RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 VGFO15240 615 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P8-201ENST00000449709 STK25O00506 426 aa6.12□□□□□ -1.43
HMGB3P8-201ENST00000449709 SNPHO15079 494 aa6.12□□□□□ -1.43
HMGB3P8-201ENST00000449709 MARVELD3Q96A59 401 aa6.12□□□□□ -1.43
HMGB3P8-201ENST00000449709 BOLA1Q9Y3E2 137 aa6.12□□□□□ -1.43
HMGB3P8-201ENST00000449709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P8-201ENST00000449709 ZFP91Q96JP5 570 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P8-201ENST00000449709 G3V3G9 751 aa6.09□□□□□ -1.43
HMGB3P8-201ENST00000449709 TMEM121BQ9BXQ6 578 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P8-201ENST00000449709 TIMELESSQ9UNS1 1208 aa6.09□□□□□ -1.43
HMGB3P8-201ENST00000449709 GTF3C3Q9Y5Q9 886 aa6.08□□□□□ -1.44
HMGB3P8-201ENST00000449709 RYDENQ9NUL5 291 aaKnown RBP6.07□□□□□ -1.44
HMGB3P8-201ENST00000449709 TULP1O00294 542 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P8-201ENST00000449709 MS4A4AQ96JQ5 239 aa6.06□□□□□ -1.44
HMGB3P8-201ENST00000449709 BCL11BQ9C0K0 894 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P8-201ENST00000449709 PHF8Q9UPP1 1060 aa6.06□□□□□ -1.44
HMGB3P8-201ENST00000449709 STK24Q9Y6E0 443 aa6.06□□□□□ -1.44
HMGB3P8-201ENST00000449709 SOX12O15370 315 aa6.05□□□□□ -1.44
HMGB3P8-201ENST00000449709 HOXB3P14651 431 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P8-201ENST00000449709 POTEB3A0JP26 581 aa6.04□□□□□ -1.44
HMGB3P8-201ENST00000449709 EMP3P54852 163 aa6.04□□□□□ -1.44
HMGB3P8-201ENST00000449709 POTEBQ6S5H4 581 aa6.04□□□□□ -1.44
HMGB3P8-201ENST00000449709 MICALL2Q8IY33 904 aa6.04□□□□□ -1.44
HMGB3P8-201ENST00000449709 TMEM132AQ24JP5 1023 aa6.03□□□□□ -1.44
HMGB3P8-201ENST00000449709 TMEM92Q6UXU6 159 aa6.03□□□□□ -1.44
HMGB3P8-201ENST00000449709 FAM205CA6NFA0 338 aa6.02□□□□□ -1.45
HMGB3P8-201ENST00000449709 P3H3Q8IVL6 736 aa6.02□□□□□ -1.45
HMGB3P8-201ENST00000449709 HRCP23327 699 aa6.01□□□□□ -1.45
HMGB3P8-201ENST00000449709 ERICH6Q7L0X2 663 aa6.01□□□□□ -1.45
HMGB3P8-201ENST00000449709 HS3ST6Q96QI5 342 aa6.01□□□□□ -1.45
HMGB3P8-201ENST00000449709 FBXO22Q8NEZ5 403 aa6□□□□□ -1.45
HMGB3P8-201ENST00000449709 NLRP6P59044 892 aa5.99□□□□□ -1.45
HMGB3P8-201ENST00000449709 ZNF710Q8N1W2 664 aa5.99□□□□□ -1.45
HMGB3P8-201ENST00000449709 HOXB1P14653 301 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P8-201ENST00000449709 DOK7Q18PE1 504 aa5.98□□□□□ -1.45
HMGB3P8-201ENST00000449709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB3P8-201ENST00000449709 CADPS2Q86UW7 1296 aa5.98□□□□□ -1.45
HMGB3P8-201ENST00000449709 SPNS2Q8IVW8 549 aa5.98□□□□□ -1.45
HMGB3P8-201ENST00000449709 KCNV2Q8TDN2 545 aa5.98□□□□□ -1.45
HMGB3P8-201ENST00000449709 MFRPQ9BY79 579 aa5.98□□□□□ -1.45
HMGB3P8-201ENST00000449709 KRTAP3-3Q9BYR6 98 aa5.97□□□□□ -1.45
HMGB3P8-201ENST00000449709 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
HMGB3P8-201ENST00000449709 MMRN1Q13201 1228 aa5.96□□□□□ -1.46
HMGB3P8-201ENST00000449709 LMOD2Q6P5Q4 547 aa5.96□□□□□ -1.46
HMGB3P8-201ENST00000449709 WDR70Q9NW82 654 aa5.96□□□□□ -1.46
HMGB3P8-201ENST00000449709 ERBB3P21860 1342 aa5.95□□□□□ -1.46
HMGB3P8-201ENST00000449709 RIMBP2O15034 1052 aa5.94□□□□□ -1.46
HMGB3P8-201ENST00000449709 VARS2Q5ST30 1063 aaKnown RBP5.92□□□□□ -1.46
HMGB3P8-201ENST00000449709 GPR153Q6NV75 609 aa5.92□□□□□ -1.46
HMGB3P8-201ENST00000449709 ARXQ96QS3 562 aa5.92□□□□□ -1.46
HMGB3P8-201ENST00000449709 ARSIQ5FYB1 569 aa5.91□□□□□ -1.46
HMGB3P8-201ENST00000449709 ZSWIM6Q9HCJ5 1215 aa5.91□□□□□ -1.46
HMGB3P8-201ENST00000449709 C2orf72A6NCS6 295 aa5.9□□□□□ -1.46
HMGB3P8-201ENST00000449709 PPP1R37O75864 691 aa5.9□□□□□ -1.46
HMGB3P8-201ENST00000449709 ARHGEF1Q92888 912 aaKnown RBP5.9□□□□□ -1.46
HMGB3P8-201ENST00000449709 KHSRPQ92945 711 aaKnown RBP eCLIP5.9□□□□□ -1.46
HMGB3P8-201ENST00000449709 KIF3CO14782 793 aa5.89□□□□□ -1.47
HMGB3P8-201ENST00000449709 BRPF1P55201 1214 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P8-201ENST00000449709 C14orf37Q86TY3 774 aa5.88□□□□□ -1.47
HMGB3P8-201ENST00000449709 ZC3H15Q8WU90 426 aaKnown RBP5.88□□□□□ -1.47
HMGB3P8-201ENST00000449709 E2F4Q16254 413 aa5.86□□□□□ -1.47
HMGB3P8-201ENST00000449709 TESPA1A2RU30 521 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P8-201ENST00000449709 ZNF687Q8N1G0 1237 aa5.85□□□□□ -1.47
HMGB3P8-201ENST00000449709 TMC2Q8TDI7 906 aa5.85□□□□□ -1.47
HMGB3P8-201ENST00000449709 ZNF316A6NFI3 1004 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P8-201ENST00000449709 SEMA3EO15041 775 aa5.84□□□□□ -1.47
HMGB3P8-201ENST00000449709 NUDT7P0C024 238 aa5.83□□□□□ -1.48
HMGB3P8-201ENST00000449709 SLC24A3Q9HC58 644 aa5.83□□□□□ -1.48
HMGB3P8-201ENST00000449709 PCDHGA4Q9Y5G9 962 aa5.82□□□□□ -1.48
HMGB3P8-201ENST00000449709 NEUROD2Q15784 382 aa5.81□□□□□ -1.48
HMGB3P8-201ENST00000449709 ZMYND10O75800 440 aa5.8□□□□□ -1.48
HMGB3P8-201ENST00000449709 SLC34A2O95436 690 aa5.8□□□□□ -1.48
HMGB3P8-201ENST00000449709 ANKRD13DQ6ZTN6 518 aa5.8□□□□□ -1.48
HMGB3P8-201ENST00000449709 HOMEZQ8IX15 550 aa5.8□□□□□ -1.48
HMGB3P8-201ENST00000449709 LHX6Q9UPM6 363 aa5.8□□□□□ -1.48
HMGB3P8-201ENST00000449709 NCKAP5LQ9HCH0 1330 aa5.79□□□□□ -1.48
HMGB3P8-201ENST00000449709 BCL11AQ9H165 835 aa5.79□□□□□ -1.48
HMGB3P8-201ENST00000449709 DAXXQ9UER7 740 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P8-201ENST00000449709 ARIH1Q9Y4X5 557 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P8-201ENST00000449709 PDE4AP27815 886 aa5.78□□□□□ -1.48
HMGB3P8-201ENST00000449709 MFSD10Q14728 455 aa5.78□□□□□ -1.48
HMGB3P8-201ENST00000449709 SMYD5Q6GMV2 418 aa5.78□□□□□ -1.48
HMGB3P8-201ENST00000449709 POTEEQ6S8J3 1075 aa5.78□□□□□ -1.48
HMGB3P8-201ENST00000449709 RNF166Q96A37 237 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P8-201ENST00000449709 MYT1LQ9UL68 1186 aa5.78□□□□□ -1.48
HMGB3P8-201ENST00000449709 DSG2Q14126 1118 aa5.77□□□□□ -1.49
HMGB3P8-201ENST00000449709 PLPP6Q8IY26 295 aa5.77□□□□□ -1.49
HMGB3P8-201ENST00000449709 GPHNQ9NQX3 736 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P8-201ENST00000449709 AXIN2Q9Y2T1 843 aa5.77□□□□□ -1.49
HMGB3P8-201ENST00000449709 LSM11P83369 360 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB3P8-201ENST00000449709 FOXK1P85037 733 aa5.76□□□□□ -1.49
HMGB3P8-201ENST00000449709 BARGINQ6ZT62 677 aa5.76□□□□□ -1.49
HMGB3P8-201ENST00000449709 LARP6Q9BRS8 491 aaKnown RBP5.76□□□□□ -1.49
HMGB3P8-201ENST00000449709 CRISPLD2Q9H0B8 497 aa5.76□□□□□ -1.49
HMGB3P8-201ENST00000449709 KDM4FA0A1W2PPD8 638 aa5.75□□□□□ -1.49
HMGB3P8-201ENST00000449709 CAMK2BQ13554 666 aa5.75□□□□□ -1.49
HMGB3P8-201ENST00000449709 PTCD2Q8WV60 388 aaKnown RBP5.75□□□□□ -1.49
HMGB3P8-201ENST00000449709 PBX2P40425 430 aa5.73□□□□□ -1.49
HMGB3P8-201ENST00000449709 DDX27Q96GQ7 796 aaKnown RBP5.73□□□□□ -1.49
HMGB3P8-201ENST00000449709 SUPT5HO00267 1087 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms