RNA–Protein interactions for RNA: ENST00000461689.5

NEK4-203, Transcript of NIMA related kinase 4, humanhuman

TSL 5

Gene NEK4, Length 2,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-203ENST00000461689 KIF14Q15058 1648 aa19.5■□□□□ 0.71
NEK4-203ENST00000461689 DNMT1P26358 1616 aaKnown RBP19.49■□□□□ 0.71
NEK4-203ENST00000461689 TRIM52Q96A61 297 aa19.48■□□□□ 0.71
NEK4-203ENST00000461689 ZNF777Q9ULD5 760 aaPredicted RBP19.47■□□□□ 0.71
NEK4-203ENST00000461689 CAMSAP2Q08AD1 1489 aa19.47■□□□□ 0.71
NEK4-203ENST00000461689 ABCC10Q5T3U5 1492 aa19.44■□□□□ 0.7
NEK4-203ENST00000461689 PPP1R15AO75807 674 aaPredicted RBP19.44■□□□□ 0.7
NEK4-203ENST00000461689 KDM6BO15054 1643 aa19.41■□□□□ 0.7
NEK4-203ENST00000461689 MPHOSPH9Q99550 1183 aa19.41■□□□□ 0.7
NEK4-203ENST00000461689 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
NEK4-203ENST00000461689 TONSLQ96HA7 1378 aa19.4■□□□□ 0.7
NEK4-203ENST00000461689 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
NEK4-203ENST00000461689 CDC42BPAQ5VT25 1732 aa19.39■□□□□ 0.69
NEK4-203ENST00000461689 MIER1Q8N108 512 aa19.39■□□□□ 0.69
NEK4-203ENST00000461689 NCOA1Q15788 1441 aa19.38■□□□□ 0.69
NEK4-203ENST00000461689 ABCC2Q92887 1545 aa19.37■□□□□ 0.69
NEK4-203ENST00000461689 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
NEK4-203ENST00000461689 DENND4BO75064 1496 aaPredicted RBP19.34■□□□□ 0.69
NEK4-203ENST00000461689 ADGRL2O95490 1459 aa19.34■□□□□ 0.69
NEK4-203ENST00000461689 TSPY4P0CV99 314 aa19.33■□□□□ 0.68
NEK4-203ENST00000461689 TSPY10P0CW01 314 aa19.33■□□□□ 0.68
NEK4-203ENST00000461689 ADGBQ8N7X0 1667 aa19.32■□□□□ 0.68
NEK4-203ENST00000461689 CROCC2H7BZ55 1655 aa19.3■□□□□ 0.68
NEK4-203ENST00000461689 RSPH4AQ5TD94 716 aa19.3■□□□□ 0.68
NEK4-203ENST00000461689 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
NEK4-203ENST00000461689 UHRF1BP1LA0JNW5 1464 aa19.29■□□□□ 0.68
NEK4-203ENST00000461689 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.68
NEK4-203ENST00000461689 SHANK2Q9UPX8 1470 aa19.29■□□□□ 0.68
NEK4-203ENST00000461689 C9orf84Q5VXU9 1444 aa19.27■□□□□ 0.67
NEK4-203ENST00000461689 FOXD1Q16676 465 aa19.26■□□□□ 0.67
NEK4-203ENST00000461689 KCNH8Q96L42 1107 aa19.26■□□□□ 0.67
NEK4-203ENST00000461689 PREX2Q70Z35 1606 aa19.25■□□□□ 0.67
NEK4-203ENST00000461689 CENPBP07199 599 aaPredicted RBP19.25■□□□□ 0.67
NEK4-203ENST00000461689 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
NEK4-203ENST00000461689 CDC42BPBQ9Y5S2 1711 aa19.25■□□□□ 0.67
NEK4-203ENST00000461689 ANKRD30BQ9BXX2 1392 aa19.25■□□□□ 0.67
NEK4-203ENST00000461689 MBD5Q9P267 1494 aa19.25■□□□□ 0.67
NEK4-203ENST00000461689 ARHGEF5Q12774 1597 aa19.25■□□□□ 0.67
NEK4-203ENST00000461689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.24■□□□□ 0.67
NEK4-203ENST00000461689 KDM5BQ9UGL1 1544 aa19.24■□□□□ 0.67
NEK4-203ENST00000461689 SAMD9LQ8IVG5 1584 aa19.21■□□□□ 0.67
NEK4-203ENST00000461689 TTC37Q6PGP7 1564 aa19.2■□□□□ 0.66
NEK4-203ENST00000461689 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
NEK4-203ENST00000461689 ZCCHC11Q5TAX3 1644 aaKnown RBP19.2■□□□□ 0.66
NEK4-203ENST00000461689 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
NEK4-203ENST00000461689 PZPP20742 1482 aa19.2■□□□□ 0.66
NEK4-203ENST00000461689 KIF15Q9NS87 1388 aa19.18■□□□□ 0.66
NEK4-203ENST00000461689 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
NEK4-203ENST00000461689 L3MBTL2Q969R5 705 aa19.17■□□□□ 0.66
NEK4-203ENST00000461689 RPRD2Q5VT52 1461 aaKnown RBP19.17■□□□□ 0.66
NEK4-203ENST00000461689 KIAA1107Q9UPP5 1409 aa19.17■□□□□ 0.66
NEK4-203ENST00000461689 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
NEK4-203ENST00000461689 MYO5CQ9NQX4 1742 aa19.16■□□□□ 0.66
NEK4-203ENST00000461689 PLCH2O75038 1416 aa19.15■□□□□ 0.66
NEK4-203ENST00000461689 NUP155O75694 1391 aa19.15■□□□□ 0.66
NEK4-203ENST00000461689 PKD2Q13563 968 aa19.14■□□□□ 0.66
NEK4-203ENST00000461689 EFCAB2Q5VUJ9 269 aa19.14■□□□□ 0.66
NEK4-203ENST00000461689 HIRIP3Q9BW71 556 aaPredicted RBP19.14■□□□□ 0.66
NEK4-203ENST00000461689 SYCP2Q9BX26 1530 aa19.13■□□□□ 0.65
NEK4-203ENST00000461689 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
NEK4-203ENST00000461689 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
NEK4-203ENST00000461689 MAST1Q9Y2H9 1570 aa19.09■□□□□ 0.65
NEK4-203ENST00000461689 KDM5DQ9BY66 1539 aa19.08■□□□□ 0.64
NEK4-203ENST00000461689 TEX14Q8IWB6 1497 aa19.06■□□□□ 0.64
NEK4-203ENST00000461689 WDR7Q9Y4E6 1490 aa19.05■□□□□ 0.64
NEK4-203ENST00000461689 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
NEK4-203ENST00000461689 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
NEK4-203ENST00000461689 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
NEK4-203ENST00000461689 ARAP3Q8WWN8 1544 aa19.03■□□□□ 0.64
NEK4-203ENST00000461689 HSPA5P11021 654 aaKnown RBP19.03■□□□□ 0.64
NEK4-203ENST00000461689 NBPF8Q3BBV2 869 aa19.02■□□□□ 0.64
NEK4-203ENST00000461689 PLXNC1O60486 1568 aa19.01■□□□□ 0.63
NEK4-203ENST00000461689 NPM1P06748 294 aaKnown RBP eCLIP19■□□□□ 0.63
NEK4-203ENST00000461689 ABCC1P33527 1531 aa19■□□□□ 0.63
NEK4-203ENST00000461689 TRAPPC8Q9Y2L5 1435 aa18.98■□□□□ 0.63
NEK4-203ENST00000461689 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
NEK4-203ENST00000461689 FAM135AQ9P2D6 1515 aa18.98■□□□□ 0.63
NEK4-203ENST00000461689 ASXL2Q76L83 1435 aa18.97■□□□□ 0.63
NEK4-203ENST00000461689 SPAG9O60271 1321 aaKnown RBP18.96■□□□□ 0.63
NEK4-203ENST00000461689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.95■□□□□ 0.622e-6■■□□□ 11.6
NEK4-203ENST00000461689 ERBINQ96RT1 1412 aa18.94■□□□□ 0.62
NEK4-203ENST00000461689 ABCA9Q8IUA7 1624 aa18.94■□□□□ 0.62
NEK4-203ENST00000461689 ANP32CO43423 234 aa18.94■□□□□ 0.62
NEK4-203ENST00000461689 AFAP1Q8N556 730 aa18.94■□□□□ 0.62
NEK4-203ENST00000461689 RTEL1-TNFRSF6BF6WH68 1400 aa18.94■□□□□ 0.62
NEK4-203ENST00000461689 UNC13BO14795 1591 aa18.93■□□□□ 0.62
NEK4-203ENST00000461689 FANCAO15360 1455 aa18.93■□□□□ 0.62
NEK4-203ENST00000461689 WASHC2AQ641Q2 1341 aa18.91■□□□□ 0.62
NEK4-203ENST00000461689 GTF3C3Q9Y5Q9 886 aa18.89■□□□□ 0.61
NEK4-203ENST00000461689 ZNF326Q5BKZ1 582 aaKnown RBP18.89■□□□□ 0.61
NEK4-203ENST00000461689 CCER2I3L3R5 266 aa18.88■□□□□ 0.61
NEK4-203ENST00000461689 SPATA31E1Q6ZUB1 1445 aa18.88■□□□□ 0.61
NEK4-203ENST00000461689 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
NEK4-203ENST00000461689 IQGAP3Q86VI3 1631 aa18.87■□□□□ 0.61
NEK4-203ENST00000461689 CCDC144AA2RUR9 1427 aa18.86■□□□□ 0.61
NEK4-203ENST00000461689 MAGI2Q86UL8 1455 aa18.86■□□□□ 0.61
NEK4-203ENST00000461689 SCAPERQ9BY12 1400 aa18.86■□□□□ 0.61
NEK4-203ENST00000461689 ADGRL1O94910 1474 aa18.85■□□□□ 0.61
NEK4-203ENST00000461689 DCAF11Q8TEB1 546 aa18.85■□□□□ 0.61
NEK4-203ENST00000461689 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms