RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 ABCA8O94911 1581 aa24.49■■□□□ 1.51
CDKN1A-204ENST00000448526 ADCY10Q96PN6 1610 aa24.49■■□□□ 1.51
CDKN1A-204ENST00000448526 TRIM52Q96A61 297 aa24.49■■□□□ 1.51
CDKN1A-204ENST00000448526 ROCK1Q13464 1354 aa24.48■■□□□ 1.51
CDKN1A-204ENST00000448526 KDM5BQ9UGL1 1544 aa24.48■■□□□ 1.51
CDKN1A-204ENST00000448526 GPATCH8Q9UKJ3 1502 aaKnown RBP24.47■■□□□ 1.51
CDKN1A-204ENST00000448526 HIRIP3Q9BW71 556 aaPredicted RBP24.45■■□□□ 1.5
CDKN1A-204ENST00000448526 ITSN2Q9NZM3 1697 aa24.44■■□□□ 1.5
CDKN1A-204ENST00000448526 CAMSAP2Q08AD1 1489 aa24.44■■□□□ 1.5
CDKN1A-204ENST00000448526 MPHOSPH9Q99550 1183 aa24.43■■□□□ 1.5
CDKN1A-204ENST00000448526 CFDP1Q9UEE9 299 aaPredicted RBP24.42■■□□□ 1.5
CDKN1A-204ENST00000448526 ATP10BO94823 1461 aa24.42■■□□□ 1.5
CDKN1A-204ENST00000448526 DDX10Q13206 875 aaKnown RBP24.4■■□□□ 1.5
CDKN1A-204ENST00000448526 CHD1O14646 1710 aa24.4■■□□□ 1.5
CDKN1A-204ENST00000448526 FOXD1Q16676 465 aa24.37■■□□□ 1.49
CDKN1A-204ENST00000448526 ZNF777Q9ULD5 760 aaPredicted RBP24.35■■□□□ 1.49
CDKN1A-204ENST00000448526 PLEKHD1A6NEE1 506 aa24.35■■□□□ 1.49
CDKN1A-204ENST00000448526 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
CDKN1A-204ENST00000448526 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
CDKN1A-204ENST00000448526 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
CDKN1A-204ENST00000448526 PTPRGP23470 1445 aa24.32■■□□□ 1.48
CDKN1A-204ENST00000448526 ADGBQ8N7X0 1667 aa24.32■■□□□ 1.48
CDKN1A-204ENST00000448526 NCOA1Q15788 1441 aa24.32■■□□□ 1.48
CDKN1A-204ENST00000448526 KCNH8Q96L42 1107 aa24.29■■□□□ 1.48
CDKN1A-204ENST00000448526 ANKRD30BQ9BXX2 1392 aa24.29■■□□□ 1.48
CDKN1A-204ENST00000448526 ADGRL2O95490 1459 aa24.28■■□□□ 1.48
CDKN1A-204ENST00000448526 SHROOM2Q13796 1616 aa24.26■■□□□ 1.47
CDKN1A-204ENST00000448526 PZPP20742 1482 aa24.24■■□□□ 1.47
CDKN1A-204ENST00000448526 L3MBTL2Q969R5 705 aa24.23■■□□□ 1.47
CDKN1A-204ENST00000448526 SLC4A1APQ9BWU0 796 aaKnown RBP24.23■■□□□ 1.47
CDKN1A-204ENST00000448526 RPRD2Q5VT52 1461 aaKnown RBP24.22■■□□□ 1.47
CDKN1A-204ENST00000448526 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.47
CDKN1A-204ENST00000448526 ANKRD30AQ9BXX3 1397 aa24.2■■□□□ 1.46
CDKN1A-204ENST00000448526 TEX14Q8IWB6 1497 aa24.16■■□□□ 1.46
CDKN1A-204ENST00000448526 SHANK2Q9UPX8 1470 aa24.16■■□□□ 1.46
CDKN1A-204ENST00000448526 C9orf84Q5VXU9 1444 aa24.15■■□□□ 1.46
CDKN1A-204ENST00000448526 HSPA5P11021 654 aaKnown RBP24.15■■□□□ 1.46
CDKN1A-204ENST00000448526 CDC42BPBQ9Y5S2 1711 aa24.14■■□□□ 1.45
CDKN1A-204ENST00000448526 ANKRD50Q9ULJ7 1429 aa24.14■■□□□ 1.45
CDKN1A-204ENST00000448526 HNRNPMP52272 730 aaKnown RBP eCLIP24.12■■□□□ 1.45
CDKN1A-204ENST00000448526 MBD5Q9P267 1494 aa24.11■■□□□ 1.45
CDKN1A-204ENST00000448526 PREX2Q70Z35 1606 aa24.11■■□□□ 1.45
CDKN1A-204ENST00000448526 NBPF8Q3BBV2 869 aa24.11■■□□□ 1.45
CDKN1A-204ENST00000448526 SAMD9LQ8IVG5 1584 aa24.11■■□□□ 1.45
CDKN1A-204ENST00000448526 ARHGEF5Q12774 1597 aa24.1■■□□□ 1.45
CDKN1A-204ENST00000448526 KIAA1107Q9UPP5 1409 aa24.09■■□□□ 1.45
CDKN1A-204ENST00000448526 ANP32CO43423 234 aa24.08■■□□□ 1.45
CDKN1A-204ENST00000448526 ABCC2Q92887 1545 aa24.07■■□□□ 1.44
CDKN1A-204ENST00000448526 TSPY4P0CV99 314 aa24.07■■□□□ 1.44
CDKN1A-204ENST00000448526 TSPY10P0CW01 314 aa24.07■■□□□ 1.44
CDKN1A-204ENST00000448526 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.441e-7■■■□□ 17.9
CDKN1A-204ENST00000448526 WASHC2AQ641Q2 1341 aa24.06■■□□□ 1.44
CDKN1A-204ENST00000448526 TTC37Q6PGP7 1564 aa24.06■■□□□ 1.44
CDKN1A-204ENST00000448526 PKD2Q13563 968 aa24.06■■□□□ 1.44
CDKN1A-204ENST00000448526 CLASP1Q7Z460 1538 aa24.04■■□□□ 1.44
CDKN1A-204ENST00000448526 CCER2I3L3R5 266 aa24.04■■□□□ 1.44
CDKN1A-204ENST00000448526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.03■■□□□ 1.44
CDKN1A-204ENST00000448526 KIF15Q9NS87 1388 aa24.02■■□□□ 1.44
CDKN1A-204ENST00000448526 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
CDKN1A-204ENST00000448526 NUP155O75694 1391 aa24.01■■□□□ 1.43
CDKN1A-204ENST00000448526 KDM5DQ9BY66 1539 aa23.99■■□□□ 1.43
CDKN1A-204ENST00000448526 C11orf95C9JLR9 678 aaPredicted RBP23.98■■□□□ 1.43
CDKN1A-204ENST00000448526 SYCP2Q9BX26 1530 aa23.98■■□□□ 1.43
CDKN1A-204ENST00000448526 ARHGAP5Q13017 1502 aa23.97■■□□□ 1.43
CDKN1A-204ENST00000448526 SPATA31E1Q6ZUB1 1445 aa23.95■■□□□ 1.42
CDKN1A-204ENST00000448526 MYO5CQ9NQX4 1742 aa23.94■■□□□ 1.42
CDKN1A-204ENST00000448526 ZCCHC11Q5TAX3 1644 aaKnown RBP23.94■■□□□ 1.42
CDKN1A-204ENST00000448526 RSPH4AQ5TD94 716 aa23.93■■□□□ 1.42
CDKN1A-204ENST00000448526 CCDC7Q96M83 1385 aa23.91■■□□□ 1.42
CDKN1A-204ENST00000448526 MAST1Q9Y2H9 1570 aa23.9■■□□□ 1.42
CDKN1A-204ENST00000448526 UHRF1BP1LA0JNW5 1464 aa23.9■■□□□ 1.42
CDKN1A-204ENST00000448526 CNTLNQ9NXG0 1405 aa23.88■■□□□ 1.41
CDKN1A-204ENST00000448526 ARHGEF12Q9NZN5 1544 aa23.87■■□□□ 1.41
CDKN1A-204ENST00000448526 FAM135AQ9P2D6 1515 aa23.85■■□□□ 1.41
CDKN1A-204ENST00000448526 POLR1AO95602 1720 aaPredicted RBP23.85■■□□□ 1.41
CDKN1A-204ENST00000448526 SUPT16HQ9Y5B9 1047 aaKnown RBP23.84■■□□□ 1.41
CDKN1A-204ENST00000448526 ZNF326Q5BKZ1 582 aaKnown RBP23.84■■□□□ 1.41
CDKN1A-204ENST00000448526 PLCH2O75038 1416 aa23.83■■□□□ 1.41
CDKN1A-204ENST00000448526 PLEKHH2Q8IVE3 1493 aa23.83■■□□□ 1.4
CDKN1A-204ENST00000448526 KIF7Q2M1P5 1343 aa23.82■■□□□ 1.4
CDKN1A-204ENST00000448526 PLXNC1O60486 1568 aa23.81■■□□□ 1.4
CDKN1A-204ENST00000448526 UHRF1BP1Q6BDS2 1440 aa23.81■■□□□ 1.4
CDKN1A-204ENST00000448526 UNC13BO14795 1591 aa23.8■■□□□ 1.4
CDKN1A-204ENST00000448526 BCORL1Q5H9F3 1711 aa23.78■■□□□ 1.4
CDKN1A-204ENST00000448526 USP47Q96K76 1375 aa23.77■■□□□ 1.4
CDKN1A-204ENST00000448526 KDM5CP41229 1560 aa23.77■■□□□ 1.4
CDKN1A-204ENST00000448526 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
CDKN1A-204ENST00000448526 EFCAB2Q5VUJ9 269 aa23.75■■□□□ 1.39
CDKN1A-204ENST00000448526 RALGAPBQ86X10 1494 aa23.75■■□□□ 1.39
CDKN1A-204ENST00000448526 ABCC1P33527 1531 aa23.75■■□□□ 1.39
CDKN1A-204ENST00000448526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.73■■□□□ 1.392e-7■□□□□ 8
CDKN1A-204ENST00000448526 DUOX2Q9NRD8 1548 aa23.73■■□□□ 1.39
CDKN1A-204ENST00000448526 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
CDKN1A-204ENST00000448526 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
CDKN1A-204ENST00000448526 CCDC184Q52MB2 194 aa23.72■■□□□ 1.39
CDKN1A-204ENST00000448526 PLA2R1Q13018 1463 aa23.72■■□□□ 1.39
CDKN1A-204ENST00000448526 IQGAP3Q86VI3 1631 aa23.71■■□□□ 1.39
CDKN1A-204ENST00000448526 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
CDKN1A-204ENST00000448526 DCAF11Q8TEB1 546 aa23.7■■□□□ 1.38
CDKN1A-204ENST00000448526 MAGI2Q86UL8 1455 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms