RNA–Protein interactions for RNA: ENST00000454716.1

RPS3AP53-201, Transcript of ribosomal protein S3a pseudogene 53, humanhuman

BASIC

Gene RPS3AP53, Length 778 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP53-201ENST00000454716 TMC2Q8TDI7 906 aa14.58□□□□□ -0.08
RPS3AP53-201ENST00000454716 NKX1-1Q15270 411 aaPredicted RBP14.57□□□□□ -0.08
RPS3AP53-201ENST00000454716 PPP1R37O75864 691 aa14.56□□□□□ -0.08
RPS3AP53-201ENST00000454716 HOXB3P14651 431 aaPredicted RBP14.55□□□□□ -0.08
RPS3AP53-201ENST00000454716 ZSWIM6Q9HCJ5 1215 aa14.55□□□□□ -0.08
RPS3AP53-201ENST00000454716 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
RPS3AP53-201ENST00000454716 EMP3P54852 163 aa14.51□□□□□ -0.09
RPS3AP53-201ENST00000454716 C2orf72A6NCS6 295 aa14.5□□□□□ -0.09
RPS3AP53-201ENST00000454716 KIF3CO14782 793 aa14.5□□□□□ -0.09
RPS3AP53-201ENST00000454716 HOXB1P14653 301 aaPredicted RBP14.48□□□□□ -0.09
RPS3AP53-201ENST00000454716 MARVELD3Q96A59 401 aa14.47□□□□□ -0.09
RPS3AP53-201ENST00000454716 GTPBP6O43824 516 aaPredicted RBP14.45□□□□□ -0.1
RPS3AP53-201ENST00000454716 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
RPS3AP53-201ENST00000454716 CDAN1Q8IWY9 1227 aa14.42□□□□□ -0.1
RPS3AP53-201ENST00000454716 GPHNQ9NQX3 736 aaPredicted RBP14.41□□□□□ -0.1
RPS3AP53-201ENST00000454716 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
RPS3AP53-201ENST00000454716 SLC34A2O95436 690 aa14.38□□□□□ -0.11
RPS3AP53-201ENST00000454716 FOXK1P85037 733 aa14.37□□□□□ -0.11
RPS3AP53-201ENST00000454716 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
RPS3AP53-201ENST00000454716 ERBB3P21860 1342 aa14.36□□□□□ -0.11
RPS3AP53-201ENST00000454716 GPR153Q6NV75 609 aa14.35□□□□□ -0.11
RPS3AP53-201ENST00000454716 PDE4AP27815 886 aa14.34□□□□□ -0.11
RPS3AP53-201ENST00000454716 HS3ST6Q96QI5 342 aa14.33□□□□□ -0.12
RPS3AP53-201ENST00000454716 ARSIQ5FYB1 569 aa14.31□□□□□ -0.12
RPS3AP53-201ENST00000454716 PLPP6Q8IY26 295 aa14.31□□□□□ -0.12
RPS3AP53-201ENST00000454716 CRISPLD2Q9H0B8 497 aa14.3□□□□□ -0.12
RPS3AP53-201ENST00000454716 TBC1D12O60347 775 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 DSG2Q14126 1118 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 PCDHGA4Q9Y5G9 962 aa14.28□□□□□ -0.12
RPS3AP53-201ENST00000454716 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
RPS3AP53-201ENST00000454716 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
RPS3AP53-201ENST00000454716 PPP1R15BQ5SWA1 713 aa14.23□□□□□ -0.13
RPS3AP53-201ENST00000454716 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
RPS3AP53-201ENST00000454716 NCKAP5LQ9HCH0 1330 aa14.2□□□□□ -0.14
RPS3AP53-201ENST00000454716 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
RPS3AP53-201ENST00000454716 LARP6Q9BRS8 491 aaKnown RBP14.2□□□□□ -0.14
RPS3AP53-201ENST00000454716 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
RPS3AP53-201ENST00000454716 NUDT7P0C024 238 aa14.19□□□□□ -0.14
RPS3AP53-201ENST00000454716 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
RPS3AP53-201ENST00000454716 PSDA5PKW4 1024 aaPredicted RBP14.18□□□□□ -0.14
RPS3AP53-201ENST00000454716 KHSRPQ92945 711 aaKnown RBP eCLIP14.18□□□□□ -0.14
RPS3AP53-201ENST00000454716 ZNF687Q8N1G0 1237 aa14.17□□□□□ -0.14
RPS3AP53-201ENST00000454716 MFSD10Q14728 455 aa14.15□□□□□ -0.14
RPS3AP53-201ENST00000454716 PAXIP1Q6ZW49 1069 aaPredicted RBP14.13□□□□□ -0.15
RPS3AP53-201ENST00000454716 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
RPS3AP53-201ENST00000454716 OXER1Q8TDS5 423 aa14.11□□□□□ -0.15
RPS3AP53-201ENST00000454716 LHX6Q9UPM6 363 aa14.11□□□□□ -0.15
RPS3AP53-201ENST00000454716 KRTAP3-3Q9BYR6 98 aa14.09□□□□□ -0.15
RPS3AP53-201ENST00000454716 KRTAP3-2Q9BYR7 98 aa14.09□□□□□ -0.15
RPS3AP53-201ENST00000454716 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPS3AP53-201ENST00000454716 PBX2P40425 430 aa14.07□□□□□ -0.16
RPS3AP53-201ENST00000454716 CADPS2Q86UW7 1296 aa14.07□□□□□ -0.16
RPS3AP53-201ENST00000454716 KDM4FA0A1W2PPD8 638 aa14.05□□□□□ -0.16
RPS3AP53-201ENST00000454716 SPNS2Q8IVW8 549 aa14.04□□□□□ -0.16
RPS3AP53-201ENST00000454716 MAP3K9P80192 1104 aa14.02□□□□□ -0.17
RPS3AP53-201ENST00000454716 PPP4R3BQ5MIZ7 849 aa14.02□□□□□ -0.17
RPS3AP53-201ENST00000454716 PTGER2P43116 358 aa13.97□□□□□ -0.17
RPS3AP53-201ENST00000454716 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
RPS3AP53-201ENST00000454716 WDR70Q9NW82 654 aa13.97□□□□□ -0.17
RPS3AP53-201ENST00000454716 EVI5O60447 810 aa13.96□□□□□ -0.17
RPS3AP53-201ENST00000454716 CAMK2BQ13554 666 aa13.95□□□□□ -0.18
RPS3AP53-201ENST00000454716 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
RPS3AP53-201ENST00000454716 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
RPS3AP53-201ENST00000454716 ARHGAP33O14559 1287 aa13.93□□□□□ -0.18
RPS3AP53-201ENST00000454716 LSM11P83369 360 aaKnown RBP eCLIP13.93□□□□□ -0.18
RPS3AP53-201ENST00000454716 EMILIN3Q9NT22 766 aa13.93□□□□□ -0.18
RPS3AP53-201ENST00000454716 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
RPS3AP53-201ENST00000454716 ZNF454Q8N9F8 522 aa13.9□□□□□ -0.18
RPS3AP53-201ENST00000454716 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
RPS3AP53-201ENST00000454716 FOSBP53539 338 aa13.86□□□□□ -0.19
RPS3AP53-201ENST00000454716 E2F4Q16254 413 aa13.85□□□□□ -0.19
RPS3AP53-201ENST00000454716 AXIN2Q9Y2T1 843 aa13.85□□□□□ -0.19
RPS3AP53-201ENST00000454716 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
RPS3AP53-201ENST00000454716 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
RPS3AP53-201ENST00000454716 TK2O00142 265 aa13.82□□□□□ -0.2
RPS3AP53-201ENST00000454716 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
RPS3AP53-201ENST00000454716 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
RPS3AP53-201ENST00000454716 DPYSL4O14531 572 aa13.81□□□□□ -0.2
RPS3AP53-201ENST00000454716 SPDYE16A6NNV3 312 aaPredicted RBP13.8□□□□□ -0.2
RPS3AP53-201ENST00000454716 PTPREP23469 700 aa13.8□□□□□ -0.2
RPS3AP53-201ENST00000454716 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
RPS3AP53-201ENST00000454716 KCNK17Q96T54 332 aa13.8□□□□□ -0.2
RPS3AP53-201ENST00000454716 PHF14O94880 888 aa13.78□□□□□ -0.2
RPS3AP53-201ENST00000454716 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
RPS3AP53-201ENST00000454716 PSEN2P49810 448 aa13.77□□□□□ -0.21
RPS3AP53-201ENST00000454716 ADGRD1Q6QNK2 874 aa13.77□□□□□ -0.21
RPS3AP53-201ENST00000454716 EPAS1Q99814 870 aa13.77□□□□□ -0.21
RPS3AP53-201ENST00000454716 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
RPS3AP53-201ENST00000454716 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
RPS3AP53-201ENST00000454716 ARIH1Q9Y4X5 557 aaPredicted RBP13.76□□□□□ -0.21
RPS3AP53-201ENST00000454716 TSHZ2Q9NRE2 1034 aa13.75□□□□□ -0.21
RPS3AP53-201ENST00000454716 PDIA6Q15084 440 aa13.74□□□□□ -0.21
RPS3AP53-201ENST00000454716 PCDHGA10Q9Y5H3 936 aa13.73□□□□□ -0.21
RPS3AP53-201ENST00000454716 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
RPS3AP53-201ENST00000454716 DMRTA1Q5VZB9 504 aa13.72□□□□□ -0.21
RPS3AP53-201ENST00000454716 SLC4A5Q9BY07 1137 aa13.72□□□□□ -0.21
RPS3AP53-201ENST00000454716 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
RPS3AP53-201ENST00000454716 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms