RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ARHGAP35Q9NRY4 1499 aa23.74■■□□□ 1.39
SHANK3-203ENST00000445220 KIAA2012Q0VF49 1180 aa23.74■■□□□ 1.39
SHANK3-203ENST00000445220 GZF1Q9H116 711 aaPredicted RBP23.72■■□□□ 1.39
SHANK3-203ENST00000445220 GOLGA6L4A6NEF3 574 aa23.71■■□□□ 1.39
SHANK3-203ENST00000445220 NUDCQ9Y266 331 aa23.71■■□□□ 1.39
SHANK3-203ENST00000445220 MAPK8IP3Q9UPT6 1336 aa23.69■■□□□ 1.38
SHANK3-203ENST00000445220 SLKQ9H2G2 1235 aaPredicted RBP23.69■■□□□ 1.38
SHANK3-203ENST00000445220 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
SHANK3-203ENST00000445220 ARID3AQ99856 593 aa23.68■■□□□ 1.38
SHANK3-203ENST00000445220 C14orf37Q86TY3 774 aa23.68■■□□□ 1.38
SHANK3-203ENST00000445220 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
SHANK3-203ENST00000445220 CFAP44Q96MT7 982 aa23.68■■□□□ 1.38
SHANK3-203ENST00000445220 KANK1Q14678 1352 aa23.68■■□□□ 1.38
SHANK3-203ENST00000445220 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
SHANK3-203ENST00000445220 DRC7Q8IY82 874 aa23.66■■□□□ 1.38
SHANK3-203ENST00000445220 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
SHANK3-203ENST00000445220 VSIG10Q8N0Z9 540 aa23.66■■□□□ 1.38
SHANK3-203ENST00000445220 TNNT3P45378 269 aaPredicted RBP23.65■■□□□ 1.38
SHANK3-203ENST00000445220 TMF1P82094 1093 aa23.65■■□□□ 1.38
SHANK3-203ENST00000445220 CARMIL2Q6F5E8 1435 aa23.63■■□□□ 1.37
SHANK3-203ENST00000445220 RCAN3Q9UKA8 241 aa23.63■■□□□ 1.37
SHANK3-203ENST00000445220 CC2D1BQ5T0F9 858 aaKnown RBP23.62■■□□□ 1.37
SHANK3-203ENST00000445220 POGKQ9P215 609 aa23.62■■□□□ 1.37
SHANK3-203ENST00000445220 MLECQ14165 292 aa23.6■■□□□ 1.37
SHANK3-203ENST00000445220 DCAF11Q8TEB1 546 aa23.6■■□□□ 1.37
SHANK3-203ENST00000445220 MCCP23508 829 aa23.59■■□□□ 1.37
SHANK3-203ENST00000445220 FANCIQ9NVI1 1328 aa23.59■■□□□ 1.37
SHANK3-203ENST00000445220 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
SHANK3-203ENST00000445220 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
SHANK3-203ENST00000445220 ZBTB7CA1YPR0 619 aa23.57■■□□□ 1.36
SHANK3-203ENST00000445220 KANK4Q5T7N3 995 aaPredicted RBP23.57■■□□□ 1.36
SHANK3-203ENST00000445220 GSE1Q14687 1217 aa23.56■■□□□ 1.36
SHANK3-203ENST00000445220 FGD1P98174 961 aa23.55■■□□□ 1.36
SHANK3-203ENST00000445220 SYAP1Q96A49 352 aaPredicted RBP23.55■■□□□ 1.36
SHANK3-203ENST00000445220 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
SHANK3-203ENST00000445220 KCNJ4P48050 445 aa23.54■■□□□ 1.36
SHANK3-203ENST00000445220 RAB3GAP2Q9H2M9 1393 aa23.49■■□□□ 1.35
SHANK3-203ENST00000445220 WIZO95785 1651 aa23.49■■□□□ 1.35
SHANK3-203ENST00000445220 PKD2Q13563 968 aa23.48■■□□□ 1.35
SHANK3-203ENST00000445220 RWDD1Q9H446 243 aaPredicted RBP23.48■■□□□ 1.35
SHANK3-203ENST00000445220 HDGFP51858 240 aaKnown RBP23.48■■□□□ 1.35
SHANK3-203ENST00000445220 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
SHANK3-203ENST00000445220 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
SHANK3-203ENST00000445220 CALD1Q05682 793 aaKnown RBP23.46■■□□□ 1.35
SHANK3-203ENST00000445220 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
SHANK3-203ENST00000445220 OS9Q13438 667 aaPredicted RBP23.44■■□□□ 1.34
SHANK3-203ENST00000445220 KTN1Q86UP2 1357 aaKnown RBP23.42■■□□□ 1.34
SHANK3-203ENST00000445220 MPHOSPH9Q99550 1183 aa23.42■■□□□ 1.34
SHANK3-203ENST00000445220 A0A0G2JS52 829 aa23.41■■□□□ 1.34
SHANK3-203ENST00000445220 U2SURPO15042 1029 aaKnown RBP23.41■■□□□ 1.34
SHANK3-203ENST00000445220 DDX11L8A8MPP1 907 aa23.41■■□□□ 1.34
SHANK3-203ENST00000445220 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
SHANK3-203ENST00000445220 HAP1P54257 671 aaPredicted RBP23.4■■□□□ 1.34
SHANK3-203ENST00000445220 EFCAB2Q5VUJ9 269 aa23.4■■□□□ 1.34
SHANK3-203ENST00000445220 NAP1L2Q9ULW6 460 aaPredicted RBP23.4■■□□□ 1.34
SHANK3-203ENST00000445220 RALBP1Q15311 655 aa23.39■■□□□ 1.33
SHANK3-203ENST00000445220 PLEKHG5O94827 1062 aa23.38■■□□□ 1.33
SHANK3-203ENST00000445220 IPO8O15397 1037 aaKnown RBP23.38■■□□□ 1.33
SHANK3-203ENST00000445220 MFAP1P55081 439 aaKnown RBP23.38■■□□□ 1.33
SHANK3-203ENST00000445220 PDE4AP27815 886 aa23.37■■□□□ 1.33
SHANK3-203ENST00000445220 NUP155O75694 1391 aa23.36■■□□□ 1.33
SHANK3-203ENST00000445220 MORC1Q86VD1 984 aa23.36■■□□□ 1.33
SHANK3-203ENST00000445220 PDE3BQ13370 1112 aa23.35■■□□□ 1.33
SHANK3-203ENST00000445220 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
SHANK3-203ENST00000445220 TAOK2Q9UL54 1235 aa23.35■■□□□ 1.33
SHANK3-203ENST00000445220 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.33
SHANK3-203ENST00000445220 SRPK2P78362 688 aaKnown RBP23.33■■□□□ 1.33
SHANK3-203ENST00000445220 CCDC18Q5T9S5 1454 aa23.32■■□□□ 1.32
SHANK3-203ENST00000445220 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
SHANK3-203ENST00000445220 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
SHANK3-203ENST00000445220 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
SHANK3-203ENST00000445220 GOLGA6L1Q8N7Z2 621 aa23.3■■□□□ 1.32
SHANK3-203ENST00000445220 PHF14O94880 888 aa23.29■■□□□ 1.32
SHANK3-203ENST00000445220 FHOD3Q2V2M9 1422 aa23.29■■□□□ 1.32
SHANK3-203ENST00000445220 KIAA1211Q6ZU35 1233 aa23.29■■□□□ 1.32
SHANK3-203ENST00000445220 SKOR2Q2VWA4 1001 aaPredicted RBP23.29■■□□□ 1.32
SHANK3-203ENST00000445220 FAM161AQ3B820 660 aa23.28■■□□□ 1.32
SHANK3-203ENST00000445220 FOXD1Q16676 465 aa23.28■■□□□ 1.32
SHANK3-203ENST00000445220 GGT6Q6P531 493 aa23.27■■□□□ 1.32
SHANK3-203ENST00000445220 ITPRIPQ8IWB1 547 aa23.26■■□□□ 1.31
SHANK3-203ENST00000445220 CSPP1Q1MSJ5 1256 aa23.26■■□□□ 1.31
SHANK3-203ENST00000445220 TPM4P67936 248 aa23.25■■□□□ 1.31
SHANK3-203ENST00000445220 HDGFL2Q7Z4V5 671 aaPredicted RBP23.25■■□□□ 1.31
SHANK3-203ENST00000445220 JPH4Q96JJ6 628 aa23.25■■□□□ 1.31
SHANK3-203ENST00000445220 EIF3AQ14152 1382 aaKnown RBP23.25■■□□□ 1.31
SHANK3-203ENST00000445220 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
SHANK3-203ENST00000445220 SLC4A3P48751 1232 aa23.24■■□□□ 1.31
SHANK3-203ENST00000445220 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
SHANK3-203ENST00000445220 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
SHANK3-203ENST00000445220 CENPQQ7L2Z9 268 aaPredicted RBP23.23■■□□□ 1.31
SHANK3-203ENST00000445220 GOLGA2Q08379 1002 aa23.22■■□□□ 1.31
SHANK3-203ENST00000445220 DDX49Q9Y6V7 483 aaKnown RBP23.2■■□□□ 1.31
SHANK3-203ENST00000445220 TULP1O00294 542 aaPredicted RBP23.2■■□□□ 1.3
SHANK3-203ENST00000445220 APBB1O00213 710 aa23.19■■□□□ 1.3
SHANK3-203ENST00000445220 L3MBTL2Q969R5 705 aa23.19■■□□□ 1.3
SHANK3-203ENST00000445220 FOXD4L1Q9NU39 408 aa23.19■■□□□ 1.3
SHANK3-203ENST00000445220 ZNF771Q7L3S4 317 aaPredicted RBP23.18■■□□□ 1.3
SHANK3-203ENST00000445220 GNL2Q13823 731 aaKnown RBP23.17■■□□□ 1.3
SHANK3-203ENST00000445220 FAM13BQ9NYF5 915 aa23.17■■□□□ 1.3
SHANK3-203ENST00000445220 NLRP13Q86W25 1043 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms