RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 HECW1Q76N89 1606 aa29.95■■■□□ 2.38
CHCHD3-203ENST00000448878 MAGI2Q86UL8 1455 aa29.94■■■□□ 2.38
CHCHD3-203ENST00000448878 PLCH2O75038 1416 aa29.93■■■□□ 2.38
CHCHD3-203ENST00000448878 SIGLEC1Q9BZZ2 1709 aa29.92■■■□□ 2.38
CHCHD3-203ENST00000448878 EFCAB2Q5VUJ9 269 aa29.9■■■□□ 2.38
CHCHD3-203ENST00000448878 MYT1LQ9UL68 1186 aa29.9■■■□□ 2.38
CHCHD3-203ENST00000448878 CDK11AQ9UQ88 783 aaPredicted RBP29.89■■■□□ 2.38
CHCHD3-203ENST00000448878 FER1L4A9Z1Z3 1794 aa29.87■■■□□ 2.37
CHCHD3-203ENST00000448878 ATP10AO60312 1499 aa29.84■■■□□ 2.37
CHCHD3-203ENST00000448878 FMN1Q68DA7 1419 aa29.83■■■□□ 2.37
CHCHD3-203ENST00000448878 CERKQ8TCT0 537 aa29.82■■■□□ 2.36
CHCHD3-203ENST00000448878 CEBPAP49715 358 aaPredicted RBP29.81■■■□□ 2.36
CHCHD3-203ENST00000448878 MYO5CQ9NQX4 1742 aa29.81■■■□□ 2.36
CHCHD3-203ENST00000448878 C9orf84Q5VXU9 1444 aa29.8■■■□□ 2.36
CHCHD3-203ENST00000448878 AFAP1Q8N556 730 aa29.76■■■□□ 2.35
CHCHD3-203ENST00000448878 ARHGAP5Q13017 1502 aa29.75■■■□□ 2.35
CHCHD3-203ENST00000448878 ARHGEF12Q9NZN5 1544 aa29.74■■■□□ 2.35
CHCHD3-203ENST00000448878 KIF14Q15058 1648 aa29.74■■■□□ 2.35
CHCHD3-203ENST00000448878 ARHGAP35Q9NRY4 1499 aa29.74■■■□□ 2.35
CHCHD3-203ENST00000448878 CLIP1P30622 1438 aa29.71■■■□□ 2.35
CHCHD3-203ENST00000448878 ZNF518AQ6AHZ1 1483 aa29.71■■■□□ 2.35
CHCHD3-203ENST00000448878 TROQ12816 1431 aaPredicted RBP29.7■■■□□ 2.34
CHCHD3-203ENST00000448878 PREX1Q8TCU6 1659 aa29.68■■■□□ 2.34
CHCHD3-203ENST00000448878 ESF1Q9H501 851 aaKnown RBP29.66■■■□□ 2.34
CHCHD3-203ENST00000448878 DMRT2Q9Y5R5 561 aa29.64■■■□□ 2.34
CHCHD3-203ENST00000448878 UHRF1BP1Q6BDS2 1440 aa29.62■■■□□ 2.33
CHCHD3-203ENST00000448878 KDM5CP41229 1560 aa29.59■■■□□ 2.33
CHCHD3-203ENST00000448878 LRRIQ1Q96JM4 1722 aa29.57■■■□□ 2.32
CHCHD3-203ENST00000448878 DIP2CQ9Y2E4 1556 aa29.56■■■□□ 2.32
CHCHD3-203ENST00000448878 CDC42BPBQ9Y5S2 1711 aa29.55■■■□□ 2.32
CHCHD3-203ENST00000448878 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
CHCHD3-203ENST00000448878 TRAPPC8Q9Y2L5 1435 aa29.52■■■□□ 2.32
CHCHD3-203ENST00000448878 ABCA6Q8N139 1617 aa29.52■■■□□ 2.32
CHCHD3-203ENST00000448878 STRCQ7RTU9 1775 aa29.52■■■□□ 2.32
CHCHD3-203ENST00000448878 MLH3Q9UHC1 1453 aa29.51■■■□□ 2.31
CHCHD3-203ENST00000448878 ZNF777Q9ULD5 760 aaPredicted RBP29.5■■■□□ 2.31
CHCHD3-203ENST00000448878 SETD1BQ9UPS6 1966 aaKnown RBP29.49■■■□□ 2.31
CHCHD3-203ENST00000448878 REREQ9P2R6 1566 aa29.47■■■□□ 2.31
CHCHD3-203ENST00000448878 C3P01024 1663 aa29.47■■■□□ 2.31
CHCHD3-203ENST00000448878 PREX2Q70Z35 1606 aa29.47■■■□□ 2.31
CHCHD3-203ENST00000448878 CCDC18Q5T9S5 1454 aa29.46■■■□□ 2.31
CHCHD3-203ENST00000448878 ABCC1P33527 1531 aa29.45■■■□□ 2.31
CHCHD3-203ENST00000448878 CASKIN1Q8WXD9 1431 aa29.44■■■□□ 2.3
CHCHD3-203ENST00000448878 ITSN2Q9NZM3 1697 aa29.44■■■□□ 2.3
CHCHD3-203ENST00000448878 DISP3Q9P2K9 1392 aa29.43■■■□□ 2.3
CHCHD3-203ENST00000448878 AGLP35573 1532 aa29.42■■■□□ 2.3
CHCHD3-203ENST00000448878 PTPRTO14522 1441 aa29.38■■■□□ 2.29
CHCHD3-203ENST00000448878 KIDINS220Q9ULH0 1771 aa29.38■■■□□ 2.29
CHCHD3-203ENST00000448878 CDC42BPAQ5VT25 1732 aa29.37■■■□□ 2.29
CHCHD3-203ENST00000448878 HNRNPMP52272 730 aaKnown RBP eCLIP29.36■■■□□ 2.292e-6■■■■□ 23.8
CHCHD3-203ENST00000448878 CNTLNQ9NXG0 1405 aa29.36■■■□□ 2.29
CHCHD3-203ENST00000448878 SPAG9O60271 1321 aaKnown RBP29.34■■■□□ 2.29
CHCHD3-203ENST00000448878 ILDR2Q71H61 639 aa29.31■■■□□ 2.28
CHCHD3-203ENST00000448878 SAMD9LQ8IVG5 1584 aa29.3■■■□□ 2.28
CHCHD3-203ENST00000448878 FYCO1Q9BQS8 1478 aa29.29■■■□□ 2.28
CHCHD3-203ENST00000448878 ZMYM3Q14202 1370 aa29.28■■■□□ 2.28
CHCHD3-203ENST00000448878 SYCP2Q9BX26 1530 aa29.28■■■□□ 2.28
CHCHD3-203ENST00000448878 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
CHCHD3-203ENST00000448878 CFDP1Q9UEE9 299 aaPredicted RBP29.27■■■□□ 2.28
CHCHD3-203ENST00000448878 NCOA1Q15788 1441 aa29.27■■■□□ 2.28
CHCHD3-203ENST00000448878 GPATCH8Q9UKJ3 1502 aaKnown RBP29.25■■■□□ 2.27
CHCHD3-203ENST00000448878 NCKAP5LQ9HCH0 1330 aa29.24■■■□□ 2.27
CHCHD3-203ENST00000448878 CAMSAP1Q5T5Y3 1602 aa29.24■■■□□ 2.27
CHCHD3-203ENST00000448878 GGT6Q6P531 493 aa29.24■■■□□ 2.27
CHCHD3-203ENST00000448878 NPATQ14207 1427 aa29.22■■■□□ 2.27
CHCHD3-203ENST00000448878 LTBP4Q8N2S1 1624 aa29.22■■■□□ 2.27
CHCHD3-203ENST00000448878 CCNB3Q8WWL7 1395 aa29.21■■■□□ 2.27
CHCHD3-203ENST00000448878 MROH2AA6NES4 1674 aa29.21■■■□□ 2.27
CHCHD3-203ENST00000448878 ATP7AQ04656 1500 aa29.19■■■□□ 2.26
CHCHD3-203ENST00000448878 SOCS7O14512 581 aa29.18■■■□□ 2.26
CHCHD3-203ENST00000448878 CLTCQ00610 1675 aaKnown RBP29.18■■■□□ 2.26
CHCHD3-203ENST00000448878 A2MP01023 1474 aa29.17■■■□□ 2.26
CHCHD3-203ENST00000448878 PLEKHH2Q8IVE3 1493 aa29.16■■■□□ 2.26
CHCHD3-203ENST00000448878 MTUS2Q5JR59 1369 aa29.15■■■□□ 2.26
CHCHD3-203ENST00000448878 KIAA1107Q9UPP5 1409 aa29.14■■■□□ 2.26
CHCHD3-203ENST00000448878 ZNF335Q9H4Z2 1342 aaPredicted RBP29.14■■■□□ 2.25
CHCHD3-203ENST00000448878 SPATA31D1Q6ZQQ2 1576 aa29.13■■■□□ 2.25
CHCHD3-203ENST00000448878 IQSEC2Q5JU85 1478 aa29.13■■■□□ 2.25
CHCHD3-203ENST00000448878 UBAP1LF5GYI3 381 aa29.12■■■□□ 2.25
CHCHD3-203ENST00000448878 PKD2Q13563 968 aa29.1■■■□□ 2.25
CHCHD3-203ENST00000448878 INO80Q9ULG1 1556 aaPredicted RBP29.09■■■□□ 2.25
CHCHD3-203ENST00000448878 ZNF644Q9H582 1327 aaPredicted RBP29.08■■■□□ 2.25
CHCHD3-203ENST00000448878 MYO3AQ8NEV4 1616 aa29.08■■■□□ 2.25
CHCHD3-203ENST00000448878 PLXNC1O60486 1568 aa29.07■■■□□ 2.24
CHCHD3-203ENST00000448878 PTPRKQ15262 1439 aa29.07■■■□□ 2.24
CHCHD3-203ENST00000448878 CEP170BQ9Y4F5 1589 aaPredicted RBP29.04■■■□□ 2.24
CHCHD3-203ENST00000448878 PPP6R1Q9UPN7 881 aa29.03■■■□□ 2.24
CHCHD3-203ENST00000448878 PLA2R1Q13018 1463 aa29.02■■■□□ 2.24
CHCHD3-203ENST00000448878 ZNF142P52746 1687 aaPredicted RBP29.02■■■□□ 2.24
CHCHD3-203ENST00000448878 ADGBQ8N7X0 1667 aa29.02■■■□□ 2.24
CHCHD3-203ENST00000448878 TCOF1Q13428 1488 aaKnown RBP28.97■■■□□ 2.23
CHCHD3-203ENST00000448878 SCAF1Q9H7N4 1312 aaKnown RBP28.96■■■□□ 2.23
CHCHD3-203ENST00000448878 KIF3BO15066 747 aa28.96■■■□□ 2.23
CHCHD3-203ENST00000448878 TIAM1Q13009 1591 aa28.96■■■□□ 2.23
CHCHD3-203ENST00000448878 DHX29Q7Z478 1369 aaKnown RBP28.93■■■□□ 2.22
CHCHD3-203ENST00000448878 A2ML1A8K2U0 1454 aa28.92■■■□□ 2.22
CHCHD3-203ENST00000448878 MBD5Q9P267 1494 aa28.92■■■□□ 2.22
CHCHD3-203ENST00000448878 FBXO31Q5XUX0 539 aaPredicted RBP28.92■■■□□ 2.22
CHCHD3-203ENST00000448878 EHBP1L1Q8N3D4 1523 aa28.92■■■□□ 2.22
CHCHD3-203ENST00000448878 RTEL1-TNFRSF6BF6WH68 1400 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms