RNA–Protein interactions for RNA: ENST00000451538.1

CUL3-207, Transcript of cullin 3, humanhuman

TSL 5

Gene CUL3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-207ENST00000451538 GOLGA2Q08379 1002 aa14.53□□□□□ -0.08
CUL3-207ENST00000451538 MKRN3Q13064 507 aaKnown RBP14.53□□□□□ -0.08
CUL3-207ENST00000451538 CADPS2Q86UW7 1296 aa14.53□□□□□ -0.08
CUL3-207ENST00000451538 MFRPQ9BY79 579 aa14.53□□□□□ -0.08
CUL3-207ENST00000451538 L3MBTL3Q96JM7 780 aaPredicted RBP14.5□□□□□ -0.09
CUL3-207ENST00000451538 KCNV2Q8TDN2 545 aa14.47□□□□□ -0.09
CUL3-207ENST00000451538 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
CUL3-207ENST00000451538 C3orf67Q6ZVT6 689 aa14.46□□□□□ -0.09
CUL3-207ENST00000451538 EFCAB3Q8N7B9 438 aa14.45□□□□□ -0.1
CUL3-207ENST00000451538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.45□□□□□ -0.12e-16■■■□□ 17
CUL3-207ENST00000451538 NLRP6P59044 892 aa14.44□□□□□ -0.1
CUL3-207ENST00000451538 MARVELD3Q96A59 401 aa14.42□□□□□ -0.1
CUL3-207ENST00000451538 SOX12O15370 315 aa14.4□□□□□ -0.1
CUL3-207ENST00000451538 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
CUL3-207ENST00000451538 PPP1R37O75864 691 aa14.37□□□□□ -0.11
CUL3-207ENST00000451538 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
CUL3-207ENST00000451538 SPNS2Q8IVW8 549 aa14.37□□□□□ -0.11
CUL3-207ENST00000451538 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
CUL3-207ENST00000451538 FBXO22Q8NEZ5 403 aa14.36□□□□□ -0.11
CUL3-207ENST00000451538 MMRN1Q13201 1228 aa14.35□□□□□ -0.11
CUL3-207ENST00000451538 LMOD2Q6P5Q4 547 aa14.33□□□□□ -0.12
CUL3-207ENST00000451538 EMP3P54852 163 aa14.31□□□□□ -0.12
CUL3-207ENST00000451538 E2F4Q16254 413 aa14.29□□□□□ -0.12
CUL3-207ENST00000451538 DPY19L2Q6NUT2 758 aa14.28□□□□□ -0.12
CUL3-207ENST00000451538 ARHGEF1Q92888 912 aaKnown RBP14.27□□□□□ -0.13
CUL3-207ENST00000451538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.26□□□□□ -0.13
CUL3-207ENST00000451538 G3V3G9 751 aa14.24□□□□□ -0.13
CUL3-207ENST00000451538 BOLA1Q9Y3E2 137 aa14.24□□□□□ -0.13
CUL3-207ENST00000451538 HS3ST6Q96QI5 342 aa14.23□□□□□ -0.13
CUL3-207ENST00000451538 FAM205CA6NFA0 338 aa14.21□□□□□ -0.13
CUL3-207ENST00000451538 POTEB3A0JP26 581 aa14.2□□□□□ -0.14
CUL3-207ENST00000451538 POTEBQ6S5H4 581 aa14.2□□□□□ -0.14
CUL3-207ENST00000451538 LARP6Q9BRS8 491 aaKnown RBP14.2□□□□□ -0.14
CUL3-207ENST00000451538 PDE4AP27815 886 aa14.19□□□□□ -0.14
CUL3-207ENST00000451538 MS4A4AQ96JQ5 239 aa14.18□□□□□ -0.14
CUL3-207ENST00000451538 NCKAP5LQ9HCH0 1330 aa14.17□□□□□ -0.14
CUL3-207ENST00000451538 KRTAP3-3Q9BYR6 98 aa14.17□□□□□ -0.14
CUL3-207ENST00000451538 KRTAP3-2Q9BYR7 98 aa14.17□□□□□ -0.14
CUL3-207ENST00000451538 HOXB3P14651 431 aaPredicted RBP14.15□□□□□ -0.14
CUL3-207ENST00000451538 SEMA3EO15041 775 aa14.14□□□□□ -0.15
CUL3-207ENST00000451538 DDX27Q96GQ7 796 aaKnown RBP14.13□□□□□ -0.15
CUL3-207ENST00000451538 TESPA1A2RU30 521 aaPredicted RBP14.1□□□□□ -0.15
CUL3-207ENST00000451538 CRISPLD2Q9H0B8 497 aa14.1□□□□□ -0.15
CUL3-207ENST00000451538 HOXB1P14653 301 aaPredicted RBP14.09□□□□□ -0.15
CUL3-207ENST00000451538 MFSD10Q14728 455 aa14.09□□□□□ -0.15
CUL3-207ENST00000451538 TMEM132AQ24JP5 1023 aa14.09□□□□□ -0.15
CUL3-207ENST00000451538 ZNF710Q8N1W2 664 aa14.09□□□□□ -0.15
CUL3-207ENST00000451538 DOK7Q18PE1 504 aa14.08□□□□□ -0.16
CUL3-207ENST00000451538 GTF3C3Q9Y5Q9 886 aa14.08□□□□□ -0.16
CUL3-207ENST00000451538 SMYD5Q6GMV2 418 aa14.07□□□□□ -0.16
CUL3-207ENST00000451538 ZC3H15Q8WU90 426 aaKnown RBP14.07□□□□□ -0.16
CUL3-207ENST00000451538 ERBB3P21860 1342 aa14□□□□□ -0.17
CUL3-207ENST00000451538 RIMBP2O15034 1052 aa14□□□□□ -0.17
CUL3-207ENST00000451538 TIMELESSQ9UNS1 1208 aa13.98□□□□□ -0.17
CUL3-207ENST00000451538 CAMK2BQ13554 666 aa13.97□□□□□ -0.17
CUL3-207ENST00000451538 MICALL2Q8IY33 904 aa13.97□□□□□ -0.17
CUL3-207ENST00000451538 ARIH1Q9Y4X5 557 aaPredicted RBP13.97□□□□□ -0.17
CUL3-207ENST00000451538 PPP1R15BQ5SWA1 713 aa13.96□□□□□ -0.17
CUL3-207ENST00000451538 SLC24A3Q9HC58 644 aa13.96□□□□□ -0.17
CUL3-207ENST00000451538 BRPF1P55201 1214 aaPredicted RBP13.95□□□□□ -0.18
CUL3-207ENST00000451538 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
CUL3-207ENST00000451538 TMEM92Q6UXU6 159 aa13.93□□□□□ -0.18
CUL3-207ENST00000451538 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
CUL3-207ENST00000451538 ERICH6Q7L0X2 663 aa13.91□□□□□ -0.18
CUL3-207ENST00000451538 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
CUL3-207ENST00000451538 VARS2Q5ST30 1063 aaKnown RBP13.89□□□□□ -0.19
CUL3-207ENST00000451538 ZMYND10O75800 440 aa13.87□□□□□ -0.19
CUL3-207ENST00000451538 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
CUL3-207ENST00000451538 GPR153Q6NV75 609 aa13.85□□□□□ -0.19
CUL3-207ENST00000451538 GPIHBP1Q8IV16 184 aa13.85□□□□□ -0.19
CUL3-207ENST00000451538 DPYSL4O14531 572 aa13.84□□□□□ -0.19
CUL3-207ENST00000451538 MLLT3P42568 568 aaPredicted RBP13.84□□□□□ -0.19
CUL3-207ENST00000451538 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
CUL3-207ENST00000451538 ZNF687Q8N1G0 1237 aa13.83□□□□□ -0.2
CUL3-207ENST00000451538 DSG2Q14126 1118 aa13.82□□□□□ -0.2
CUL3-207ENST00000451538 RNF166Q96A37 237 aaPredicted RBP13.81□□□□□ -0.2
CUL3-207ENST00000451538 SPDYE16A6NNV3 312 aaPredicted RBP13.79□□□□□ -0.2
CUL3-207ENST00000451538 BARGINQ6ZT62 677 aa13.79□□□□□ -0.2
CUL3-207ENST00000451538 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
CUL3-207ENST00000451538 C14orf37Q86TY3 774 aa13.78□□□□□ -0.2
CUL3-207ENST00000451538 KRI1Q8N9T8 703 aaKnown RBP13.78□□□□□ -0.2
CUL3-207ENST00000451538 PDIA6Q15084 440 aa13.77□□□□□ -0.21
CUL3-207ENST00000451538 FOXK1P85037 733 aa13.76□□□□□ -0.21
CUL3-207ENST00000451538 MYT1LQ9UL68 1186 aa13.76□□□□□ -0.21
CUL3-207ENST00000451538 ARSIQ5FYB1 569 aa13.74□□□□□ -0.21
CUL3-207ENST00000451538 AK7Q96M32 723 aa13.73□□□□□ -0.21
CUL3-207ENST00000451538 PLPP6Q8IY26 295 aa13.72□□□□□ -0.21
CUL3-207ENST00000451538 C2orf72A6NCS6 295 aa13.69□□□□□ -0.22
CUL3-207ENST00000451538 PTGER2P43116 358 aa13.69□□□□□ -0.22
CUL3-207ENST00000451538 ZNF316A6NFI3 1004 aaPredicted RBP13.67□□□□□ -0.22
CUL3-207ENST00000451538 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
CUL3-207ENST00000451538 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.224e-10■■■□□ 16
CUL3-207ENST00000451538 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
CUL3-207ENST00000451538 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
CUL3-207ENST00000451538 UPF1Q92900 1129 aaKnown RBP eCLIP13.63□□□□□ -0.23
CUL3-207ENST00000451538 GPBP1L1Q9HC44 474 aaPredicted RBP13.63□□□□□ -0.23
CUL3-207ENST00000451538 KIF3CO14782 793 aa13.61□□□□□ -0.23
CUL3-207ENST00000451538 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
CUL3-207ENST00000451538 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
CUL3-207ENST00000451538 TRIM66O15016 1216 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms