RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 ATP10BO94823 1461 aa10□□□□□ -0.81
MSH2-204ENST00000461394 DHX57Q6P158 1386 aaKnown RBP10□□□□□ -0.81
MSH2-204ENST00000461394 ABCC2Q92887 1545 aa9.99□□□□□ -0.81
MSH2-204ENST00000461394 ZNF777Q9ULD5 760 aaPredicted RBP9.99□□□□□ -0.81
MSH2-204ENST00000461394 CDC42BPAQ5VT25 1732 aa9.99□□□□□ -0.81
MSH2-204ENST00000461394 FKBP8Q14318 412 aa9.98□□□□□ -0.81
MSH2-204ENST00000461394 CHIC2Q9UKJ5 165 aa9.98□□□□□ -0.81
MSH2-204ENST00000461394 GCC2Q8IWJ2 1684 aa9.98□□□□□ -0.81
MSH2-204ENST00000461394 ZCCHC11Q5TAX3 1644 aaKnown RBP9.97□□□□□ -0.81
MSH2-204ENST00000461394 CFDP1Q9UEE9 299 aaPredicted RBP9.97□□□□□ -0.81
MSH2-204ENST00000461394 DNMT1P26358 1616 aaKnown RBP9.96□□□□□ -0.81
MSH2-204ENST00000461394 OSCARQ8IYS5 282 aa9.96□□□□□ -0.82
MSH2-204ENST00000461394 RNF216Q9NWF9 866 aaPredicted RBP9.96□□□□□ -0.82
MSH2-204ENST00000461394 CAMSAP2Q08AD1 1489 aa9.96□□□□□ -0.82
MSH2-204ENST00000461394 ADGBQ8N7X0 1667 aa9.96□□□□□ -0.82
MSH2-204ENST00000461394 RRP7BPQ9NSQ0 103 aa9.95□□□□□ -0.82
MSH2-204ENST00000461394 CLSPNQ9HAW4 1339 aa9.95□□□□□ -0.82
MSH2-204ENST00000461394 GPATCH8Q9UKJ3 1502 aaKnown RBP9.94□□□□□ -0.82
MSH2-204ENST00000461394 DAPK1P53355 1430 aa9.94□□□□□ -0.82
MSH2-204ENST00000461394 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
MSH2-204ENST00000461394 MYO5CQ9NQX4 1742 aa9.93□□□□□ -0.82
MSH2-204ENST00000461394 CROCC2H7BZ55 1655 aa9.93□□□□□ -0.82
MSH2-204ENST00000461394 HFM1A2PYH4 1435 aa9.93□□□□□ -0.82
MSH2-204ENST00000461394 PREX2Q70Z35 1606 aa9.93□□□□□ -0.82
MSH2-204ENST00000461394 UHRF1BP1LA0JNW5 1464 aa9.92□□□□□ -0.82
MSH2-204ENST00000461394 ZNF644Q9H582 1327 aaPredicted RBP9.92□□□□□ -0.82
MSH2-204ENST00000461394 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
MSH2-204ENST00000461394 KCNH8Q96L42 1107 aa9.92□□□□□ -0.82
MSH2-204ENST00000461394 ABCC10Q5T3U5 1492 aa9.91□□□□□ -0.82
MSH2-204ENST00000461394 NAIPQ13075 1403 aa9.91□□□□□ -0.82
MSH2-204ENST00000461394 CDC42BPBQ9Y5S2 1711 aa9.91□□□□□ -0.82
MSH2-204ENST00000461394 ATXN8OSP0DMR3 200 aa9.91□□□□□ -0.82
MSH2-204ENST00000461394 TTC37Q6PGP7 1564 aa9.9□□□□□ -0.82
MSH2-204ENST00000461394 ARHGAP5Q13017 1502 aa9.9□□□□□ -0.82
MSH2-204ENST00000461394 ABCC5O15440 1437 aa9.9□□□□□ -0.83
MSH2-204ENST00000461394 AKNAQ7Z591 1439 aa9.9□□□□□ -0.83
MSH2-204ENST00000461394 MAPKBP1O60336 1514 aa9.88□□□□□ -0.83
MSH2-204ENST00000461394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.88□□□□□ -0.83
MSH2-204ENST00000461394 KDM5BQ9UGL1 1544 aa9.88□□□□□ -0.83
MSH2-204ENST00000461394 NEUROD1Q13562 356 aa9.88□□□□□ -0.83
MSH2-204ENST00000461394 KDM6BO15054 1643 aa9.87□□□□□ -0.83
MSH2-204ENST00000461394 NPM1P06748 294 aaKnown RBP eCLIP9.87□□□□□ -0.83
MSH2-204ENST00000461394 SAMD9LQ8IVG5 1584 aa9.87□□□□□ -0.83
MSH2-204ENST00000461394 ROCK1Q13464 1354 aa9.87□□□□□ -0.83
MSH2-204ENST00000461394 ANKRD30AQ9BXX3 1397 aa9.86□□□□□ -0.83
MSH2-204ENST00000461394 TSPY4P0CV99 314 aa9.85□□□□□ -0.83
MSH2-204ENST00000461394 TSPY10P0CW01 314 aa9.85□□□□□ -0.83
MSH2-204ENST00000461394 ARHGEF5Q12774 1597 aa9.84□□□□□ -0.83
MSH2-204ENST00000461394 ZNF316A6NFI3 1004 aaPredicted RBP9.84□□□□□ -0.83
MSH2-204ENST00000461394 HNRNPMP52272 730 aaKnown RBP eCLIP9.84□□□□□ -0.83
MSH2-204ENST00000461394 ACIN1Q9UKV3 1341 aaKnown RBP9.83□□□□□ -0.84
MSH2-204ENST00000461394 C9orf84Q5VXU9 1444 aa9.83□□□□□ -0.84
MSH2-204ENST00000461394 SYCP2Q9BX26 1530 aa9.83□□□□□ -0.84
MSH2-204ENST00000461394 SIN3AQ96ST3 1273 aa9.83□□□□□ -0.84
MSH2-204ENST00000461394 CCDC141Q6ZP82 1450 aa9.83□□□□□ -0.84
MSH2-204ENST00000461394 PLEKHH2Q8IVE3 1493 aa9.83□□□□□ -0.84
MSH2-204ENST00000461394 SHANK2Q9UPX8 1470 aa9.83□□□□□ -0.84
MSH2-204ENST00000461394 WDR7Q9Y4E6 1490 aa9.83□□□□□ -0.84
MSH2-204ENST00000461394 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
MSH2-204ENST00000461394 ADGRL2O95490 1459 aa9.82□□□□□ -0.84
MSH2-204ENST00000461394 TONSLQ96HA7 1378 aa9.81□□□□□ -0.84
MSH2-204ENST00000461394 MSH5O43196 834 aa9.81□□□□□ -0.84
MSH2-204ENST00000461394 EFCAB2Q5VUJ9 269 aa9.81□□□□□ -0.84
MSH2-204ENST00000461394 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
MSH2-204ENST00000461394 NCOA1Q15788 1441 aa9.8□□□□□ -0.84
MSH2-204ENST00000461394 ASXL2Q76L83 1435 aa9.8□□□□□ -0.84
MSH2-204ENST00000461394 MYCNP04198 464 aaPredicted RBP9.79□□□□□ -0.84
MSH2-204ENST00000461394 PLCH2O75038 1416 aa9.79□□□□□ -0.84
MSH2-204ENST00000461394 ABCA9Q8IUA7 1624 aa9.78□□□□□ -0.84
MSH2-204ENST00000461394 MPHOSPH9Q99550 1183 aa9.78□□□□□ -0.84
MSH2-204ENST00000461394 ANKRD50Q9ULJ7 1429 aa9.78□□□□□ -0.84
MSH2-204ENST00000461394 ABCC1P33527 1531 aa9.77□□□□□ -0.84
MSH2-204ENST00000461394 KIF15Q9NS87 1388 aa9.77□□□□□ -0.84
MSH2-204ENST00000461394 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.85
MSH2-204ENST00000461394 DIEXFQ68CQ4 756 aaKnown RBP9.77□□□□□ -0.85
MSH2-204ENST00000461394 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.85
MSH2-204ENST00000461394 RIMBP3CA6NJZ7 1639 aa9.77□□□□□ -0.85
MSH2-204ENST00000461394 RIMBP3BA6NNM3 1639 aa9.77□□□□□ -0.85
MSH2-204ENST00000461394 RIMBP3Q9UFD9 1639 aa9.77□□□□□ -0.85
MSH2-204ENST00000461394 MBD5Q9P267 1494 aa9.77□□□□□ -0.85
MSH2-204ENST00000461394 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
MSH2-204ENST00000461394 ARAP3Q8WWN8 1544 aa9.76□□□□□ -0.85
MSH2-204ENST00000461394 KIAA1107Q9UPP5 1409 aa9.75□□□□□ -0.85
MSH2-204ENST00000461394 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
MSH2-204ENST00000461394 PLXNC1O60486 1568 aa9.75□□□□□ -0.85
MSH2-204ENST00000461394 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
MSH2-204ENST00000461394 FANCAO15360 1455 aa9.74□□□□□ -0.85
MSH2-204ENST00000461394 CYB5RLQ6IPT4 315 aa9.73□□□□□ -0.85
MSH2-204ENST00000461394 NUP155O75694 1391 aa9.73□□□□□ -0.85
MSH2-204ENST00000461394 PZPP20742 1482 aa9.72□□□□□ -0.85
MSH2-204ENST00000461394 ARHGEF12Q9NZN5 1544 aa9.72□□□□□ -0.85
MSH2-204ENST00000461394 SPAG9O60271 1321 aaKnown RBP9.72□□□□□ -0.85
MSH2-204ENST00000461394 ADGRL1O94910 1474 aa9.72□□□□□ -0.85
MSH2-204ENST00000461394 DUOX2Q9NRD8 1548 aa9.72□□□□□ -0.85
MSH2-204ENST00000461394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.71□□□□□ -0.86
MSH2-204ENST00000461394 TRAPPC8Q9Y2L5 1435 aa9.71□□□□□ -0.86
MSH2-204ENST00000461394 PPP1R15AO75807 674 aaPredicted RBP9.7□□□□□ -0.86
MSH2-204ENST00000461394 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
MSH2-204ENST00000461394 PKD2Q13563 968 aa9.7□□□□□ -0.86
MSH2-204ENST00000461394 CD109Q6YHK3 1445 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms