RNA–Protein interactions for RNA: ENST00000454960.1

BRPF3-207, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 3

Gene BRPF3, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-207ENST00000454960 NUP153P49790 1475 aaKnown RBP15.46■□□□□ 0.06
BRPF3-207ENST00000454960 ZMYM4Q5VZL5 1548 aa15.45■□□□□ 0.06
BRPF3-207ENST00000454960 RANGAP1P46060 587 aaPredicted RBP15.45■□□□□ 0.06
BRPF3-207ENST00000454960 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
BRPF3-207ENST00000454960 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
BRPF3-207ENST00000454960 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
BRPF3-207ENST00000454960 CEBPAP49715 358 aaPredicted RBP15.41■□□□□ 0.06
BRPF3-207ENST00000454960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.39■□□□□ 0.05
BRPF3-207ENST00000454960 ARHGEF12Q9NZN5 1544 aa15.39■□□□□ 0.05
BRPF3-207ENST00000454960 MAGI2Q86UL8 1455 aa15.39■□□□□ 0.05
BRPF3-207ENST00000454960 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
BRPF3-207ENST00000454960 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
BRPF3-207ENST00000454960 UHRF1BP1Q6BDS2 1440 aa15.37■□□□□ 0.05
BRPF3-207ENST00000454960 PLEKHD1A6NEE1 506 aa15.37■□□□□ 0.05
BRPF3-207ENST00000454960 C9orf84Q5VXU9 1444 aa15.34■□□□□ 0.05
BRPF3-207ENST00000454960 CDK13Q14004 1512 aaKnown RBP15.33■□□□□ 0.05
BRPF3-207ENST00000454960 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
BRPF3-207ENST00000454960 SCAPERQ9BY12 1400 aa15.33■□□□□ 0.04
BRPF3-207ENST00000454960 ATP10AO60312 1499 aa15.33■□□□□ 0.04
BRPF3-207ENST00000454960 LTBP4Q8N2S1 1624 aa15.32■□□□□ 0.04
BRPF3-207ENST00000454960 PTPRTO14522 1441 aa15.31■□□□□ 0.04
BRPF3-207ENST00000454960 C3P01024 1663 aa15.3■□□□□ 0.04
BRPF3-207ENST00000454960 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
BRPF3-207ENST00000454960 FMN1Q68DA7 1419 aa15.28■□□□□ 0.04
BRPF3-207ENST00000454960 IQSEC2Q5JU85 1478 aa15.27■□□□□ 0.04
BRPF3-207ENST00000454960 MYO5CQ9NQX4 1742 aa15.27■□□□□ 0.04
BRPF3-207ENST00000454960 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
BRPF3-207ENST00000454960 PLCH2O75038 1416 aa15.25■□□□□ 0.03
BRPF3-207ENST00000454960 UBAP1LF5GYI3 381 aa15.22■□□□□ 0.03
BRPF3-207ENST00000454960 KIF14Q15058 1648 aa15.21■□□□□ 0.03
BRPF3-207ENST00000454960 DIP2CQ9Y2E4 1556 aa15.21■□□□□ 0.03
BRPF3-207ENST00000454960 NCOA1Q15788 1441 aa15.21■□□□□ 0.03
BRPF3-207ENST00000454960 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
BRPF3-207ENST00000454960 ZNF518AQ6AHZ1 1483 aa15.2■□□□□ 0.02
BRPF3-207ENST00000454960 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
BRPF3-207ENST00000454960 ABCA6Q8N139 1617 aa15.19■□□□□ 0.02
BRPF3-207ENST00000454960 EFCAB2Q5VUJ9 269 aa15.19■□□□□ 0.02
BRPF3-207ENST00000454960 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
BRPF3-207ENST00000454960 SUPT6HQ7KZ85 1726 aaKnown RBP15.18■□□□□ 0.02
BRPF3-207ENST00000454960 AFAP1Q8N556 730 aa15.18■□□□□ 0.02
BRPF3-207ENST00000454960 KDM5CP41229 1560 aa15.18■□□□□ 0.02
BRPF3-207ENST00000454960 ZNF335Q9H4Z2 1342 aaPredicted RBP15.17■□□□□ 0.02
BRPF3-207ENST00000454960 CLIP1P30622 1438 aa15.17■□□□□ 0.02
BRPF3-207ENST00000454960 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
BRPF3-207ENST00000454960 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
BRPF3-207ENST00000454960 MED1Q15648 1581 aaPredicted RBP15.16■□□□□ 0.02
BRPF3-207ENST00000454960 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
BRPF3-207ENST00000454960 ATP1B4Q9UN42 357 aaPredicted RBP15.15■□□□□ 0.02
BRPF3-207ENST00000454960 TROQ12816 1431 aaPredicted RBP15.15■□□□□ 0.02
BRPF3-207ENST00000454960 NCKAP5LQ9HCH0 1330 aa15.15■□□□□ 0.02
BRPF3-207ENST00000454960 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
BRPF3-207ENST00000454960 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
BRPF3-207ENST00000454960 CCDC18Q5T9S5 1454 aa15.13■□□□□ 0.01
BRPF3-207ENST00000454960 CDC42BPBQ9Y5S2 1711 aa15.11■□□□□ 0.01
BRPF3-207ENST00000454960 AGLP35573 1532 aa15.11■□□□□ 0.01
BRPF3-207ENST00000454960 MROH2AA6NES4 1674 aa15.09■□□□□ 0.01
BRPF3-207ENST00000454960 HSPA1LP34931 641 aa15.09■□□□□ 0.01
BRPF3-207ENST00000454960 PIP4K2BP78356 416 aa15.09■□□□□ 0.01
BRPF3-207ENST00000454960 CNTLNQ9NXG0 1405 aa15.09■□□□□ 0.01
BRPF3-207ENST00000454960 MLH3Q9UHC1 1453 aa15.08■□□□□ 0.01
BRPF3-207ENST00000454960 ITSN2Q9NZM3 1697 aa15.08■□□□□ 0
BRPF3-207ENST00000454960 CEP162Q5TB80 1403 aa15.08■□□□□ 0
BRPF3-207ENST00000454960 PREX2Q70Z35 1606 aa15.07■□□□□ 0
BRPF3-207ENST00000454960 MYO3AQ8NEV4 1616 aa15.07■□□□□ 0
BRPF3-207ENST00000454960 KIDINS220Q9ULH0 1771 aa15.07■□□□□ 0
BRPF3-207ENST00000454960 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
BRPF3-207ENST00000454960 ZNF142P52746 1687 aaPredicted RBP15.06■□□□□ 0
BRPF3-207ENST00000454960 CDK11AQ9UQ88 783 aaPredicted RBP15.06■□□□□ 0
BRPF3-207ENST00000454960 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
BRPF3-207ENST00000454960 NPATQ14207 1427 aa15.05■□□□□ -0
BRPF3-207ENST00000454960 ABCC1P33527 1531 aa15.04■□□□□ -0
BRPF3-207ENST00000454960 CDC42BPAQ5VT25 1732 aa15.03■□□□□ -0
BRPF3-207ENST00000454960 CEP170BQ9Y4F5 1589 aaPredicted RBP15.03■□□□□ -0
BRPF3-207ENST00000454960 ZMYM3Q14202 1370 aa15.03■□□□□ -0
BRPF3-207ENST00000454960 PKD2Q13563 968 aa15.03■□□□□ -0
BRPF3-207ENST00000454960 PLA2R1Q13018 1463 aa15.02■□□□□ -0
BRPF3-207ENST00000454960 PPP6R1Q9UPN7 881 aa15.02■□□□□ -0
BRPF3-207ENST00000454960 TCOF1Q13428 1488 aaKnown RBP15.01□□□□□ -0.01
BRPF3-207ENST00000454960 TOM1O60784 492 aa15□□□□□ -0.01
BRPF3-207ENST00000454960 POLR1AO95602 1720 aaPredicted RBP14.98□□□□□ -0.01
BRPF3-207ENST00000454960 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
BRPF3-207ENST00000454960 SAMD9LQ8IVG5 1584 aa14.97□□□□□ -0.01
BRPF3-207ENST00000454960 EHBP1L1Q8N3D4 1523 aa14.96□□□□□ -0.02
BRPF3-207ENST00000454960 PTPRKQ15262 1439 aa14.95□□□□□ -0.02
BRPF3-207ENST00000454960 CPS1P31327 1500 aa14.95□□□□□ -0.02
BRPF3-207ENST00000454960 GPATCH8Q9UKJ3 1502 aaKnown RBP14.95□□□□□ -0.02
BRPF3-207ENST00000454960 LOC105371045A0A1W2PR82 267 aa14.94□□□□□ -0.02
BRPF3-207ENST00000454960 DNMT1P26358 1616 aaKnown RBP14.94□□□□□ -0.02
BRPF3-207ENST00000454960 TIAM1Q13009 1591 aa14.94□□□□□ -0.02
BRPF3-207ENST00000454960 SYCP2Q9BX26 1530 aa14.93□□□□□ -0.02
BRPF3-207ENST00000454960 ZNF777Q9ULD5 760 aaPredicted RBP14.93□□□□□ -0.02
BRPF3-207ENST00000454960 GGT6Q6P531 493 aa14.92□□□□□ -0.02
BRPF3-207ENST00000454960 SHANK2Q9UPX8 1470 aa14.92□□□□□ -0.02
BRPF3-207ENST00000454960 NEURL4Q96JN8 1562 aa14.91□□□□□ -0.02
BRPF3-207ENST00000454960 SPAG9O60271 1321 aaKnown RBP14.91□□□□□ -0.02
BRPF3-207ENST00000454960 A2ML1A8K2U0 1454 aa14.9□□□□□ -0.02
BRPF3-207ENST00000454960 MTUS2Q5JR59 1369 aa14.9□□□□□ -0.02
BRPF3-207ENST00000454960 VPS8Q8N3P4 1428 aa14.9□□□□□ -0.02
BRPF3-207ENST00000454960 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
BRPF3-207ENST00000454960 ALKQ9UM73 1620 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms