RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
SSR3-202ENST00000463503 C3P01024 1663 aa18.93■□□□□ 0.62
SSR3-202ENST00000463503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
SSR3-202ENST00000463503 SOCS7O14512 581 aa18.93■□□□□ 0.62
SSR3-202ENST00000463503 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
SSR3-202ENST00000463503 CDK13Q14004 1512 aaKnown RBP18.92■□□□□ 0.62
SSR3-202ENST00000463503 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
SSR3-202ENST00000463503 KDM5CP41229 1560 aa18.9■□□□□ 0.62
SSR3-202ENST00000463503 ATP10AO60312 1499 aa18.9■□□□□ 0.62
SSR3-202ENST00000463503 PLCH2O75038 1416 aa18.87■□□□□ 0.61
SSR3-202ENST00000463503 MLECQ14165 292 aa18.87■□□□□ 0.61
SSR3-202ENST00000463503 KIF14Q15058 1648 aa18.87■□□□□ 0.61
SSR3-202ENST00000463503 SCAPERQ9BY12 1400 aa18.87■□□□□ 0.61
SSR3-202ENST00000463503 REREQ9P2R6 1566 aa18.87■□□□□ 0.61
SSR3-202ENST00000463503 DIP2CQ9Y2E4 1556 aa18.87■□□□□ 0.61
SSR3-202ENST00000463503 ABCA6Q8N139 1617 aa18.86■□□□□ 0.61
SSR3-202ENST00000463503 LTBP4Q8N2S1 1624 aa18.86■□□□□ 0.61
SSR3-202ENST00000463503 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
SSR3-202ENST00000463503 LRRIQ1Q96JM4 1722 aa18.84■□□□□ 0.61
SSR3-202ENST00000463503 UHRF1BP1Q6BDS2 1440 aa18.83■□□□□ 0.61
SSR3-202ENST00000463503 CDC42BPBQ9Y5S2 1711 aa18.81■□□□□ 0.6
SSR3-202ENST00000463503 ZNF518AQ6AHZ1 1483 aa18.81■□□□□ 0.6
SSR3-202ENST00000463503 PTPRTO14522 1441 aa18.81■□□□□ 0.6
SSR3-202ENST00000463503 IQSEC2Q5JU85 1478 aa18.8■□□□□ 0.6
SSR3-202ENST00000463503 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
SSR3-202ENST00000463503 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
SSR3-202ENST00000463503 ITSN2Q9NZM3 1697 aa18.77■□□□□ 0.6
SSR3-202ENST00000463503 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
SSR3-202ENST00000463503 MROH2AA6NES4 1674 aa18.75■□□□□ 0.59
SSR3-202ENST00000463503 AGLP35573 1532 aa18.74■□□□□ 0.59
SSR3-202ENST00000463503 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
SSR3-202ENST00000463503 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
SSR3-202ENST00000463503 KIDINS220Q9ULH0 1771 aa18.73■□□□□ 0.59
SSR3-202ENST00000463503 ARHGAP5Q13017 1502 aa18.73■□□□□ 0.59
SSR3-202ENST00000463503 NCOA1Q15788 1441 aa18.73■□□□□ 0.59
SSR3-202ENST00000463503 ABCC1P33527 1531 aa18.72■□□□□ 0.59
SSR3-202ENST00000463503 EEA1Q15075 1411 aa18.72■□□□□ 0.59
SSR3-202ENST00000463503 ZNF142P52746 1687 aaPredicted RBP18.72■□□□□ 0.59
SSR3-202ENST00000463503 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
SSR3-202ENST00000463503 MLH3Q9UHC1 1453 aa18.7■□□□□ 0.58
SSR3-202ENST00000463503 CAMSAP1Q5T5Y3 1602 aa18.68■□□□□ 0.58
SSR3-202ENST00000463503 CDC42BPAQ5VT25 1732 aa18.68■□□□□ 0.58
SSR3-202ENST00000463503 MYO3AQ8NEV4 1616 aa18.67■□□□□ 0.58
SSR3-202ENST00000463503 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
SSR3-202ENST00000463503 EFCAB2Q5VUJ9 269 aa18.66■□□□□ 0.58
SSR3-202ENST00000463503 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
SSR3-202ENST00000463503 AFAP1Q8N556 730 aa18.64■□□□□ 0.57
SSR3-202ENST00000463503 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
SSR3-202ENST00000463503 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
SSR3-202ENST00000463503 CLTCQ00610 1675 aaKnown RBP18.62■□□□□ 0.57
SSR3-202ENST00000463503 CNTLNQ9NXG0 1405 aa18.61■□□□□ 0.57
SSR3-202ENST00000463503 NPATQ14207 1427 aa18.59■□□□□ 0.57
SSR3-202ENST00000463503 PLXNC1O60486 1568 aa18.58■□□□□ 0.56
SSR3-202ENST00000463503 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
SSR3-202ENST00000463503 CEP170BQ9Y4F5 1589 aaPredicted RBP18.58■□□□□ 0.56
SSR3-202ENST00000463503 CLIP1P30622 1438 aa18.57■□□□□ 0.56
SSR3-202ENST00000463503 MED1Q15648 1581 aaPredicted RBP18.56■□□□□ 0.56
SSR3-202ENST00000463503 PLA2R1Q13018 1463 aa18.56■□□□□ 0.56
SSR3-202ENST00000463503 POLR1AO95602 1720 aaPredicted RBP18.55■□□□□ 0.56
SSR3-202ENST00000463503 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
SSR3-202ENST00000463503 INO80Q9ULG1 1556 aaPredicted RBP18.55■□□□□ 0.56
SSR3-202ENST00000463503 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
SSR3-202ENST00000463503 SYCP2Q9BX26 1530 aa18.51■□□□□ 0.55
SSR3-202ENST00000463503 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
SSR3-202ENST00000463503 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
SSR3-202ENST00000463503 MYT1LQ9UL68 1186 aa18.48■□□□□ 0.55
SSR3-202ENST00000463503 ATP7AQ04656 1500 aa18.48■□□□□ 0.55
SSR3-202ENST00000463503 NEURL4Q96JN8 1562 aa18.47■□□□□ 0.55
SSR3-202ENST00000463503 ESF1Q9H501 851 aaKnown RBP18.47■□□□□ 0.55
SSR3-202ENST00000463503 ADGBQ8N7X0 1667 aa18.47■□□□□ 0.55
SSR3-202ENST00000463503 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
SSR3-202ENST00000463503 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.55
SSR3-202ENST00000463503 DNMT1P26358 1616 aaKnown RBP18.46■□□□□ 0.55
SSR3-202ENST00000463503 ZMYM3Q14202 1370 aa18.46■□□□□ 0.55
SSR3-202ENST00000463503 UBAP1LF5GYI3 381 aa18.46■□□□□ 0.55
SSR3-202ENST00000463503 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
SSR3-202ENST00000463503 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
SSR3-202ENST00000463503 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
SSR3-202ENST00000463503 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
SSR3-202ENST00000463503 CPS1P31327 1500 aa18.39■□□□□ 0.54
SSR3-202ENST00000463503 PKD2Q13563 968 aa18.39■□□□□ 0.53
SSR3-202ENST00000463503 A2MP01023 1474 aa18.39■□□□□ 0.53
SSR3-202ENST00000463503 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
SSR3-202ENST00000463503 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
SSR3-202ENST00000463503 VWDEQ8N2E2 1590 aa18.37■□□□□ 0.53
SSR3-202ENST00000463503 STRCP1A6NGW2 1772 aa18.35■□□□□ 0.53
SSR3-202ENST00000463503 FYCO1Q9BQS8 1478 aa18.35■□□□□ 0.53
SSR3-202ENST00000463503 HSPA1LP34931 641 aa18.34■□□□□ 0.53
SSR3-202ENST00000463503 UBTFP17480 764 aaKnown RBP18.33■□□□□ 0.52
SSR3-202ENST00000463503 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
SSR3-202ENST00000463503 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
SSR3-202ENST00000463503 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
SSR3-202ENST00000463503 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
SSR3-202ENST00000463503 DEPDC5O75140 1603 aa18.31■□□□□ 0.52
SSR3-202ENST00000463503 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
SSR3-202ENST00000463503 PLEKHH2Q8IVE3 1493 aa18.31■□□□□ 0.52
SSR3-202ENST00000463503 IQGAP1P46940 1657 aa18.29■□□□□ 0.52
SSR3-202ENST00000463503 RNF17Q9BXT8 1623 aaKnown RBP18.28■□□□□ 0.52
SSR3-202ENST00000463503 SYNMO15061 1565 aa18.28■□□□□ 0.52
SSR3-202ENST00000463503 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms