1Q9UEE9 299 aaPredicted RBP29.49■■■□□ 2.31
PCMT1-205ENST00000464889 GCC2Q8IWJ2 1684 aa29.48■■■□□ 2.31
PCMT1-205ENST00000464889 NEUROD1Q13562 356 aa29.47■■■□□ 2.31
PCMT1-205ENST00000464889 AKNAQ7Z591 1439 aa29.46■■■□□ 2.31
PCMT1-205ENST00000464889 MYO5CQ9NQX4 1742 aa29.44■■■□□ 2.3
PCMT1-205ENST00000464889 ABCA9Q8IUA7 1624 aa29.43■■■□□ 2.3
PCMT1-205ENST00000464889 ZNF777Q9ULD5 760 aaPredicted RBP29.43■■■□□ 2.3
PCMT1-205ENST00000464889 PREX2Q70Z35 1606 aa29.42■■■□□ 2.3
PCMT1-205ENST00000464889 CDC42BPBQ9Y5S2 1711 aa29.42■■■□□ 2.3
PCMT1-205ENST00000464889 ZNF644Q9H582 1327 aaPredicted RBP29.4■■■□□ 2.3
PCMT1-205ENST00000464889 SIN3AQ96ST3 1273 aa29.39■■■□□ 2.29
PCMT1-205ENST00000464889 ARHGAP5Q13017 1502 aa29.38■■■□□ 2.29
PCMT1-205ENST00000464889 PLCH2O75038 1416 aa29.38■■■□□ 2.29
PCMT1-205ENST00000464889 CAMSAP2Q08AD1 1489 aa29.35■■■□□ 2.29
PCMT1-205ENST00000464889 FAM69CQ0P6D2 419 aa29.32■■■□□ 2.28
PCMT1-205ENST00000464889 CD109Q6YHK3 1445 aa29.31■■■□□ 2.28
PCMT1-205ENST00000464889 DIP2BQ9P265 1576 aa29.31■■■□□ 2.28
PCMT1-205ENST00000464889 EFCAB2Q5VUJ9 269 aa29.3■■■□□ 2.28
PCMT1-205ENST00000464889 DNMT1P26358 1616 aaKnown RBP29.29■■■□□ 2.28
PCMT1-205ENST00000464889 GLI2P10070 1586 aa29.29■■■□□ 2.28
PCMT1-205ENST00000464889 ARAP3Q8WWN8 1544 aa29.29■■■□□ 2.28
PCMT1-205ENST00000464889 SAMD9LQ8IVG5 1584 aa29.28■■■□□ 2.28
PCMT1-205ENST00000464889 FANCAO15360 1455 aa29.24■■■□□ 2.27
PCMT1-205ENST00000464889 MAP3K4Q9Y6R4 1608 aa29.24■■■□□ 2.27
PCMT1-205ENST00000464889 DAPK1P53355 1430 aa29.23■■■□□ 2.27
PCMT1-205ENST00000464889 ROCK1Q13464 1354 aa29.22■■■□□ 2.27
PCMT1-205ENST00000464889 TONSLQ96HA7 1378 aa29.22■■■□□ 2.27
PCMT1-205ENST00000464889 PPP1R15AO75807 674 aaPredicted RBP29.22■■■□□ 2.27
PCMT1-205ENST00000464889 HNRNPMP52272 730 aaKnown RBP eCLIP29.21■■■□□ 2.27
PCMT1-205ENST00000464889 RRP7BPQ9NSQ0 103 aa29.21■■■□□ 2.27
PCMT1-205ENST00000464889 KDM6BO15054 1643 aa29.2■■■□□ 2.27
PCMT1-205ENST00000464889 YTHDC1Q96MU7 727 aaKnown RBP29.2■■■□□ 2.26
PCMT1-205ENST00000464889 KIF13AQ9H1H9 1805 aa29.19■■■□□ 2.26
PCMT1-205ENST00000464889 CHIC2Q9UKJ5 165 aa29.19■■■□□ 2.26
PCMT1-205ENST00000464889 SYCP2Q9BX26 1530 aa29.18■■■□□ 2.26
PCMT1-205ENST00000464889 ABCC5O15440 1437 aa29.18■■■□□ 2.26
PCMT1-205ENST00000464889 PLEKHH2Q8IVE3 1493 aa29.17■■■□□ 2.26
PCMT1-205ENST00000464889 MBD5Q9P267 1494 aa29.16■■■□□ 2.26
PCMT1-205ENST00000464889 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
PCMT1-205ENST00000464889 ABCC1P33527 1531 aa29.14■■■□□ 2.26
PCMT1-205ENST00000464889 TSPOAP1O95153 1857 aa29.14■■■□□ 2.25
PCMT1-205ENST00000464889 ARHGEF12Q9NZN5 1544 aa29.13■■■□□ 2.25
PCMT1-205ENST00000464889 DENND4BO75064 1496 aaPredicted RBP29.13■■■□□ 2.25
PCMT1-205ENST00000464889 ARHGEF5Q12774 1597 aa29.12■■■□□ 2.25
PCMT1-205ENST00000464889 CFAP74Q9C0B2 1584 aa29.12■■■□□ 2.25
PCMT1-205ENST00000464889 ADGRL1O94910 1474 aa29.11■■■□□ 2.25
PCMT1-205ENST00000464889 GTF3C3Q9Y5Q9 886 aa29.1■■■□□ 2.25
PCMT1-205ENST00000464889 CCDC141Q6ZP82 1450 aa29.09■■■□□ 2.25
PCMT1-205ENST00000464889 RSPH4AQ5TD94 716 aa29.09■■■□□ 2.25
PCMT1-205ENST00000464889 CROCC2H7BZ55 1655 aa29.09■■■□□ 2.25
PCMT1-205ENST00000464889 ADGBQ8N7X0 1667 aa29.09■■■□□ 2.25
PCMT1-205ENST00000464889 NEO1Q92859 1461 aa29.07■■■□□ 2.24
PCMT1-205ENST00000464889 SCAPERQ9BY12 1400 aa29.07■■■□□ 2.24
PCMT1-205ENST00000464889 TSPY4P0CV99 314 aa29.07■■■□□ 2.24
PCMT1-205ENST00000464889 TSPY10P0CW01 314 aa29.07■■■□□ 2.24
PCMT1-205ENST00000464889 TRHP20396 242 aaPredicted RBP29.06■■■□□ 2.24
PCMT1-205ENST00000464889 PPRC1Q5VV67 1664 aaKnown RBP29.06■■■□□ 2.24
PCMT1-205ENST00000464889 TRAPPC8Q9Y2L5 1435 aa29.05■■■□□ 2.24
PCMT1-205ENST00000464889 TRIM52Q96A61 297 aa29.03■■■□□ 2.24
PCMT1-205ENST00000464889 C9orf84Q5VXU9 1444 aa29.03■■■□□ 2.24
PCMT1-205ENST00000464889 TEX14Q8IWB6 1497 aa29.02■■■□□ 2.24
PCMT1-205ENST00000464889 SHANK2Q9UPX8 1470 aa29.02■■■□□ 2.24
PCMT1-205ENST00000464889 AFAP1Q8N556 730 aa29.01■■■□□ 2.23
PCMT1-205ENST00000464889 ADGRL2O95490 1459 aa29■■■□□ 2.23
PCMT1-205ENST00000464889 MPHOSPH9Q99550 1183 aa28.99■■■□□ 2.23
PCMT1-205ENST00000464889 NCOA1Q15788 1441 aa28.95■■■□□ 2.22
PCMT1-205ENST00000464889 ANKRD30AQ9BXX3 1397 aa28.95■■■□□ 2.22
PCMT1-205ENST00000464889 MAST1Q9Y2H9 1570 aa28.93■■■□□ 2.22
PCMT1-205ENST00000464889 SPAG9O60271 1321 aaKnown RBP28.92■■■□□ 2.22
PCMT1-205ENST00000464889 ZNF518AQ6AHZ1 1483 aa28.92■■■□□ 2.22
PCMT1-205ENST00000464889 POGZQ7Z3K3 1410 aa28.92■■■□□ 2.22
PCMT1-205ENST00000464889 RAPGEF3O95398 923 aa28.9■■■□□ 2.22
PCMT1-205ENST00000464889 MYT1LQ9UL68 1186 aa28.88■■■□□ 2.21
PCMT1-205ENST00000464889 DDX10Q13206 875 aaKnown RBP28.87■■■□□ 2.21
PCMT1-205ENST00000464889 ANKRD30BQ9BXX2 1392 aa28.87■■■□□ 2.21
PCMT1-205ENST00000464889 KIF15Q9NS87 1388 aa28.86■■■□□ 2.21
PCMT1-205ENST00000464889 RPRD2Q5VT52 1461 aaKnown RBP28.86■■■□□ 2.21
PCMT1-205ENST00000464889 ZFYVE16Q7Z3T8 1539 aa28.85■■■□□ 2.21
PCMT1-205ENST00000464889 RTEL1-TNFRSF6BF6WH68 1400 aa28.85■■■□□ 2.21
PCMT1-205ENST00000464889 KDM5CP41229 1560 aa28.84■■■□□ 2.21
PCMT1-205ENST00000464889 RICTORQ6R327 1708 aa28.84■■■□□ 2.21
PCMT1-205ENST00000464889 ATP7AQ04656 1500 aa28.83■■■□□ 2.21
PCMT1-205ENST00000464889 INO80Q9ULG1 1556 aaPredicted RBP28.83■■■□□ 2.21
PCMT1-205ENST00000464889 PZPP20742 1482 aa28.82■■■□□ 2.2
PCMT1-205ENST00000464889 PLXNC1O60486 1568 aa28.82■■■□□ 2.2
PCMT1-205ENST00000464889 HIRIP3Q9BW71 556 aaPredicted RBP28.79■■■□□ 2.2
PCMT1-205ENST00000464889 FRMPD1Q5SYB0 1578 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms