RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 CHIC2Q9UKJ5 165 aa36.3■■■■□ 3.4
MCF2L-219ENST00000453297 AKNAQ7Z591 1439 aa36.3■■■■□ 3.4
MCF2L-219ENST00000453297 GCC2Q8IWJ2 1684 aa36.29■■■■□ 3.4
MCF2L-219ENST00000453297 ZNF777Q9ULD5 760 aaPredicted RBP36.27■■■■□ 3.4
MCF2L-219ENST00000453297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.27■■■■□ 3.4
MCF2L-219ENST00000453297 PREX2Q70Z35 1606 aa36.27■■■■□ 3.4
MCF2L-219ENST00000453297 TTC37Q6PGP7 1564 aa36.25■■■■□ 3.39
MCF2L-219ENST00000453297 CDC42BPBQ9Y5S2 1711 aa36.25■■■■□ 3.39
MCF2L-219ENST00000453297 RRP7BPQ9NSQ0 103 aa36.23■■■■□ 3.39
MCF2L-219ENST00000453297 ROCK1Q13464 1354 aa36.21■■■■□ 3.39
MCF2L-219ENST00000453297 CROCC2H7BZ55 1655 aa36.19■■■■□ 3.38
MCF2L-219ENST00000453297 MAPKBP1O60336 1514 aa36.19■■■■□ 3.38
MCF2L-219ENST00000453297 KCNH8Q96L42 1107 aa36.18■■■■□ 3.38
MCF2L-219ENST00000453297 MYO5CQ9NQX4 1742 aa36.17■■■■□ 3.38
MCF2L-219ENST00000453297 ADGBQ8N7X0 1667 aa36.13■■■■□ 3.37
MCF2L-219ENST00000453297 SAMD9LQ8IVG5 1584 aa36.12■■■■□ 3.37
MCF2L-219ENST00000453297 KDM6BO15054 1643 aa36.1■■■■□ 3.37
MCF2L-219ENST00000453297 WDR7Q9Y4E6 1490 aa36.08■■■■□ 3.37
MCF2L-219ENST00000453297 ARHGAP5Q13017 1502 aa36.08■■■■□ 3.37
MCF2L-219ENST00000453297 ARHGEF5Q12774 1597 aa36.08■■■■□ 3.37
MCF2L-219ENST00000453297 ADGRL2O95490 1459 aa36.06■■■■□ 3.36
MCF2L-219ENST00000453297 MBD5Q9P267 1494 aa36.03■■■■□ 3.36
MCF2L-219ENST00000453297 SHANK2Q9UPX8 1470 aa36.03■■■■□ 3.36
MCF2L-219ENST00000453297 PLCH2O75038 1416 aa36.02■■■■□ 3.36
MCF2L-219ENST00000453297 NCOA1Q15788 1441 aa36.02■■■■□ 3.36
MCF2L-219ENST00000453297 HNRNPMP52272 730 aaKnown RBP eCLIP36■■■■□ 3.35
MCF2L-219ENST00000453297 ASXL2Q76L83 1435 aa35.99■■■■□ 3.35
MCF2L-219ENST00000453297 NPM1P06748 294 aaKnown RBP eCLIP35.97■■■■□ 3.35
MCF2L-219ENST00000453297 C9orf84Q5VXU9 1444 aa35.96■■■■□ 3.35
MCF2L-219ENST00000453297 ANKRD30AQ9BXX3 1397 aa35.95■■■■□ 3.35
MCF2L-219ENST00000453297 CCDC141Q6ZP82 1450 aa35.94■■■■□ 3.34
MCF2L-219ENST00000453297 SYCP2Q9BX26 1530 aa35.94■■■■□ 3.34
MCF2L-219ENST00000453297 RSPH4AQ5TD94 716 aa35.94■■■■□ 3.34
MCF2L-219ENST00000453297 PLEKHH2Q8IVE3 1493 aa35.93■■■■□ 3.34
MCF2L-219ENST00000453297 ACIN1Q9UKV3 1341 aaKnown RBP35.93■■■■□ 3.34
MCF2L-219ENST00000453297 TSPY4P0CV99 314 aa35.92■■■■□ 3.34
MCF2L-219ENST00000453297 TSPY10P0CW01 314 aa35.92■■■■□ 3.34
MCF2L-219ENST00000453297 ABCA9Q8IUA7 1624 aa35.92■■■■□ 3.34
MCF2L-219ENST00000453297 ARAP3Q8WWN8 1544 aa35.91■■■■□ 3.34
MCF2L-219ENST00000453297 KIAA1107Q9UPP5 1409 aa35.91■■■■□ 3.34
MCF2L-219ENST00000453297 EFCAB2Q5VUJ9 269 aa35.9■■■■□ 3.34
MCF2L-219ENST00000453297 TRIM52Q96A61 297 aa35.88■■■■□ 3.33
MCF2L-219ENST00000453297 RIMBP3CA6NJZ7 1639 aa35.87■■■■□ 3.33
MCF2L-219ENST00000453297 RIMBP3BA6NNM3 1639 aa35.87■■■■□ 3.33
MCF2L-219ENST00000453297 RIMBP3Q9UFD9 1639 aa35.87■■■■□ 3.33
MCF2L-219ENST00000453297 SIN3AQ96ST3 1273 aa35.83■■■■□ 3.33
MCF2L-219ENST00000453297 MAST1Q9Y2H9 1570 aa35.83■■■■□ 3.33
MCF2L-219ENST00000453297 ARHGEF12Q9NZN5 1544 aa35.82■■■■□ 3.32
MCF2L-219ENST00000453297 ABCC1P33527 1531 aa35.81■■■■□ 3.32
MCF2L-219ENST00000453297 DENND4BO75064 1496 aaPredicted RBP35.8■■■■□ 3.32
MCF2L-219ENST00000453297 ANKRD50Q9ULJ7 1429 aa35.77■■■■□ 3.32
MCF2L-219ENST00000453297 MPHOSPH9Q99550 1183 aa35.76■■■■□ 3.32
MCF2L-219ENST00000453297 NEUROD1Q13562 356 aa35.76■■■■□ 3.31
MCF2L-219ENST00000453297 KIF15Q9NS87 1388 aa35.74■■■■□ 3.31
MCF2L-219ENST00000453297 CYB5RLQ6IPT4 315 aa35.73■■■■□ 3.31
MCF2L-219ENST00000453297 FANCAO15360 1455 aa35.7■■■■□ 3.31
MCF2L-219ENST00000453297 TIMELESSQ9UNS1 1208 aa35.7■■■■□ 3.31
MCF2L-219ENST00000453297 PLXNC1O60486 1568 aa35.68■■■■□ 3.3
MCF2L-219ENST00000453297 TRAPPC8Q9Y2L5 1435 aa35.67■■■■□ 3.3
MCF2L-219ENST00000453297 PZPP20742 1482 aa35.65■■■■□ 3.3
MCF2L-219ENST00000453297 ZNF316A6NFI3 1004 aaPredicted RBP35.62■■■■□ 3.29
MCF2L-219ENST00000453297 SLC4A1APQ9BWU0 796 aaKnown RBP35.6■■■■□ 3.29
MCF2L-219ENST00000453297 CD109Q6YHK3 1445 aa35.57■■■■□ 3.29
MCF2L-219ENST00000453297 ADGRL1O94910 1474 aa35.56■■■■□ 3.28
MCF2L-219ENST00000453297 KDM5DQ9BY66 1539 aa35.55■■■■□ 3.28
MCF2L-219ENST00000453297 FOXD1Q16676 465 aa35.54■■■■□ 3.28
MCF2L-219ENST00000453297 DUOX2Q9NRD8 1548 aa35.53■■■■□ 3.28
MCF2L-219ENST00000453297 TONSLQ96HA7 1378 aa35.52■■■■□ 3.28
MCF2L-219ENST00000453297 AFAP1Q8N556 730 aa35.52■■■■□ 3.28
MCF2L-219ENST00000453297 RTEL1-TNFRSF6BF6WH68 1400 aa35.52■■■■□ 3.28
MCF2L-219ENST00000453297 SCAPERQ9BY12 1400 aa35.52■■■■□ 3.28
MCF2L-219ENST00000453297 CFAP74Q9C0B2 1584 aa35.52■■■■□ 3.28
MCF2L-219ENST00000453297 ANKRD30BQ9BXX2 1392 aa35.51■■■■□ 3.28
MCF2L-219ENST00000453297 NUP155O75694 1391 aa35.51■■■■□ 3.27
MCF2L-219ENST00000453297 SPAG9O60271 1321 aaKnown RBP35.5■■■■□ 3.27
MCF2L-219ENST00000453297 ZFYVE16Q7Z3T8 1539 aa35.48■■■■□ 3.27
MCF2L-219ENST00000453297 PPP1R15AO75807 674 aaPredicted RBP35.47■■■■□ 3.27
MCF2L-219ENST00000453297 UNC13BO14795 1591 aa35.44■■■■□ 3.26
MCF2L-219ENST00000453297 INO80Q9ULG1 1556 aaPredicted RBP35.44■■■■□ 3.26
MCF2L-219ENST00000453297 ERBINQ96RT1 1412 aa35.44■■■■□ 3.26
MCF2L-219ENST00000453297 PKD2Q13563 968 aa35.41■■■■□ 3.26
MCF2L-219ENST00000453297 ATP7AQ04656 1500 aa35.41■■■■□ 3.26
MCF2L-219ENST00000453297 GLI2P10070 1586 aa35.4■■■■□ 3.26
MCF2L-219ENST00000453297 MAP3K4Q9Y6R4 1608 aa35.4■■■■□ 3.26
MCF2L-219ENST00000453297 RPRD2Q5VT52 1461 aaKnown RBP35.37■■■■□ 3.25
MCF2L-219ENST00000453297 FAM135AQ9P2D6 1515 aa35.36■■■■□ 3.25
MCF2L-219ENST00000453297 NEO1Q92859 1461 aa35.35■■■■□ 3.25
MCF2L-219ENST00000453297 ZNF518AQ6AHZ1 1483 aa35.34■■■■□ 3.25
MCF2L-219ENST00000453297 MAGI2Q86UL8 1455 aa35.31■■■■□ 3.24
MCF2L-219ENST00000453297 IQGAP3Q86VI3 1631 aa35.31■■■■□ 3.24
MCF2L-219ENST00000453297 DIP2BQ9P265 1576 aa35.3■■■■□ 3.24
MCF2L-219ENST00000453297 DIEXFQ68CQ4 756 aaKnown RBP35.29■■■■□ 3.24
MCF2L-219ENST00000453297 KIDINS220Q9ULH0 1771 aa35.29■■■■□ 3.24
MCF2L-219ENST00000453297 POGZQ7Z3K3 1410 aa35.29■■■■□ 3.24
MCF2L-219ENST00000453297 KDM5CP41229 1560 aa35.27■■■■□ 3.24
MCF2L-219ENST00000453297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.25■■■■□ 3.238e-7■■□□□ 13.6
MCF2L-219ENST00000453297 MYT1LQ9UL68 1186 aa35.25■■■■□ 3.23
MCF2L-219ENST00000453297 L3MBTL2Q969R5 705 aa35.21■■■■□ 3.23
MCF2L-219ENST00000453297 FAM69CQ0P6D2 419 aa35.2■■■■□ 3.23
MCF2L-219ENST00000453297 TEX14Q8IWB6 1497 aa35.2■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms