RNA–Protein interactions for RNA: ENST00000460004.1

USP34-206, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-206ENST00000460004 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
USP34-206ENST00000460004 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
USP34-206ENST00000460004 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
USP34-206ENST00000460004 PKD2Q13563 968 aa12.41□□□□□ -0.42
USP34-206ENST00000460004 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
USP34-206ENST00000460004 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
USP34-206ENST00000460004 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
USP34-206ENST00000460004 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
USP34-206ENST00000460004 RGL2O15211 777 aa12.35□□□□□ -0.43
USP34-206ENST00000460004 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
USP34-206ENST00000460004 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
USP34-206ENST00000460004 G3V3G9 751 aa12.33□□□□□ -0.44
USP34-206ENST00000460004 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
USP34-206ENST00000460004 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
USP34-206ENST00000460004 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
USP34-206ENST00000460004 ST18O60284 1047 aa12.31□□□□□ -0.44
USP34-206ENST00000460004 BIVM-ERCC5R4GMW8 1640 aa12.3□□□□□ -0.44
USP34-206ENST00000460004 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
USP34-206ENST00000460004 SOX12O15370 315 aa12.3□□□□□ -0.44
USP34-206ENST00000460004 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
USP34-206ENST00000460004 FANCD2Q9BXW9 1451 aa12.29□□□□□ -0.44
USP34-206ENST00000460004 STK25O00506 426 aa12.29□□□□□ -0.44
USP34-206ENST00000460004 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
USP34-206ENST00000460004 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
USP34-206ENST00000460004 EEA1Q15075 1411 aa12.27□□□□□ -0.45
USP34-206ENST00000460004 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
USP34-206ENST00000460004 SNPHO15079 494 aa12.24□□□□□ -0.45
USP34-206ENST00000460004 NESP48681 1621 aa12.24□□□□□ -0.45
USP34-206ENST00000460004 TMEM121BQ9BXQ6 578 aaPredicted RBP12.23□□□□□ -0.45
USP34-206ENST00000460004 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
USP34-206ENST00000460004 CUX1P39880 1505 aa12.22□□□□□ -0.45
USP34-206ENST00000460004 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
USP34-206ENST00000460004 DNMBPQ6XZF7 1577 aa12.21□□□□□ -0.46
USP34-206ENST00000460004 NLRP6P59044 892 aa12.2□□□□□ -0.46
USP34-206ENST00000460004 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
USP34-206ENST00000460004 MFRPQ9BY79 579 aa12.19□□□□□ -0.46
USP34-206ENST00000460004 KIF21AQ7Z4S6 1674 aa12.18□□□□□ -0.46
USP34-206ENST00000460004 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
USP34-206ENST00000460004 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
USP34-206ENST00000460004 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
USP34-206ENST00000460004 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
USP34-206ENST00000460004 CDAN1Q8IWY9 1227 aa12.13□□□□□ -0.47
USP34-206ENST00000460004 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
USP34-206ENST00000460004 MRC2Q9UBG0 1479 aa12.12□□□□□ -0.47
USP34-206ENST00000460004 SOGA1O94964 1423 aa12.11□□□□□ -0.47
USP34-206ENST00000460004 HOXB3P14651 431 aaPredicted RBP12.11□□□□□ -0.47
USP34-206ENST00000460004 KIF27Q86VH2 1401 aa12.11□□□□□ -0.47
USP34-206ENST00000460004 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
USP34-206ENST00000460004 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
USP34-206ENST00000460004 URB2Q14146 1524 aaKnown RBP12.1□□□□□ -0.47
USP34-206ENST00000460004 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.48
USP34-206ENST00000460004 EMP3P54852 163 aa12.06□□□□□ -0.48
USP34-206ENST00000460004 WDR62O43379 1518 aa12.06□□□□□ -0.48
USP34-206ENST00000460004 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
USP34-206ENST00000460004 KIF21BO75037 1637 aa12.05□□□□□ -0.48
USP34-206ENST00000460004 CHGAP10645 457 aaKnown RBP12.04□□□□□ -0.48
USP34-206ENST00000460004 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
USP34-206ENST00000460004 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
USP34-206ENST00000460004 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
USP34-206ENST00000460004 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
USP34-206ENST00000460004 CUX2O14529 1486 aa12.02□□□□□ -0.48
USP34-206ENST00000460004 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
USP34-206ENST00000460004 WDR97A6NE52 1622 aa12.02□□□□□ -0.49
USP34-206ENST00000460004 PPP1R37O75864 691 aa12.02□□□□□ -0.49
USP34-206ENST00000460004 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
USP34-206ENST00000460004 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
USP34-206ENST00000460004 THOC2Q8NI27 1593 aaKnown RBP12.01□□□□□ -0.49
USP34-206ENST00000460004 LOC105371045A0A1W2PR82 267 aa12□□□□□ -0.49
USP34-206ENST00000460004 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
USP34-206ENST00000460004 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
USP34-206ENST00000460004 HOXB1P14653 301 aaPredicted RBP11.98□□□□□ -0.49
USP34-206ENST00000460004 HS3ST6Q96QI5 342 aa11.98□□□□□ -0.49
USP34-206ENST00000460004 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
USP34-206ENST00000460004 IFT140Q96RY7 1462 aa11.97□□□□□ -0.49
USP34-206ENST00000460004 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
USP34-206ENST00000460004 CUL7Q14999 1698 aa11.97□□□□□ -0.49
USP34-206ENST00000460004 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
USP34-206ENST00000460004 RIMBP2O15034 1052 aa11.96□□□□□ -0.49
USP34-206ENST00000460004 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
USP34-206ENST00000460004 TNIKQ9UKE5 1360 aa11.95□□□□□ -0.5
USP34-206ENST00000460004 C2orf72A6NCS6 295 aa11.95□□□□□ -0.5
USP34-206ENST00000460004 GAPVD1Q14C86 1478 aa11.93□□□□□ -0.5
USP34-206ENST00000460004 IGF1RP08069 1367 aa11.92□□□□□ -0.5
USP34-206ENST00000460004 KIF3CO14782 793 aa11.92□□□□□ -0.5
USP34-206ENST00000460004 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
USP34-206ENST00000460004 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
USP34-206ENST00000460004 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
USP34-206ENST00000460004 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
USP34-206ENST00000460004 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
USP34-206ENST00000460004 ERBB3P21860 1342 aa11.89□□□□□ -0.51
USP34-206ENST00000460004 PBRM1Q86U86 1689 aa11.88□□□□□ -0.51
USP34-206ENST00000460004 ARSIQ5FYB1 569 aa11.88□□□□□ -0.51
USP34-206ENST00000460004 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
USP34-206ENST00000460004 TMC2Q8TDI7 906 aa11.87□□□□□ -0.51
USP34-206ENST00000460004 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.515e-8■□□□□ 10.3
USP34-206ENST00000460004 GRIN2BQ13224 1484 aa11.87□□□□□ -0.51
USP34-206ENST00000460004 TDRD9Q8NDG6 1382 aaKnown RBP11.86□□□□□ -0.51
USP34-206ENST00000460004 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
USP34-206ENST00000460004 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
USP34-206ENST00000460004 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms