RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
NECAP1-202ENST00000450991 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
NECAP1-202ENST00000450991 CDC42BPBQ9Y5S2 1711 aa12.32□□□□□ -0.44
NECAP1-202ENST00000450991 DHX57Q6P158 1386 aaKnown RBP12.31□□□□□ -0.44
NECAP1-202ENST00000450991 PREX2Q70Z35 1606 aa12.31□□□□□ -0.44
NECAP1-202ENST00000450991 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
NECAP1-202ENST00000450991 MYO5CQ9NQX4 1742 aa12.29□□□□□ -0.44
NECAP1-202ENST00000450991 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
NECAP1-202ENST00000450991 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
NECAP1-202ENST00000450991 CAMSAP2Q08AD1 1489 aa12.28□□□□□ -0.44
NECAP1-202ENST00000450991 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
NECAP1-202ENST00000450991 TTC37Q6PGP7 1564 aa12.28□□□□□ -0.44
NECAP1-202ENST00000450991 RIMBP3CA6NJZ7 1639 aa12.28□□□□□ -0.44
NECAP1-202ENST00000450991 RIMBP3BA6NNM3 1639 aa12.28□□□□□ -0.44
NECAP1-202ENST00000450991 RIMBP3Q9UFD9 1639 aa12.28□□□□□ -0.44
NECAP1-202ENST00000450991 AKNAQ7Z591 1439 aa12.27□□□□□ -0.45
NECAP1-202ENST00000450991 ASXL2Q76L83 1435 aa12.26□□□□□ -0.45
NECAP1-202ENST00000450991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.26□□□□□ -0.45
NECAP1-202ENST00000450991 DAPK1P53355 1430 aa12.26□□□□□ -0.45
NECAP1-202ENST00000450991 NAIPQ13075 1403 aa12.26□□□□□ -0.45
NECAP1-202ENST00000450991 WDR7Q9Y4E6 1490 aa12.26□□□□□ -0.45
NECAP1-202ENST00000450991 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
NECAP1-202ENST00000450991 ABCC5O15440 1437 aa12.24□□□□□ -0.45
NECAP1-202ENST00000450991 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
NECAP1-202ENST00000450991 MAPKBP1O60336 1514 aa12.24□□□□□ -0.45
NECAP1-202ENST00000450991 SAMD9LQ8IVG5 1584 aa12.23□□□□□ -0.45
NECAP1-202ENST00000450991 KDM6BO15054 1643 aa12.23□□□□□ -0.45
NECAP1-202ENST00000450991 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
NECAP1-202ENST00000450991 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.45
NECAP1-202ENST00000450991 ROCK1Q13464 1354 aa12.21□□□□□ -0.46
NECAP1-202ENST00000450991 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.46
NECAP1-202ENST00000450991 ADGRL2O95490 1459 aa12.19□□□□□ -0.46
NECAP1-202ENST00000450991 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
NECAP1-202ENST00000450991 PLCH2O75038 1416 aa12.18□□□□□ -0.46
NECAP1-202ENST00000450991 ABCA9Q8IUA7 1624 aa12.17□□□□□ -0.46
NECAP1-202ENST00000450991 EFCAB2Q5VUJ9 269 aa12.17□□□□□ -0.46
NECAP1-202ENST00000450991 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
NECAP1-202ENST00000450991 MBD5Q9P267 1494 aa12.16□□□□□ -0.46
NECAP1-202ENST00000450991 SYCP2Q9BX26 1530 aa12.15□□□□□ -0.47
NECAP1-202ENST00000450991 MAST1Q9Y2H9 1570 aa12.14□□□□□ -0.47
NECAP1-202ENST00000450991 NCOA1Q15788 1441 aa12.14□□□□□ -0.47
NECAP1-202ENST00000450991 TSPY4P0CV99 314 aa12.13□□□□□ -0.47
NECAP1-202ENST00000450991 TSPY10P0CW01 314 aa12.13□□□□□ -0.47
NECAP1-202ENST00000450991 ARHGEF12Q9NZN5 1544 aa12.13□□□□□ -0.47
NECAP1-202ENST00000450991 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
NECAP1-202ENST00000450991 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
NECAP1-202ENST00000450991 ABCC1P33527 1531 aa12.12□□□□□ -0.47
NECAP1-202ENST00000450991 CD109Q6YHK3 1445 aa12.12□□□□□ -0.47
NECAP1-202ENST00000450991 PLEKHH2Q8IVE3 1493 aa12.12□□□□□ -0.47
NECAP1-202ENST00000450991 FANCAO15360 1455 aa12.11□□□□□ -0.47
NECAP1-202ENST00000450991 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
NECAP1-202ENST00000450991 DENND4BO75064 1496 aaPredicted RBP12.11□□□□□ -0.47
NECAP1-202ENST00000450991 ANKRD30AQ9BXX3 1397 aa12.1□□□□□ -0.47
NECAP1-202ENST00000450991 TRAPPC8Q9Y2L5 1435 aa12.1□□□□□ -0.47
NECAP1-202ENST00000450991 AFAP1Q8N556 730 aa12.1□□□□□ -0.47
NECAP1-202ENST00000450991 TRIM52Q96A61 297 aa12.1□□□□□ -0.47
NECAP1-202ENST00000450991 PLXNC1O60486 1568 aa12.1□□□□□ -0.47
NECAP1-202ENST00000450991 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
NECAP1-202ENST00000450991 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
NECAP1-202ENST00000450991 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
NECAP1-202ENST00000450991 ACIN1Q9UKV3 1341 aaKnown RBP12.08□□□□□ -0.48
NECAP1-202ENST00000450991 KIF15Q9NS87 1388 aa12.07□□□□□ -0.48
NECAP1-202ENST00000450991 ADGRL1O94910 1474 aa12.07□□□□□ -0.48
NECAP1-202ENST00000450991 SCAPERQ9BY12 1400 aa12.07□□□□□ -0.48
NECAP1-202ENST00000450991 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
NECAP1-202ENST00000450991 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
NECAP1-202ENST00000450991 SPAG9O60271 1321 aaKnown RBP12.04□□□□□ -0.48
NECAP1-202ENST00000450991 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
NECAP1-202ENST00000450991 KDM5DQ9BY66 1539 aa12.04□□□□□ -0.48
NECAP1-202ENST00000450991 PZPP20742 1482 aa12.04□□□□□ -0.48
NECAP1-202ENST00000450991 SIN3AQ96ST3 1273 aa12.03□□□□□ -0.48
NECAP1-202ENST00000450991 UNC13BO14795 1591 aa12.03□□□□□ -0.48
NECAP1-202ENST00000450991 INO80Q9ULG1 1556 aaPredicted RBP12.02□□□□□ -0.49
NECAP1-202ENST00000450991 DIP2BQ9P265 1576 aa12.02□□□□□ -0.49
NECAP1-202ENST00000450991 FOXD1Q16676 465 aa12.01□□□□□ -0.49
NECAP1-202ENST00000450991 MPHOSPH9Q99550 1183 aa12.01□□□□□ -0.49
NECAP1-202ENST00000450991 ZFYVE16Q7Z3T8 1539 aa12.01□□□□□ -0.49
NECAP1-202ENST00000450991 MAP3K4Q9Y6R4 1608 aa12.01□□□□□ -0.49
NECAP1-202ENST00000450991 RAPGEF3O95398 923 aa12.01□□□□□ -0.49
NECAP1-202ENST00000450991 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
NECAP1-202ENST00000450991 DUOX2Q9NRD8 1548 aa12□□□□□ -0.49
NECAP1-202ENST00000450991 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
NECAP1-202ENST00000450991 GLI2P10070 1586 aa11.99□□□□□ -0.49
NECAP1-202ENST00000450991 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
NECAP1-202ENST00000450991 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
NECAP1-202ENST00000450991 RTEL1-TNFRSF6BF6WH68 1400 aa11.98□□□□□ -0.49
NECAP1-202ENST00000450991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.49
NECAP1-202ENST00000450991 IQGAP3Q86VI3 1631 aa11.98□□□□□ -0.49
NECAP1-202ENST00000450991 NUP155O75694 1391 aa11.97□□□□□ -0.49
NECAP1-202ENST00000450991 POGZQ7Z3K3 1410 aa11.97□□□□□ -0.49
NECAP1-202ENST00000450991 NEO1Q92859 1461 aa11.97□□□□□ -0.49
NECAP1-202ENST00000450991 ATP7AQ04656 1500 aa11.97□□□□□ -0.49
NECAP1-202ENST00000450991 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
NECAP1-202ENST00000450991 ZNF518AQ6AHZ1 1483 aa11.96□□□□□ -0.49
NECAP1-202ENST00000450991 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
NECAP1-202ENST00000450991 ANKRD30BQ9BXX2 1392 aa11.96□□□□□ -0.49
NECAP1-202ENST00000450991 ERBINQ96RT1 1412 aa11.96□□□□□ -0.5
NECAP1-202ENST00000450991 MAGI2Q86UL8 1455 aa11.96□□□□□ -0.5
NECAP1-202ENST00000450991 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
NECAP1-202ENST00000450991 KDM5CP41229 1560 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms