RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 PLEKHD1A6NEE1 506 aa29.3■■■□□ 2.28
CCM2-203ENST00000461377 KDM6BO15054 1643 aa29.3■■■□□ 2.28
CCM2-203ENST00000461377 ABCC10Q5T3U5 1492 aa29.28■■■□□ 2.28
CCM2-203ENST00000461377 CFDP1Q9UEE9 299 aaPredicted RBP29.28■■■□□ 2.28
CCM2-203ENST00000461377 CLASP1Q7Z460 1538 aa29.22■■■□□ 2.27
CCM2-203ENST00000461377 ACIN1Q9UKV3 1341 aaKnown RBP29.2■■■□□ 2.27
CCM2-203ENST00000461377 ERCC6L2Q5T890 1561 aa29.2■■■□□ 2.26
CCM2-203ENST00000461377 CDC42BPAQ5VT25 1732 aa29.2■■■□□ 2.26
CCM2-203ENST00000461377 DENND4BO75064 1496 aaPredicted RBP29.2■■■□□ 2.26
CCM2-203ENST00000461377 PPP1R15AO75807 674 aaPredicted RBP29.17■■■□□ 2.26
CCM2-203ENST00000461377 CROCC2H7BZ55 1655 aa29.16■■■□□ 2.26
CCM2-203ENST00000461377 MIER1Q8N108 512 aa29.15■■■□□ 2.26
CCM2-203ENST00000461377 ADGRL2O95490 1459 aa29.15■■■□□ 2.26
CCM2-203ENST00000461377 ADGBQ8N7X0 1667 aa29.15■■■□□ 2.26
CCM2-203ENST00000461377 TRIM52Q96A61 297 aa29.14■■■□□ 2.26
CCM2-203ENST00000461377 TONSLQ96HA7 1378 aa29.14■■■□□ 2.26
CCM2-203ENST00000461377 ABCC2Q92887 1545 aa29.12■■■□□ 2.25
CCM2-203ENST00000461377 ZNF777Q9ULD5 760 aaPredicted RBP29.12■■■□□ 2.25
CCM2-203ENST00000461377 NCOA1Q15788 1441 aa29.1■■■□□ 2.25
CCM2-203ENST00000461377 MPHOSPH9Q99550 1183 aa29.09■■■□□ 2.25
CCM2-203ENST00000461377 SHANK2Q9UPX8 1470 aa29.06■■■□□ 2.24
CCM2-203ENST00000461377 KDM5BQ9UGL1 1544 aa29.03■■■□□ 2.24
CCM2-203ENST00000461377 ANKRD30AQ9BXX3 1397 aa29.02■■■□□ 2.24
CCM2-203ENST00000461377 PREX2Q70Z35 1606 aa29.02■■■□□ 2.24
CCM2-203ENST00000461377 UHRF1BP1LA0JNW5 1464 aa29■■■□□ 2.23
CCM2-203ENST00000461377 ARHGEF5Q12774 1597 aa28.99■■■□□ 2.23
CCM2-203ENST00000461377 CDC42BPBQ9Y5S2 1711 aa28.97■■■□□ 2.23
CCM2-203ENST00000461377 C9orf84Q5VXU9 1444 aa28.97■■■□□ 2.23
CCM2-203ENST00000461377 SAMD9LQ8IVG5 1584 aa28.95■■■□□ 2.23
CCM2-203ENST00000461377 MBD5Q9P267 1494 aa28.95■■■□□ 2.23
CCM2-203ENST00000461377 TTC37Q6PGP7 1564 aa28.94■■■□□ 2.22
CCM2-203ENST00000461377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.94■■■□□ 2.224e-7■■■□□ 18.4
CCM2-203ENST00000461377 PZPP20742 1482 aa28.94■■■□□ 2.22
CCM2-203ENST00000461377 ANKRD30BQ9BXX2 1392 aa28.94■■■□□ 2.22
CCM2-203ENST00000461377 CENPBP07199 599 aaPredicted RBP28.93■■■□□ 2.22
CCM2-203ENST00000461377 ANKRD50Q9ULJ7 1429 aa28.9■■■□□ 2.22
CCM2-203ENST00000461377 ZCCHC11Q5TAX3 1644 aaKnown RBP28.9■■■□□ 2.22
CCM2-203ENST00000461377 FOXD1Q16676 465 aa28.89■■■□□ 2.22
CCM2-203ENST00000461377 SLC4A1APQ9BWU0 796 aaKnown RBP28.89■■■□□ 2.22
CCM2-203ENST00000461377 CCDC141Q6ZP82 1450 aa28.88■■■□□ 2.21
CCM2-203ENST00000461377 TSPY4P0CV99 314 aa28.87■■■□□ 2.21
CCM2-203ENST00000461377 TSPY10P0CW01 314 aa28.87■■■□□ 2.21
CCM2-203ENST00000461377 HNRNPMP52272 730 aaKnown RBP eCLIP28.87■■■□□ 2.212e-6■■■□□ 15.7
CCM2-203ENST00000461377 RPRD2Q5VT52 1461 aaKnown RBP28.86■■■□□ 2.21
CCM2-203ENST00000461377 ARHGAP5Q13017 1502 aa28.84■■■□□ 2.21
CCM2-203ENST00000461377 RSPH4AQ5TD94 716 aa28.84■■■□□ 2.21
CCM2-203ENST00000461377 MYO5CQ9NQX4 1742 aa28.83■■■□□ 2.21
CCM2-203ENST00000461377 KIF15Q9NS87 1388 aa28.8■■■□□ 2.2
CCM2-203ENST00000461377 SYCP2Q9BX26 1530 aa28.8■■■□□ 2.2
CCM2-203ENST00000461377 MAST1Q9Y2H9 1570 aa28.79■■■□□ 2.2
CCM2-203ENST00000461377 KDM5DQ9BY66 1539 aa28.78■■■□□ 2.2
CCM2-203ENST00000461377 PLEKHH2Q8IVE3 1493 aa28.78■■■□□ 2.2
CCM2-203ENST00000461377 KIAA1107Q9UPP5 1409 aa28.78■■■□□ 2.2
CCM2-203ENST00000461377 TEX14Q8IWB6 1497 aa28.77■■■□□ 2.2
CCM2-203ENST00000461377 L3MBTL2Q969R5 705 aa28.77■■■□□ 2.2
CCM2-203ENST00000461377 SCAF1Q9H7N4 1312 aaKnown RBP28.76■■■□□ 2.19
CCM2-203ENST00000461377 YTHDC1Q96MU7 727 aaKnown RBP28.75■■■□□ 2.19
CCM2-203ENST00000461377 PLCH2O75038 1416 aa28.75■■■□□ 2.19
CCM2-203ENST00000461377 KCNH8Q96L42 1107 aa28.74■■■□□ 2.19
CCM2-203ENST00000461377 HIRIP3Q9BW71 556 aaPredicted RBP28.73■■■□□ 2.19
CCM2-203ENST00000461377 NUP155O75694 1391 aa28.7■■■□□ 2.18
CCM2-203ENST00000461377 DDX10Q13206 875 aaKnown RBP28.7■■■□□ 2.18
CCM2-203ENST00000461377 PKD2Q13563 968 aa28.69■■■□□ 2.18
CCM2-203ENST00000461377 ARHGEF12Q9NZN5 1544 aa28.66■■■□□ 2.18
CCM2-203ENST00000461377 PLXNC1O60486 1568 aa28.65■■■□□ 2.18
CCM2-203ENST00000461377 ARAP3Q8WWN8 1544 aa28.63■■■□□ 2.17
CCM2-203ENST00000461377 EFCAB2Q5VUJ9 269 aa28.63■■■□□ 2.17
CCM2-203ENST00000461377 ABCC1P33527 1531 aa28.62■■■□□ 2.17
CCM2-203ENST00000461377 WDR7Q9Y4E6 1490 aa28.62■■■□□ 2.17
CCM2-203ENST00000461377 HSPA5P11021 654 aaKnown RBP28.58■■■□□ 2.17
CCM2-203ENST00000461377 NBPF8Q3BBV2 869 aa28.58■■■□□ 2.17
CCM2-203ENST00000461377 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
CCM2-203ENST00000461377 UNC13BO14795 1591 aa28.57■■■□□ 2.16
CCM2-203ENST00000461377 FAM135AQ9P2D6 1515 aa28.56■■■□□ 2.16
CCM2-203ENST00000461377 EIF4G2P78344 907 aaKnown RBP eCLIP28.55■■■□□ 2.16
CCM2-203ENST00000461377 DUOX2Q9NRD8 1548 aa28.54■■■□□ 2.16
CCM2-203ENST00000461377 TRAPPC8Q9Y2L5 1435 aa28.51■■■□□ 2.15
CCM2-203ENST00000461377 ABCA9Q8IUA7 1624 aa28.5■■■□□ 2.15
CCM2-203ENST00000461377 ERBINQ96RT1 1412 aa28.49■■■□□ 2.15
CCM2-203ENST00000461377 ASXL2Q76L83 1435 aa28.46■■■□□ 2.15
CCM2-203ENST00000461377 MAGI2Q86UL8 1455 aa28.45■■■□□ 2.15
CCM2-203ENST00000461377 IQGAP3Q86VI3 1631 aa28.45■■■□□ 2.15
CCM2-203ENST00000461377 GTF3C3Q9Y5Q9 886 aa28.44■■■□□ 2.14
CCM2-203ENST00000461377 WASHC2AQ641Q2 1341 aa28.44■■■□□ 2.14
CCM2-203ENST00000461377 RTEL1-TNFRSF6BF6WH68 1400 aa28.44■■■□□ 2.14
CCM2-203ENST00000461377 SPATA31E1Q6ZUB1 1445 aa28.44■■■□□ 2.14
CCM2-203ENST00000461377 UHRF1BP1Q6BDS2 1440 aa28.42■■■□□ 2.14
CCM2-203ENST00000461377 ANP32CO43423 234 aa28.41■■■□□ 2.14
CCM2-203ENST00000461377 FANCAO15360 1455 aa28.41■■■□□ 2.14
CCM2-203ENST00000461377 ZFYVE16Q7Z3T8 1539 aa28.4■■■□□ 2.14
CCM2-203ENST00000461377 SPAG9O60271 1321 aaKnown RBP28.38■■■□□ 2.13
CCM2-203ENST00000461377 CCER2I3L3R5 266 aa28.37■■■□□ 2.13
CCM2-203ENST00000461377 AFAP1Q8N556 730 aa28.34■■■□□ 2.13
CCM2-203ENST00000461377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.34■■■□□ 2.13
CCM2-203ENST00000461377 CCDC7Q96M83 1385 aa28.33■■■□□ 2.13
CCM2-203ENST00000461377 PLA2R1Q13018 1463 aa28.33■■■□□ 2.13
CCM2-203ENST00000461377 RALGAPBQ86X10 1494 aa28.33■■■□□ 2.13
CCM2-203ENST00000461377 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.12
CCM2-203ENST00000461377 CCDC144AA2RUR9 1427 aa28.31■■■□□ 2.12
CCM2-203ENST00000461377 C11orf95C9JLR9 678 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms