RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 SOX12O15370 315 aa13.29□□□□□ -0.28
CD46-211ENST00000464082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
CD46-211ENST00000464082 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
CD46-211ENST00000464082 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
CD46-211ENST00000464082 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.29
CD46-211ENST00000464082 ARSIQ5FYB1 569 aa13.25□□□□□ -0.29
CD46-211ENST00000464082 KHSRPQ92945 711 aaKnown RBP eCLIP13.22□□□□□ -0.29
CD46-211ENST00000464082 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
CD46-211ENST00000464082 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
CD46-211ENST00000464082 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
CD46-211ENST00000464082 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
CD46-211ENST00000464082 PTGER2P43116 358 aa13.09□□□□□ -0.31
CD46-211ENST00000464082 NLRP6P59044 892 aa13.09□□□□□ -0.31
CD46-211ENST00000464082 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
CD46-211ENST00000464082 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.32
CD46-211ENST00000464082 MFRPQ9BY79 579 aa13.05□□□□□ -0.32
CD46-211ENST00000464082 KIF3CO14782 793 aa13.04□□□□□ -0.32
CD46-211ENST00000464082 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
CD46-211ENST00000464082 NUDT7P0C024 238 aa13.03□□□□□ -0.32
CD46-211ENST00000464082 STK24Q9Y6E0 443 aa13.02□□□□□ -0.33
CD46-211ENST00000464082 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
CD46-211ENST00000464082 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
CD46-211ENST00000464082 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
CD46-211ENST00000464082 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
CD46-211ENST00000464082 STK25O00506 426 aa12.94□□□□□ -0.34
CD46-211ENST00000464082 PBX2P40425 430 aa12.93□□□□□ -0.34
CD46-211ENST00000464082 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
CD46-211ENST00000464082 SLC34A2O95436 690 aa12.9□□□□□ -0.34
CD46-211ENST00000464082 TMC2Q8TDI7 906 aa12.86□□□□□ -0.35
CD46-211ENST00000464082 PLA2G2EQ9NZK7 142 aa12.85□□□□□ -0.35
CD46-211ENST00000464082 PPP1R37O75864 691 aa12.83□□□□□ -0.36
CD46-211ENST00000464082 ECM2O94769 699 aaPredicted RBP12.82□□□□□ -0.36
CD46-211ENST00000464082 ADGRD1Q6QNK2 874 aa12.82□□□□□ -0.36
CD46-211ENST00000464082 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
CD46-211ENST00000464082 HCSTQ9UBK5 93 aa12.81□□□□□ -0.36
CD46-211ENST00000464082 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
CD46-211ENST00000464082 RGL2O15211 777 aa12.79□□□□□ -0.36
CD46-211ENST00000464082 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.37
CD46-211ENST00000464082 PSEN2P49810 448 aa12.76□□□□□ -0.37
CD46-211ENST00000464082 HRO43593 1189 aa12.73□□□□□ -0.37
CD46-211ENST00000464082 PKD2Q13563 968 aa12.73□□□□□ -0.37
CD46-211ENST00000464082 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
CD46-211ENST00000464082 PTCD2Q8WV60 388 aaKnown RBP12.72□□□□□ -0.37
CD46-211ENST00000464082 TK2O00142 265 aa12.69□□□□□ -0.38
CD46-211ENST00000464082 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
CD46-211ENST00000464082 KCTD12Q96CX2 325 aaKnown RBP12.66□□□□□ -0.38
CD46-211ENST00000464082 FOXK1P85037 733 aa12.65□□□□□ -0.38
CD46-211ENST00000464082 DSG2Q14126 1118 aa12.62□□□□□ -0.39
CD46-211ENST00000464082 PPP4R3BQ5MIZ7 849 aa12.61□□□□□ -0.39
CD46-211ENST00000464082 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
CD46-211ENST00000464082 KCNK17Q96T54 332 aa12.6□□□□□ -0.39
CD46-211ENST00000464082 TBC1D12O60347 775 aa12.55□□□□□ -0.4
CD46-211ENST00000464082 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
CD46-211ENST00000464082 VPS9D1Q9Y2B5 631 aa12.54□□□□□ -0.4
CD46-211ENST00000464082 PTPN5P54829 565 aa12.53□□□□□ -0.4
CD46-211ENST00000464082 OXER1Q8TDS5 423 aa12.49□□□□□ -0.41
CD46-211ENST00000464082 UPF1Q92900 1129 aaKnown RBP eCLIP12.48□□□□□ -0.41
CD46-211ENST00000464082 KCNH8Q96L42 1107 aa12.48□□□□□ -0.41
CD46-211ENST00000464082 ZNF454Q8N9F8 522 aa12.47□□□□□ -0.41
CD46-211ENST00000464082 HS6ST3Q8IZP7 471 aa12.46□□□□□ -0.41
CD46-211ENST00000464082 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
CD46-211ENST00000464082 BHMG1C9JSJ3 638 aaPredicted RBP12.43□□□□□ -0.42
CD46-211ENST00000464082 THSD4Q6ZMP0 1018 aa12.41□□□□□ -0.42
CD46-211ENST00000464082 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
CD46-211ENST00000464082 FOSBP53539 338 aa12.4□□□□□ -0.42
CD46-211ENST00000464082 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
CD46-211ENST00000464082 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
CD46-211ENST00000464082 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
CD46-211ENST00000464082 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
CD46-211ENST00000464082 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
CD46-211ENST00000464082 PTPREP23469 700 aa12.36□□□□□ -0.43
CD46-211ENST00000464082 PPP1R15BQ5SWA1 713 aa12.36□□□□□ -0.43
CD46-211ENST00000464082 WNT2BQ93097 391 aa12.36□□□□□ -0.43
CD46-211ENST00000464082 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
CD46-211ENST00000464082 A0A0G2JS52 829 aa12.33□□□□□ -0.44
CD46-211ENST00000464082 GOLGA8CPA6NN73 597 aa12.33□□□□□ -0.44
CD46-211ENST00000464082 RGS20O76081 388 aa12.33□□□□□ -0.44
CD46-211ENST00000464082 IRX2Q9BZI1 471 aaPredicted RBP12.33□□□□□ -0.44
CD46-211ENST00000464082 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
CD46-211ENST00000464082 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
CD46-211ENST00000464082 NCKAP5LQ9HCH0 1330 aa12.32□□□□□ -0.44
CD46-211ENST00000464082 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
CD46-211ENST00000464082 EVI5O60447 810 aa12.29□□□□□ -0.44
CD46-211ENST00000464082 ZDHHC16Q969W1 377 aa12.28□□□□□ -0.44
CD46-211ENST00000464082 DNAJC5Q9H3Z4 198 aa12.25□□□□□ -0.45
CD46-211ENST00000464082 NBPF3Q9H094 633 aa12.24□□□□□ -0.45
CD46-211ENST00000464082 PDE4AP27815 886 aa12.23□□□□□ -0.45
CD46-211ENST00000464082 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
CD46-211ENST00000464082 COL9A1P20849 921 aa12.19□□□□□ -0.46
CD46-211ENST00000464082 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
CD46-211ENST00000464082 RYDENQ9NUL5 291 aaKnown RBP12.18□□□□□ -0.46
CD46-211ENST00000464082 PCDHGA10Q9Y5H3 936 aa12.18□□□□□ -0.46
CD46-211ENST00000464082 MAP3K9P80192 1104 aa12.17□□□□□ -0.46
CD46-211ENST00000464082 RABGEF1Q9UJ41 708 aa12.17□□□□□ -0.46
CD46-211ENST00000464082 PPP1R3GB7ZBB8 358 aa12.16□□□□□ -0.46
CD46-211ENST00000464082 BCAMP50895 628 aa12.16□□□□□ -0.46
CD46-211ENST00000464082 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
CD46-211ENST00000464082 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
CD46-211ENST00000464082 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
CD46-211ENST00000464082 ITGBL1O95965 494 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms