RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 DCAF8L2P0C7V8 631 aa8.08□□□□□ -1.12
RBM39-220ENST00000455343 EMP3P54852 163 aa8.07□□□□□ -1.12
RBM39-220ENST00000455343 DOK7Q18PE1 504 aa8.06□□□□□ -1.12
RBM39-220ENST00000455343 BICRAQ9NZM4 1560 aa8.05□□□□□ -1.12
RBM39-220ENST00000455343 HS6ST3Q8IZP7 471 aa8.05□□□□□ -1.12
RBM39-220ENST00000455343 MYO15BQ96JP2 1530 aa8.04□□□□□ -1.12
RBM39-220ENST00000455343 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
RBM39-220ENST00000455343 HOXB1P14653 301 aaPredicted RBP8.02□□□□□ -1.13
RBM39-220ENST00000455343 FAM205CA6NFA0 338 aa8.01□□□□□ -1.13
RBM39-220ENST00000455343 RIMBP2O15034 1052 aa8.01□□□□□ -1.13
RBM39-220ENST00000455343 HS3ST6Q96QI5 342 aa8.01□□□□□ -1.13
RBM39-220ENST00000455343 POTEB3A0JP26 581 aa8□□□□□ -1.13
RBM39-220ENST00000455343 POTEBQ6S5H4 581 aa8□□□□□ -1.13
RBM39-220ENST00000455343 DNAJC5Q9H3Z4 198 aa8□□□□□ -1.13
RBM39-220ENST00000455343 KIF3CO14782 793 aa7.99□□□□□ -1.13
RBM39-220ENST00000455343 PPP1R37O75864 691 aa7.99□□□□□ -1.13
RBM39-220ENST00000455343 CHGAP10645 457 aaKnown RBP7.99□□□□□ -1.13
RBM39-220ENST00000455343 ZSWIM6Q9HCJ5 1215 aa7.99□□□□□ -1.13
RBM39-220ENST00000455343 C2orf72A6NCS6 295 aa7.97□□□□□ -1.13
RBM39-220ENST00000455343 CECR2Q9BXF3 1484 aa7.96□□□□□ -1.13
RBM39-220ENST00000455343 UNC13AQ9UPW8 1703 aa7.96□□□□□ -1.14
RBM39-220ENST00000455343 GPR153Q6NV75 609 aa7.95□□□□□ -1.14
RBM39-220ENST00000455343 SHROOM4Q9ULL8 1493 aa7.94□□□□□ -1.14
RBM39-220ENST00000455343 NKX1-1Q15270 411 aaPredicted RBP7.94□□□□□ -1.14
RBM39-220ENST00000455343 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
RBM39-220ENST00000455343 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
RBM39-220ENST00000455343 ERBB3P21860 1342 aa7.93□□□□□ -1.14
RBM39-220ENST00000455343 TMC2Q8TDI7 906 aa7.92□□□□□ -1.14
RBM39-220ENST00000455343 ARSIQ5FYB1 569 aa7.91□□□□□ -1.14
RBM39-220ENST00000455343 SPNS2Q8IVW8 549 aa7.91□□□□□ -1.14
RBM39-220ENST00000455343 CC2D2AQ9P2K1 1620 aa7.91□□□□□ -1.14
RBM39-220ENST00000455343 VARS2Q5ST30 1063 aaKnown RBP7.9□□□□□ -1.14
RBM39-220ENST00000455343 KHSRPQ92945 711 aaKnown RBP eCLIP7.89□□□□□ -1.156e-12■■■□□ 18.1
RBM39-220ENST00000455343 SLC34A2O95436 690 aa7.88□□□□□ -1.15
RBM39-220ENST00000455343 RYDENQ9NUL5 291 aaKnown RBP7.88□□□□□ -1.15
RBM39-220ENST00000455343 MMRN1Q13201 1228 aa7.87□□□□□ -1.15
RBM39-220ENST00000455343 EIF4G1Q04637 1599 aaKnown RBP7.87□□□□□ -1.15
RBM39-220ENST00000455343 ZNF316A6NFI3 1004 aaPredicted RBP7.85□□□□□ -1.15
RBM39-220ENST00000455343 ZNF687Q8N1G0 1237 aa7.85□□□□□ -1.15
RBM39-220ENST00000455343 GPHNQ9NQX3 736 aaPredicted RBP7.85□□□□□ -1.15
RBM39-220ENST00000455343 PCDHGA4Q9Y5G9 962 aa7.85□□□□□ -1.15
RBM39-220ENST00000455343 DCAF1Q9Y4B6 1507 aa7.84□□□□□ -1.15
RBM39-220ENST00000455343 NUDT7P0C024 238 aa7.84□□□□□ -1.15
RBM39-220ENST00000455343 FOXK1P85037 733 aa7.84□□□□□ -1.15
RBM39-220ENST00000455343 GTPBP6O43824 516 aaPredicted RBP7.82□□□□□ -1.16
RBM39-220ENST00000455343 DSG2Q14126 1118 aa7.82□□□□□ -1.16
RBM39-220ENST00000455343 PLPP6Q8IY26 295 aa7.82□□□□□ -1.16
RBM39-220ENST00000455343 ZCCHC6Q5VYS8 1495 aaKnown RBP7.81□□□□□ -1.16
RBM39-220ENST00000455343 CRISPLD2Q9H0B8 497 aa7.8□□□□□ -1.16
RBM39-220ENST00000455343 PTCD2Q8WV60 388 aaKnown RBP7.79□□□□□ -1.16
RBM39-220ENST00000455343 LHX6Q9UPM6 363 aa7.79□□□□□ -1.16
RBM39-220ENST00000455343 KDM4FA0A1W2PPD8 638 aa7.77□□□□□ -1.17
RBM39-220ENST00000455343 SCRIBQ14160 1630 aa7.77□□□□□ -1.17
RBM39-220ENST00000455343 NCKAP5LQ9HCH0 1330 aa7.77□□□□□ -1.17
RBM39-220ENST00000455343 PPP1R15BQ5SWA1 713 aa7.75□□□□□ -1.17
RBM39-220ENST00000455343 PBX2P40425 430 aa7.74□□□□□ -1.17
RBM39-220ENST00000455343 PSDA5PKW4 1024 aaPredicted RBP7.73□□□□□ -1.17
RBM39-220ENST00000455343 TBC1D12O60347 775 aa7.73□□□□□ -1.17
RBM39-220ENST00000455343 PDE4AP27815 886 aa7.73□□□□□ -1.17
RBM39-220ENST00000455343 POTEEQ6S8J3 1075 aa7.73□□□□□ -1.17
RBM39-220ENST00000455343 OXER1Q8TDS5 423 aa7.73□□□□□ -1.17
RBM39-220ENST00000455343 LSM11P83369 360 aaKnown RBP eCLIP7.72□□□□□ -1.171e-13■□□□□ 8.6
RBM39-220ENST00000455343 AMER1Q5JTC6 1135 aaPredicted RBP7.72□□□□□ -1.17
RBM39-220ENST00000455343 UPF1Q92900 1129 aaKnown RBP eCLIP7.71□□□□□ -1.18
RBM39-220ENST00000455343 PTGER2P43116 358 aa7.7□□□□□ -1.18
RBM39-220ENST00000455343 MFSD10Q14728 455 aa7.7□□□□□ -1.18
RBM39-220ENST00000455343 ANKRD13DQ6ZTN6 518 aa7.7□□□□□ -1.18
RBM39-220ENST00000455343 RNF166Q96A37 237 aaPredicted RBP7.7□□□□□ -1.18
RBM39-220ENST00000455343 CUX2O14529 1486 aa7.69□□□□□ -1.18
RBM39-220ENST00000455343 DDX27Q96GQ7 796 aaKnown RBP7.69□□□□□ -1.18
RBM39-220ENST00000455343 LARP6Q9BRS8 491 aaKnown RBP7.69□□□□□ -1.18
RBM39-220ENST00000455343 MYT1LQ9UL68 1186 aa7.69□□□□□ -1.18
RBM39-220ENST00000455343 AXIN2Q9Y2T1 843 aa7.69□□□□□ -1.18
RBM39-220ENST00000455343 CADPS2Q86UW7 1296 aa7.68□□□□□ -1.18
RBM39-220ENST00000455343 BBXQ8WY36 941 aaPredicted RBP7.68□□□□□ -1.18
RBM39-220ENST00000455343 RTN4Q9NQC3 1192 aaKnown RBP7.68□□□□□ -1.18
RBM39-220ENST00000455343 ARHGAP33O14559 1287 aa7.67□□□□□ -1.18
RBM39-220ENST00000455343 PPP4R3BQ5MIZ7 849 aa7.67□□□□□ -1.18
RBM39-220ENST00000455343 PSEN2P49810 448 aa7.63□□□□□ -1.19
RBM39-220ENST00000455343 DMRTA1Q5VZB9 504 aa7.62□□□□□ -1.19
RBM39-220ENST00000455343 ADGRD1Q6QNK2 874 aa7.62□□□□□ -1.19
RBM39-220ENST00000455343 ZNF454Q8N9F8 522 aa7.62□□□□□ -1.19
RBM39-220ENST00000455343 EMILIN3Q9NT22 766 aa7.62□□□□□ -1.19
RBM39-220ENST00000455343 EVI5O60447 810 aa7.61□□□□□ -1.19
RBM39-220ENST00000455343 FOSBP53539 338 aa7.61□□□□□ -1.19
RBM39-220ENST00000455343 ANO8Q9HCE9 1232 aaPredicted RBP7.61□□□□□ -1.19
RBM39-220ENST00000455343 NCAPD3P42695 1498 aa7.61□□□□□ -1.19
RBM39-220ENST00000455343 TK2O00142 265 aa7.6□□□□□ -1.19
RBM39-220ENST00000455343 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
RBM39-220ENST00000455343 KCNK17Q96T54 332 aa7.59□□□□□ -1.19
RBM39-220ENST00000455343 BCL2L12Q9HB09 334 aa7.59□□□□□ -1.19
RBM39-220ENST00000455343 ERCC6Q03468 1493 aa7.59□□□□□ -1.19
RBM39-220ENST00000455343 MAP3K9P80192 1104 aa7.58□□□□□ -1.2
RBM39-220ENST00000455343 SPRYD3Q8NCJ5 442 aa7.58□□□□□ -1.2
RBM39-220ENST00000455343 KCNH8Q96L42 1107 aa7.58□□□□□ -1.2
RBM39-220ENST00000455343 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.58□□□□□ -1.2
RBM39-220ENST00000455343 HRO43593 1189 aa7.57□□□□□ -1.2
RBM39-220ENST00000455343 CAMK2BQ13554 666 aa7.57□□□□□ -1.2
RBM39-220ENST00000455343 ZDHHC16Q969W1 377 aa7.55□□□□□ -1.2
RBM39-220ENST00000455343 PTPREP23469 700 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms