RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 PLCB2Q00722 1185 aa22.65■■□□□ 1.22
SKIDA1-202ENST00000449193 GOLGA6L4A6NEF3 574 aa22.64■■□□□ 1.22
SKIDA1-202ENST00000449193 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.21
SKIDA1-202ENST00000449193 ISY1Q9ULR0 285 aaKnown RBP22.62■■□□□ 1.21
SKIDA1-202ENST00000449193 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
SKIDA1-202ENST00000449193 PKD2Q13563 968 aa22.61■■□□□ 1.21
SKIDA1-202ENST00000449193 ARHGAP35Q9NRY4 1499 aa22.61■■□□□ 1.21
SKIDA1-202ENST00000449193 CALD1Q05682 793 aaKnown RBP22.61■■□□□ 1.21
SKIDA1-202ENST00000449193 IPO8O15397 1037 aaKnown RBP22.58■■□□□ 1.21
SKIDA1-202ENST00000449193 CHMP4AQ9BY43 222 aa22.58■■□□□ 1.21
SKIDA1-202ENST00000449193 HSCBQ8IWL3 235 aa22.58■■□□□ 1.2
SKIDA1-202ENST00000449193 TMX4Q9H1E5 349 aaPredicted RBP22.57■■□□□ 1.2
SKIDA1-202ENST00000449193 KTN1Q86UP2 1357 aaKnown RBP22.56■■□□□ 1.2
SKIDA1-202ENST00000449193 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
SKIDA1-202ENST00000449193 CLSTN1O94985 981 aa22.54■■□□□ 1.2
SKIDA1-202ENST00000449193 SETD5Q9C0A6 1442 aa22.54■■□□□ 1.2
SKIDA1-202ENST00000449193 ZNF330Q9Y3S2 320 aaPredicted RBP22.53■■□□□ 1.2
SKIDA1-202ENST00000449193 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
SKIDA1-202ENST00000449193 CCDC9Q9Y3X0 531 aaKnown RBP22.51■■□□□ 1.19
SKIDA1-202ENST00000449193 ERICH6BQ5W0A0 696 aa22.51■■□□□ 1.19
SKIDA1-202ENST00000449193 KIAA1211Q6ZU35 1233 aa22.5■■□□□ 1.19
SKIDA1-202ENST00000449193 GNL2Q13823 731 aaKnown RBP22.5■■□□□ 1.19
SKIDA1-202ENST00000449193 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
SKIDA1-202ENST00000449193 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
SKIDA1-202ENST00000449193 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
SKIDA1-202ENST00000449193 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
SKIDA1-202ENST00000449193 SOGA1O94964 1423 aa22.49■■□□□ 1.19
SKIDA1-202ENST00000449193 ROCK2O75116 1388 aaKnown RBP22.49■■□□□ 1.19
SKIDA1-202ENST00000449193 HSPA5P11021 654 aaKnown RBP22.49■■□□□ 1.19
SKIDA1-202ENST00000449193 NUP155O75694 1391 aa22.48■■□□□ 1.19
SKIDA1-202ENST00000449193 SPAG9O60271 1321 aaKnown RBP22.47■■□□□ 1.19
SKIDA1-202ENST00000449193 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
SKIDA1-202ENST00000449193 KIF3BO15066 747 aa22.45■■□□□ 1.18
SKIDA1-202ENST00000449193 CECR2Q9BXF3 1484 aa22.45■■□□□ 1.18
SKIDA1-202ENST00000449193 TERF2IPQ9NYB0 399 aa22.44■■□□□ 1.18
SKIDA1-202ENST00000449193 CCER2I3L3R5 266 aa22.44■■□□□ 1.18
SKIDA1-202ENST00000449193 STK31Q9BXU1 1019 aa22.44■■□□□ 1.18
SKIDA1-202ENST00000449193 B4GALNT3Q6L9W6 998 aa22.43■■□□□ 1.18
SKIDA1-202ENST00000449193 HDAC5Q9UQL6 1122 aa22.43■■□□□ 1.18
SKIDA1-202ENST00000449193 APBB1O00213 710 aa22.43■■□□□ 1.18
SKIDA1-202ENST00000449193 NOP58Q9Y2X3 529 aaKnown RBP22.42■■□□□ 1.18
SKIDA1-202ENST00000449193 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
SKIDA1-202ENST00000449193 RALBP1Q15311 655 aa22.41■■□□□ 1.18
SKIDA1-202ENST00000449193 FOXD1Q16676 465 aa22.41■■□□□ 1.18
SKIDA1-202ENST00000449193 SMARCA2P51531 1590 aa22.4■■□□□ 1.18
SKIDA1-202ENST00000449193 GORABQ5T7V8 394 aa22.4■■□□□ 1.18
SKIDA1-202ENST00000449193 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
SKIDA1-202ENST00000449193 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
SKIDA1-202ENST00000449193 NGDNQ8NEJ9 315 aaKnown RBP22.4■■□□□ 1.18
SKIDA1-202ENST00000449193 TAF7LQ5H9L4 462 aa22.39■■□□□ 1.17
SKIDA1-202ENST00000449193 L1TD1Q5T7N2 865 aaKnown RBP22.39■■□□□ 1.17
SKIDA1-202ENST00000449193 WASHC2CQ9Y4E1 1318 aa22.38■■□□□ 1.17
SKIDA1-202ENST00000449193 RSPH4AQ5TD94 716 aa22.38■■□□□ 1.17
SKIDA1-202ENST00000449193 ITPRIPQ8IWB1 547 aa22.38■■□□□ 1.17
SKIDA1-202ENST00000449193 RWDD1Q9H446 243 aaPredicted RBP22.37■■□□□ 1.17
SKIDA1-202ENST00000449193 CHAF1AQ13111 956 aaPredicted RBP22.36■■□□□ 1.17
SKIDA1-202ENST00000449193 GPATCH3Q96I76 525 aa22.35■■□□□ 1.17
SKIDA1-202ENST00000449193 CHMP3Q9Y3E7 222 aa22.35■■□□□ 1.17
SKIDA1-202ENST00000449193 NAP1L5Q96NT1 182 aaPredicted RBP22.35■■□□□ 1.17
SKIDA1-202ENST00000449193 DRC7Q8IY82 874 aa22.34■■□□□ 1.17
SKIDA1-202ENST00000449193 NCBP3Q53F19 620 aaKnown RBP22.34■■□□□ 1.17
SKIDA1-202ENST00000449193 G3V3G9 751 aa22.34■■□□□ 1.17
SKIDA1-202ENST00000449193 DCAF8Q5TAQ9 597 aa22.34■■□□□ 1.17
SKIDA1-202ENST00000449193 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
SKIDA1-202ENST00000449193 AMPHP49418 695 aa22.32■■□□□ 1.16
SKIDA1-202ENST00000449193 HNRNPMP52272 730 aaKnown RBP eCLIP22.31■■□□□ 1.16
SKIDA1-202ENST00000449193 LMOD3Q0VAK6 560 aa22.31■■□□□ 1.16
SKIDA1-202ENST00000449193 HMMRO75330 724 aa22.3■■□□□ 1.16
SKIDA1-202ENST00000449193 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
SKIDA1-202ENST00000449193 KIAA2012Q0VF49 1180 aa22.29■■□□□ 1.16
SKIDA1-202ENST00000449193 SPRYD3Q8NCJ5 442 aa22.29■■□□□ 1.16
SKIDA1-202ENST00000449193 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
SKIDA1-202ENST00000449193 RCAN3Q9UKA8 241 aa22.28■■□□□ 1.16
SKIDA1-202ENST00000449193 PTMSP20962 102 aa22.26■■□□□ 1.15
SKIDA1-202ENST00000449193 SMC4Q9NTJ3 1288 aa22.26■■□□□ 1.15
SKIDA1-202ENST00000449193 PMFBP1Q8TBY8 1022 aa22.26■■□□□ 1.15
SKIDA1-202ENST00000449193 GTF2E1P29083 439 aaPredicted RBP22.25■■□□□ 1.15
SKIDA1-202ENST00000449193 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
SKIDA1-202ENST00000449193 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
SKIDA1-202ENST00000449193 MSNP26038 577 aaKnown RBP22.24■■□□□ 1.15
SKIDA1-202ENST00000449193 CCDC34Q96HJ3 373 aa22.24■■□□□ 1.15
SKIDA1-202ENST00000449193 GBP4Q96PP9 640 aa22.23■■□□□ 1.15
SKIDA1-202ENST00000449193 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
SKIDA1-202ENST00000449193 LTV1Q96GA3 475 aaPredicted RBP22.22■■□□□ 1.15
SKIDA1-202ENST00000449193 SLC4A10Q6U841 1118 aa22.21■■□□□ 1.15
SKIDA1-202ENST00000449193 TRIM6-TRIM34B2RNG4 842 aa22.2■■□□□ 1.14
SKIDA1-202ENST00000449193 JPH4Q96JJ6 628 aa22.19■■□□□ 1.14
SKIDA1-202ENST00000449193 HSP90B1P14625 803 aaKnown RBP22.19■■□□□ 1.14
SKIDA1-202ENST00000449193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
SKIDA1-202ENST00000449193 FRAT2O75474 233 aaPredicted RBP22.19■■□□□ 1.14
SKIDA1-202ENST00000449193 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
SKIDA1-202ENST00000449193 NUTM2FA1L443 756 aa22.17■■□□□ 1.14
SKIDA1-202ENST00000449193 TPM4P67936 248 aa22.16■■□□□ 1.14
SKIDA1-202ENST00000449193 SYAP1Q96A49 352 aaPredicted RBP22.16■■□□□ 1.14
SKIDA1-202ENST00000449193 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
SKIDA1-202ENST00000449193 TRAK1Q9UPV9 953 aa22.15■■□□□ 1.14
SKIDA1-202ENST00000449193 MROH2BQ7Z745 1585 aa22.15■■□□□ 1.14
SKIDA1-202ENST00000449193 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.14
SKIDA1-202ENST00000449193 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
SKIDA1-202ENST00000449193 NLRP13Q86W25 1043 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms