RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-205ENST00000445329 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
TRIM6-205ENST00000445329 PRDM10Q9NQV6 1147 aa9.14□□□□□ -0.95
TRIM6-205ENST00000445329 AQRO60306 1485 aaKnown RBP eCLIP9.14□□□□□ -0.959e-8■■□□□ 11.9
TRIM6-205ENST00000445329 CHRM1P11229 460 aaPredicted RBP9.13□□□□□ -0.95
TRIM6-205ENST00000445329 KIF27Q86VH2 1401 aa9.13□□□□□ -0.95
TRIM6-205ENST00000445329 ZNF830Q96NB3 372 aaPredicted RBP9.12□□□□□ -0.95
TRIM6-205ENST00000445329 WWC1Q8IX03 1113 aa9.12□□□□□ -0.95
TRIM6-205ENST00000445329 ABCA5Q8WWZ7 1642 aa9.12□□□□□ -0.95
TRIM6-205ENST00000445329 PPM1GO15355 546 aaPredicted RBP9.12□□□□□ -0.95
TRIM6-205ENST00000445329 NCLP19338 710 aaKnown RBP9.12□□□□□ -0.95
TRIM6-205ENST00000445329 GSE1Q14687 1217 aa9.12□□□□□ -0.95
TRIM6-205ENST00000445329 VGLL3A8MV65 326 aa9.11□□□□□ -0.95
TRIM6-205ENST00000445329 ANP32AP39687 249 aaKnown RBP9.11□□□□□ -0.95
TRIM6-205ENST00000445329 KCNG1Q9UIX4 513 aa9.11□□□□□ -0.95
TRIM6-205ENST00000445329 IPO9Q96P70 1041 aaKnown RBP9.11□□□□□ -0.95
TRIM6-205ENST00000445329 IGF1RP08069 1367 aa9.1□□□□□ -0.95
TRIM6-205ENST00000445329 RNF216Q9NWF9 866 aaPredicted RBP9.1□□□□□ -0.95
TRIM6-205ENST00000445329 GAPVD1Q14C86 1478 aa9.1□□□□□ -0.95
TRIM6-205ENST00000445329 LAS1LQ9Y4W2 734 aaKnown RBP9.09□□□□□ -0.95
TRIM6-205ENST00000445329 EIF4G3O43432 1585 aaKnown RBP9.09□□□□□ -0.95
TRIM6-205ENST00000445329 EEA1Q15075 1411 aa9.09□□□□□ -0.95
TRIM6-205ENST00000445329 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
TRIM6-205ENST00000445329 ARID4BQ4LE39 1312 aaPredicted RBP9.08□□□□□ -0.96
TRIM6-205ENST00000445329 PBRM1Q86U86 1689 aa9.08□□□□□ -0.96
TRIM6-205ENST00000445329 CENPJQ9HC77 1338 aaPredicted RBP9.06□□□□□ -0.96
TRIM6-205ENST00000445329 RRAGDQ9NQL2 400 aaPredicted RBP9.06□□□□□ -0.96
TRIM6-205ENST00000445329 ZHX1Q9UKY1 873 aaPredicted RBP9.06□□□□□ -0.96
TRIM6-205ENST00000445329 PNNQ9H307 717 aaKnown RBP9.06□□□□□ -0.96
TRIM6-205ENST00000445329 PDCL3Q9H2J4 239 aa9.05□□□□□ -0.96
TRIM6-205ENST00000445329 PRXQ9BXM0 1461 aa9.05□□□□□ -0.96
TRIM6-205ENST00000445329 ERICH3Q5RHP9 1530 aa9.04□□□□□ -0.96
TRIM6-205ENST00000445329 GRIN2BQ13224 1484 aa9.04□□□□□ -0.96
TRIM6-205ENST00000445329 RAPGEF2Q9Y4G8 1499 aa9.04□□□□□ -0.96
TRIM6-205ENST00000445329 FRAT1Q92837 279 aaPredicted RBP9.04□□□□□ -0.96
TRIM6-205ENST00000445329 TMEM51Q9NW97 253 aa9.04□□□□□ -0.96
TRIM6-205ENST00000445329 CARMIL1Q5VZK9 1371 aa9.04□□□□□ -0.96
TRIM6-205ENST00000445329 KCNH8Q96L42 1107 aa9.03□□□□□ -0.96
TRIM6-205ENST00000445329 SNAPC4Q5SXM2 1469 aa9.03□□□□□ -0.96
TRIM6-205ENST00000445329 KIF21BO75037 1637 aa9.02□□□□□ -0.97
TRIM6-205ENST00000445329 CCDC9Q9Y3X0 531 aaKnown RBP9.02□□□□□ -0.97
TRIM6-205ENST00000445329 MAPK8IP2Q13387 824 aaPredicted RBP9.02□□□□□ -0.97
TRIM6-205ENST00000445329 TMED8Q6PL24 325 aaPredicted RBP9.02□□□□□ -0.97
TRIM6-205ENST00000445329 CUL7Q14999 1698 aa9.01□□□□□ -0.97
TRIM6-205ENST00000445329 KCNA4P22459 653 aa9.01□□□□□ -0.97
TRIM6-205ENST00000445329 DCAF11Q8TEB1 546 aa9.01□□□□□ -0.97
TRIM6-205ENST00000445329 ADAMTS12P58397 1594 aa9.01□□□□□ -0.97
TRIM6-205ENST00000445329 RGS22Q8NE09 1264 aa9□□□□□ -0.97
TRIM6-205ENST00000445329 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
TRIM6-205ENST00000445329 IGSF3O75054 1194 aa9□□□□□ -0.97
TRIM6-205ENST00000445329 DDRGK1Q96HY6 314 aa9□□□□□ -0.97
TRIM6-205ENST00000445329 GOLGA3Q08378 1498 aa8.99□□□□□ -0.97
TRIM6-205ENST00000445329 IRX3P78415 501 aaPredicted RBP8.99□□□□□ -0.97
TRIM6-205ENST00000445329 FHAD1B1AJZ9 1412 aa8.98□□□□□ -0.97
TRIM6-205ENST00000445329 MAGI1Q96QZ7 1491 aaPredicted RBP8.98□□□□□ -0.97
TRIM6-205ENST00000445329 UBTFP17480 764 aaKnown RBP8.98□□□□□ -0.97
TRIM6-205ENST00000445329 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.98□□□□□ -0.97
TRIM6-205ENST00000445329 SENP3Q9H4L4 574 aaPredicted RBP8.97□□□□□ -0.97
TRIM6-205ENST00000445329 FAM193AP78312 1265 aa8.97□□□□□ -0.97
TRIM6-205ENST00000445329 FBLN2P98095 1184 aa8.97□□□□□ -0.97
TRIM6-205ENST00000445329 ANP32BQ92688 251 aaKnown RBP8.97□□□□□ -0.97
TRIM6-205ENST00000445329 PPP6R1Q9UPN7 881 aa8.97□□□□□ -0.97
TRIM6-205ENST00000445329 SYNJ2O15056 1496 aa8.95□□□□□ -0.98
TRIM6-205ENST00000445329 E9PSI1 815 aa8.95□□□□□ -0.98
TRIM6-205ENST00000445329 TICAM2Q86XR7 235 aa8.95□□□□□ -0.98
TRIM6-205ENST00000445329 SMAP1Q8IYB5 467 aaPredicted RBP8.95□□□□□ -0.98
TRIM6-205ENST00000445329 CHMP7Q8WUX9 453 aaPredicted RBP8.95□□□□□ -0.98
TRIM6-205ENST00000445329 CHD1O14646 1710 aa8.95□□□□□ -0.98
TRIM6-205ENST00000445329 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
TRIM6-205ENST00000445329 GRIN2AQ12879 1464 aa8.94□□□□□ -0.98
TRIM6-205ENST00000445329 TNIKQ9UKE5 1360 aa8.94□□□□□ -0.98
TRIM6-205ENST00000445329 FAM43BQ6ZT52 329 aaPredicted RBP8.94□□□□□ -0.98
TRIM6-205ENST00000445329 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
TRIM6-205ENST00000445329 HDAC5Q9UQL6 1122 aa8.93□□□□□ -0.98
TRIM6-205ENST00000445329 MYCNP04198 464 aaPredicted RBP8.92□□□□□ -0.98
TRIM6-205ENST00000445329 APPP05067 770 aa8.92□□□□□ -0.98
TRIM6-205ENST00000445329 TRIM52Q96A61 297 aa8.92□□□□□ -0.98
TRIM6-205ENST00000445329 CEP170Q5SW79 1584 aa8.92□□□□□ -0.98
TRIM6-205ENST00000445329 SLC52A1Q9NWF4 448 aa8.91□□□□□ -0.98
TRIM6-205ENST00000445329 PPP4R2Q9NY27 417 aa8.91□□□□□ -0.98
TRIM6-205ENST00000445329 CLCN1P35523 988 aa8.91□□□□□ -0.98
TRIM6-205ENST00000445329 CTTNBP2Q8WZ74 1663 aa8.91□□□□□ -0.98
TRIM6-205ENST00000445329 SOX12O15370 315 aa8.9□□□□□ -0.98
TRIM6-205ENST00000445329 DNTTIP2Q5QJE6 756 aaKnown RBP8.9□□□□□ -0.98
TRIM6-205ENST00000445329 CLGNO14967 610 aa8.9□□□□□ -0.99
TRIM6-205ENST00000445329 PTMAP06454 111 aaKnown RBP8.9□□□□□ -0.99
TRIM6-205ENST00000445329 TPM2P07951 284 aa8.9□□□□□ -0.99
TRIM6-205ENST00000445329 NUP160Q12769 1436 aa8.89□□□□□ -0.99
TRIM6-205ENST00000445329 TMEM132AQ24JP5 1023 aa8.89□□□□□ -0.99
TRIM6-205ENST00000445329 CEP162Q5TB80 1403 aa8.89□□□□□ -0.99
TRIM6-205ENST00000445329 B4GALNT3Q6L9W6 998 aa8.89□□□□□ -0.99
TRIM6-205ENST00000445329 NFKBIBQ15653 356 aa8.88□□□□□ -0.99
TRIM6-205ENST00000445329 TNNT2P45379 298 aaPredicted RBP8.88□□□□□ -0.99
TRIM6-205ENST00000445329 GRIPAP1Q4V328 841 aa8.88□□□□□ -0.99
TRIM6-205ENST00000445329 CERS3Q8IU89 383 aa8.88□□□□□ -0.99
TRIM6-205ENST00000445329 VGFO15240 615 aaPredicted RBP8.88□□□□□ -0.99
TRIM6-205ENST00000445329 P3H3Q8IVL6 736 aa8.87□□□□□ -0.99
TRIM6-205ENST00000445329 PLCD4Q9BRC7 762 aa8.87□□□□□ -0.99
TRIM6-205ENST00000445329 UTP14CQ5TAP6 766 aaKnown RBP8.87□□□□□ -0.99
TRIM6-205ENST00000445329 AEBP1Q8IUX7 1158 aa8.87□□□□□ -0.99
TRIM6-205ENST00000445329 DMTNQ08495 405 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms