RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
LINC01004-201ENST00000445184 ZNF316A6NFI3 1004 aaPredicted RBP12.24□□□□□ -0.45
LINC01004-201ENST00000445184 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
LINC01004-201ENST00000445184 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC01004-201ENST00000445184 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
LINC01004-201ENST00000445184 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■■□□ 17.7
LINC01004-201ENST00000445184 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
LINC01004-201ENST00000445184 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
LINC01004-201ENST00000445184 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
LINC01004-201ENST00000445184 VGFO15240 615 aaPredicted RBP12.14□□□□□ -0.47
LINC01004-201ENST00000445184 PBX2P40425 430 aa12.13□□□□□ -0.47
LINC01004-201ENST00000445184 NLRP6P59044 892 aa12.1□□□□□ -0.47
LINC01004-201ENST00000445184 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
LINC01004-201ENST00000445184 PLA2G2EQ9NZK7 142 aa12.1□□□□□ -0.47
LINC01004-201ENST00000445184 NUDT7P0C024 238 aa12.07□□□□□ -0.48
LINC01004-201ENST00000445184 HCSTQ9UBK5 93 aa12.07□□□□□ -0.48
LINC01004-201ENST00000445184 POTEEQ6S8J3 1075 aa12.03□□□□□ -0.48
LINC01004-201ENST00000445184 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
LINC01004-201ENST00000445184 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
LINC01004-201ENST00000445184 AXIN2Q9Y2T1 843 aa12.03□□□□□ -0.48
LINC01004-201ENST00000445184 KIF3CO14782 793 aa12.02□□□□□ -0.49
LINC01004-201ENST00000445184 C2orf72A6NCS6 295 aa12.01□□□□□ -0.49
LINC01004-201ENST00000445184 SLC34A2O95436 690 aa11.99□□□□□ -0.49
LINC01004-201ENST00000445184 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
LINC01004-201ENST00000445184 PCDHGA4Q9Y5G9 962 aa11.98□□□□□ -0.49
LINC01004-201ENST00000445184 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
LINC01004-201ENST00000445184 ADGRD1Q6QNK2 874 aa11.96□□□□□ -0.49
LINC01004-201ENST00000445184 ARHGAP33O14559 1287 aa11.94□□□□□ -0.5
LINC01004-201ENST00000445184 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
LINC01004-201ENST00000445184 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
LINC01004-201ENST00000445184 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
LINC01004-201ENST00000445184 TMC2Q8TDI7 906 aa11.9□□□□□ -0.5
LINC01004-201ENST00000445184 TK2O00142 265 aa11.88□□□□□ -0.51
LINC01004-201ENST00000445184 STK25O00506 426 aa11.84□□□□□ -0.51
LINC01004-201ENST00000445184 HRO43593 1189 aa11.84□□□□□ -0.51
LINC01004-201ENST00000445184 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
LINC01004-201ENST00000445184 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
LINC01004-201ENST00000445184 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
LINC01004-201ENST00000445184 PSEN2P49810 448 aa11.8□□□□□ -0.52
LINC01004-201ENST00000445184 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
LINC01004-201ENST00000445184 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
LINC01004-201ENST00000445184 PPP4R3BQ5MIZ7 849 aa11.76□□□□□ -0.53
LINC01004-201ENST00000445184 RGS20O76081 388 aa11.72□□□□□ -0.53
LINC01004-201ENST00000445184 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
LINC01004-201ENST00000445184 TBC1D12O60347 775 aa11.69□□□□□ -0.54
LINC01004-201ENST00000445184 PTPN5P54829 565 aa11.69□□□□□ -0.54
LINC01004-201ENST00000445184 PPP1R37O75864 691 aa11.67□□□□□ -0.54
LINC01004-201ENST00000445184 FOXK1P85037 733 aa11.67□□□□□ -0.54
LINC01004-201ENST00000445184 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
LINC01004-201ENST00000445184 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
LINC01004-201ENST00000445184 KCNK17Q96T54 332 aa11.67□□□□□ -0.54
LINC01004-201ENST00000445184 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
LINC01004-201ENST00000445184 IRX2Q9BZI1 471 aaPredicted RBP11.66□□□□□ -0.54
LINC01004-201ENST00000445184 VPS9D1Q9Y2B5 631 aa11.65□□□□□ -0.54
LINC01004-201ENST00000445184 GPHNQ9NQX3 736 aaPredicted RBP11.61□□□□□ -0.55
LINC01004-201ENST00000445184 A0A0G2JS52 829 aa11.58□□□□□ -0.56
LINC01004-201ENST00000445184 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
LINC01004-201ENST00000445184 DSG2Q14126 1118 aa11.57□□□□□ -0.56
LINC01004-201ENST00000445184 THSD4Q6ZMP0 1018 aa11.57□□□□□ -0.56
LINC01004-201ENST00000445184 GOLGA8CPA6NN73 597 aa11.55□□□□□ -0.56
LINC01004-201ENST00000445184 RGL2O15211 777 aa11.55□□□□□ -0.56
LINC01004-201ENST00000445184 BCL2L12Q9HB09 334 aa11.54□□□□□ -0.56
LINC01004-201ENST00000445184 BHMG1C9JSJ3 638 aaPredicted RBP11.53□□□□□ -0.56
LINC01004-201ENST00000445184 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
LINC01004-201ENST00000445184 WNT2BQ93097 391 aa11.52□□□□□ -0.57
LINC01004-201ENST00000445184 MRPL50Q8N5N7 158 aaKnown RBP11.5□□□□□ -0.57
LINC01004-201ENST00000445184 PTPREP23469 700 aa11.49□□□□□ -0.57
LINC01004-201ENST00000445184 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
LINC01004-201ENST00000445184 ZBED2Q9BTP6 218 aa11.47□□□□□ -0.57
LINC01004-201ENST00000445184 PKD2Q13563 968 aa11.46□□□□□ -0.57
LINC01004-201ENST00000445184 UPF1Q92900 1129 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC01004-201ENST00000445184 FOSBP53539 338 aa11.45□□□□□ -0.58
LINC01004-201ENST00000445184 NBPF3Q9H094 633 aa11.44□□□□□ -0.58
LINC01004-201ENST00000445184 Q6ZNB5 142 aa11.39□□□□□ -0.59
LINC01004-201ENST00000445184 JPH4Q96JJ6 628 aa11.38□□□□□ -0.59
LINC01004-201ENST00000445184 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
LINC01004-201ENST00000445184 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
LINC01004-201ENST00000445184 ITGBL1O95965 494 aaPredicted RBP11.36□□□□□ -0.59
LINC01004-201ENST00000445184 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
LINC01004-201ENST00000445184 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
LINC01004-201ENST00000445184 ANKK1Q8NFD2 765 aa11.34□□□□□ -0.59
LINC01004-201ENST00000445184 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
LINC01004-201ENST00000445184 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
LINC01004-201ENST00000445184 EVI5O60447 810 aa11.32□□□□□ -0.6
LINC01004-201ENST00000445184 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
LINC01004-201ENST00000445184 PPP1R3GB7ZBB8 358 aa11.27□□□□□ -0.61
LINC01004-201ENST00000445184 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.61
LINC01004-201ENST00000445184 PDE4AP27815 886 aa11.26□□□□□ -0.61
LINC01004-201ENST00000445184 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
LINC01004-201ENST00000445184 SOWAHBA6NEL2 793 aa11.25□□□□□ -0.61
LINC01004-201ENST00000445184 BCAMP50895 628 aa11.25□□□□□ -0.61
LINC01004-201ENST00000445184 KCNC4Q03721 635 aa11.24□□□□□ -0.61
LINC01004-201ENST00000445184 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
LINC01004-201ENST00000445184 PROX2Q3B8N5 592 aa11.24□□□□□ -0.61
LINC01004-201ENST00000445184 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
LINC01004-201ENST00000445184 MAP3K9P80192 1104 aa11.22□□□□□ -0.61
LINC01004-201ENST00000445184 NCKAP5LQ9HCH0 1330 aa11.21□□□□□ -0.61
LINC01004-201ENST00000445184 CHGAP10645 457 aaKnown RBP11.21□□□□□ -0.61
LINC01004-201ENST00000445184 COL9A1P20849 921 aa11.19□□□□□ -0.62
LINC01004-201ENST00000445184 ZFRQ96KR1 1074 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms