RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 MS4A4AQ96JQ5 239 aa8.62□□□□□ -1.03
VPS8-215ENST00000460158 PHF8Q9UPP1 1060 aa8.61□□□□□ -1.03
VPS8-215ENST00000460158 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
VPS8-215ENST00000460158 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
VPS8-215ENST00000460158 ZSWIM6Q9HCJ5 1215 aa8.59□□□□□ -1.03
VPS8-215ENST00000460158 NLRP6P59044 892 aa8.58□□□□□ -1.04
VPS8-215ENST00000460158 TMEM92Q6UXU6 159 aa8.58□□□□□ -1.04
VPS8-215ENST00000460158 BCL11BQ9C0K0 894 aaPredicted RBP8.57□□□□□ -1.04
VPS8-215ENST00000460158 ERBB3P21860 1342 aa8.55□□□□□ -1.04
VPS8-215ENST00000460158 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
VPS8-215ENST00000460158 FBXO22Q8NEZ5 403 aa8.55□□□□□ -1.04
VPS8-215ENST00000460158 SLC24A1O60721 1099 aa8.54□□□□□ -1.04
VPS8-215ENST00000460158 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
VPS8-215ENST00000460158 STK25O00506 426 aa8.52□□□□□ -1.05
VPS8-215ENST00000460158 GPR153Q6NV75 609 aa8.51□□□□□ -1.05
VPS8-215ENST00000460158 BBXQ8WY36 941 aaPredicted RBP8.51□□□□□ -1.05
VPS8-215ENST00000460158 MFRPQ9BY79 579 aa8.51□□□□□ -1.05
VPS8-215ENST00000460158 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
VPS8-215ENST00000460158 VARS2Q5ST30 1063 aaKnown RBP8.49□□□□□ -1.05
VPS8-215ENST00000460158 HS6ST3Q8IZP7 471 aa8.49□□□□□ -1.05
VPS8-215ENST00000460158 ZNF687Q8N1G0 1237 aa8.47□□□□□ -1.05
VPS8-215ENST00000460158 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.46□□□□□ -1.06
VPS8-215ENST00000460158 KIF3CO14782 793 aa8.44□□□□□ -1.06
VPS8-215ENST00000460158 ARSIQ5FYB1 569 aa8.44□□□□□ -1.06
VPS8-215ENST00000460158 PAXIP1Q6ZW49 1069 aaPredicted RBP8.43□□□□□ -1.06
VPS8-215ENST00000460158 CFAP44Q96MT7 982 aa8.42□□□□□ -1.06
VPS8-215ENST00000460158 C2orf72A6NCS6 295 aa8.41□□□□□ -1.06
VPS8-215ENST00000460158 NKX1-1Q15270 411 aaPredicted RBP8.41□□□□□ -1.06
VPS8-215ENST00000460158 DNAJC5Q9H3Z4 198 aa8.41□□□□□ -1.06
VPS8-215ENST00000460158 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
VPS8-215ENST00000460158 SLC34A2O95436 690 aa8.39□□□□□ -1.07
VPS8-215ENST00000460158 SPRYD3Q8NCJ5 442 aa8.39□□□□□ -1.07
VPS8-215ENST00000460158 PTGER2P43116 358 aa8.38□□□□□ -1.07
VPS8-215ENST00000460158 HAP1P54257 671 aaPredicted RBP8.38□□□□□ -1.07
VPS8-215ENST00000460158 TMC2Q8TDI7 906 aa8.37□□□□□ -1.07
VPS8-215ENST00000460158 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
VPS8-215ENST00000460158 KHSRPQ92945 711 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS8-215ENST00000460158 MYT1LQ9UL68 1186 aa8.35□□□□□ -1.07
VPS8-215ENST00000460158 GTPBP6O43824 516 aaPredicted RBP8.33□□□□□ -1.08
VPS8-215ENST00000460158 PPP1R37O75864 691 aa8.33□□□□□ -1.08
VPS8-215ENST00000460158 NUDT7P0C024 238 aa8.33□□□□□ -1.08
VPS8-215ENST00000460158 PBX2P40425 430 aa8.33□□□□□ -1.08
VPS8-215ENST00000460158 PCDHGA4Q9Y5G9 962 aa8.33□□□□□ -1.08
VPS8-215ENST00000460158 ANKRD13DQ6ZTN6 518 aa8.31□□□□□ -1.08
VPS8-215ENST00000460158 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS8-215ENST00000460158 LHX6Q9UPM6 363 aa8.29□□□□□ -1.08
VPS8-215ENST00000460158 PSDA5PKW4 1024 aaPredicted RBP8.28□□□□□ -1.08
VPS8-215ENST00000460158 TSHZ2Q9NRE2 1034 aa8.28□□□□□ -1.08
VPS8-215ENST00000460158 FOXK1P85037 733 aa8.27□□□□□ -1.09
VPS8-215ENST00000460158 PTCD2Q8WV60 388 aaKnown RBP8.27□□□□□ -1.09
VPS8-215ENST00000460158 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
VPS8-215ENST00000460158 KDM4FA0A1W2PPD8 638 aa8.25□□□□□ -1.09
VPS8-215ENST00000460158 RYDENQ9NUL5 291 aaKnown RBP8.25□□□□□ -1.09
VPS8-215ENST00000460158 POTEEQ6S8J3 1075 aa8.24□□□□□ -1.09
VPS8-215ENST00000460158 PLPP6Q8IY26 295 aa8.23□□□□□ -1.09
VPS8-215ENST00000460158 VSIG10Q8N0Z9 540 aa8.23□□□□□ -1.09
VPS8-215ENST00000460158 ARHGAP33O14559 1287 aa8.22□□□□□ -1.09
VPS8-215ENST00000460158 KDM2AQ9Y2K7 1162 aa8.22□□□□□ -1.09
VPS8-215ENST00000460158 TBC1D12O60347 775 aa8.21□□□□□ -1.1
VPS8-215ENST00000460158 AXIN2Q9Y2T1 843 aa8.21□□□□□ -1.1
VPS8-215ENST00000460158 DSG2Q14126 1118 aa8.2□□□□□ -1.1
VPS8-215ENST00000460158 TK2O00142 265 aa8.17□□□□□ -1.1
VPS8-215ENST00000460158 ADGRD1Q6QNK2 874 aa8.17□□□□□ -1.1
VPS8-215ENST00000460158 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
VPS8-215ENST00000460158 OXER1Q8TDS5 423 aa8.14□□□□□ -1.11
VPS8-215ENST00000460158 CRISPLD2Q9H0B8 497 aa8.14□□□□□ -1.11
VPS8-215ENST00000460158 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
VPS8-215ENST00000460158 HRO43593 1189 aa8.12□□□□□ -1.11
VPS8-215ENST00000460158 CADPS2Q86UW7 1296 aa8.12□□□□□ -1.11
VPS8-215ENST00000460158 PSEN2P49810 448 aa8.11□□□□□ -1.11
VPS8-215ENST00000460158 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
VPS8-215ENST00000460158 KCNH8Q96L42 1107 aa8.11□□□□□ -1.11
VPS8-215ENST00000460158 PDE4AP27815 886 aa8.1□□□□□ -1.11
VPS8-215ENST00000460158 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
VPS8-215ENST00000460158 UPF1Q92900 1129 aaKnown RBP eCLIP8.07□□□□□ -1.12
VPS8-215ENST00000460158 NCKAP5LQ9HCH0 1330 aa8.06□□□□□ -1.12
VPS8-215ENST00000460158 STAC3Q96MF2 364 aa8.06□□□□□ -1.12
VPS8-215ENST00000460158 KCNK17Q96T54 332 aa8.06□□□□□ -1.12
VPS8-215ENST00000460158 PLA2G2EQ9NZK7 142 aa8.06□□□□□ -1.12
VPS8-215ENST00000460158 ZNF454Q8N9F8 522 aa8.05□□□□□ -1.12
VPS8-215ENST00000460158 SLC4A5Q9BY07 1137 aa8.05□□□□□ -1.12
VPS8-215ENST00000460158 BCL2L12Q9HB09 334 aa8.05□□□□□ -1.12
VPS8-215ENST00000460158 ANO8Q9HCE9 1232 aaPredicted RBP8.05□□□□□ -1.12
VPS8-215ENST00000460158 FOSBP53539 338 aa8.04□□□□□ -1.12
VPS8-215ENST00000460158 VPS9D1Q9Y2B5 631 aa8.04□□□□□ -1.12
VPS8-215ENST00000460158 DDX27Q96GQ7 796 aaKnown RBP8.02□□□□□ -1.13
VPS8-215ENST00000460158 JPH4Q96JJ6 628 aa8.02□□□□□ -1.13
VPS8-215ENST00000460158 PTPREP23469 700 aa8.01□□□□□ -1.13
VPS8-215ENST00000460158 MFSD10Q14728 455 aa8.01□□□□□ -1.13
VPS8-215ENST00000460158 KCTD12Q96CX2 325 aaKnown RBP8.01□□□□□ -1.13
VPS8-215ENST00000460158 LARP6Q9BRS8 491 aaKnown RBP8.01□□□□□ -1.13
VPS8-215ENST00000460158 EVI5O60447 810 aa8□□□□□ -1.13
VPS8-215ENST00000460158 WDR70Q9NW82 654 aa8□□□□□ -1.13
VPS8-215ENST00000460158 BHMG1C9JSJ3 638 aaPredicted RBP7.98□□□□□ -1.13
VPS8-215ENST00000460158 ZDHHC16Q969W1 377 aa7.98□□□□□ -1.13
VPS8-215ENST00000460158 BCANQ96GW7 911 aa7.98□□□□□ -1.13
VPS8-215ENST00000460158 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
VPS8-215ENST00000460158 ZBED2Q9BTP6 218 aa7.97□□□□□ -1.13
VPS8-215ENST00000460158 ADAM33Q9BZ11 813 aa7.95□□□□□ -1.14
VPS8-215ENST00000460158 THSD4Q6ZMP0 1018 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms