RNA–Protein interactions for RNA: ENST00000444870.6

SMIM1-201, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM1, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-201ENST00000444870 PLCH2O75038 1416 aa32■■■□□ 2.71
SMIM1-201ENST00000444870 HECW1Q76N89 1606 aa32■■■□□ 2.71
SMIM1-201ENST00000444870 MAGI2Q86UL8 1455 aa31.99■■■□□ 2.71
SMIM1-201ENST00000444870 EFCAB2Q5VUJ9 269 aa31.97■■■□□ 2.71
SMIM1-201ENST00000444870 SIGLEC1Q9BZZ2 1709 aa31.97■■■□□ 2.71
SMIM1-201ENST00000444870 CDK11AQ9UQ88 783 aaPredicted RBP31.92■■■□□ 2.7
SMIM1-201ENST00000444870 MYT1LQ9UL68 1186 aa31.91■■■□□ 2.7
SMIM1-201ENST00000444870 CEBPAP49715 358 aaPredicted RBP31.9■■■□□ 2.7
SMIM1-201ENST00000444870 ATP10AO60312 1499 aa31.89■■■□□ 2.7
SMIM1-201ENST00000444870 CERKQ8TCT0 537 aa31.88■■■□□ 2.69
SMIM1-201ENST00000444870 FMN1Q68DA7 1419 aa31.87■■■□□ 2.69
SMIM1-201ENST00000444870 AFAP1Q8N556 730 aa31.85■■■□□ 2.69
SMIM1-201ENST00000444870 C9orf84Q5VXU9 1444 aa31.84■■■□□ 2.69
SMIM1-201ENST00000444870 FER1L4A9Z1Z3 1794 aa31.84■■■□□ 2.69
SMIM1-201ENST00000444870 ARHGAP35Q9NRY4 1499 aa31.82■■■□□ 2.68
SMIM1-201ENST00000444870 ARHGEF12Q9NZN5 1544 aa31.79■■■□□ 2.68
SMIM1-201ENST00000444870 KIF14Q15058 1648 aa31.78■■■□□ 2.68
SMIM1-201ENST00000444870 ARHGAP5Q13017 1502 aa31.77■■■□□ 2.68
SMIM1-201ENST00000444870 MYO5CQ9NQX4 1742 aa31.77■■■□□ 2.68
SMIM1-201ENST00000444870 TROQ12816 1431 aaPredicted RBP31.75■■■□□ 2.67
SMIM1-201ENST00000444870 ZNF518AQ6AHZ1 1483 aa31.74■■■□□ 2.67
SMIM1-201ENST00000444870 CLIP1P30622 1438 aa31.73■■■□□ 2.67
SMIM1-201ENST00000444870 ESF1Q9H501 851 aaKnown RBP31.65■■■□□ 2.66
SMIM1-201ENST00000444870 DMRT2Q9Y5R5 561 aa31.65■■■□□ 2.66
SMIM1-201ENST00000444870 UHRF1BP1Q6BDS2 1440 aa31.64■■■□□ 2.66
SMIM1-201ENST00000444870 PREX1Q8TCU6 1659 aa31.64■■■□□ 2.65
SMIM1-201ENST00000444870 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
SMIM1-201ENST00000444870 KDM5CP41229 1560 aa31.62■■■□□ 2.65
SMIM1-201ENST00000444870 TRAPPC8Q9Y2L5 1435 aa31.59■■■□□ 2.65
SMIM1-201ENST00000444870 DIP2CQ9Y2E4 1556 aa31.59■■■□□ 2.65
SMIM1-201ENST00000444870 MLH3Q9UHC1 1453 aa31.55■■■□□ 2.64
SMIM1-201ENST00000444870 ZNF777Q9ULD5 760 aaPredicted RBP31.54■■■□□ 2.64
SMIM1-201ENST00000444870 LRRIQ1Q96JM4 1722 aa31.54■■■□□ 2.64
SMIM1-201ENST00000444870 ABCA6Q8N139 1617 aa31.52■■■□□ 2.64
SMIM1-201ENST00000444870 CDC42BPBQ9Y5S2 1711 aa31.52■■■□□ 2.64
SMIM1-201ENST00000444870 STRCQ7RTU9 1775 aa31.5■■■□□ 2.63
SMIM1-201ENST00000444870 CASKIN1Q8WXD9 1431 aa31.49■■■□□ 2.63
SMIM1-201ENST00000444870 SETD1BQ9UPS6 1966 aaKnown RBP31.48■■■□□ 2.63
SMIM1-201ENST00000444870 REREQ9P2R6 1566 aa31.47■■■□□ 2.63
SMIM1-201ENST00000444870 ABCC1P33527 1531 aa31.47■■■□□ 2.63
SMIM1-201ENST00000444870 CCDC18Q5T9S5 1454 aa31.46■■■□□ 2.63
SMIM1-201ENST00000444870 DISP3Q9P2K9 1392 aa31.45■■■□□ 2.63
SMIM1-201ENST00000444870 PREX2Q70Z35 1606 aa31.45■■■□□ 2.62
SMIM1-201ENST00000444870 C3P01024 1663 aa31.44■■■□□ 2.62
SMIM1-201ENST00000444870 AGLP35573 1532 aa31.44■■■□□ 2.62
SMIM1-201ENST00000444870 PTPRTO14522 1441 aa31.41■■■□□ 2.62
SMIM1-201ENST00000444870 HNRNPMP52272 730 aaKnown RBP eCLIP31.4■■■□□ 2.62
SMIM1-201ENST00000444870 ITSN2Q9NZM3 1697 aa31.39■■■□□ 2.62
SMIM1-201ENST00000444870 ILDR2Q71H61 639 aa31.37■■■□□ 2.61
SMIM1-201ENST00000444870 SPAG9O60271 1321 aaKnown RBP31.37■■■□□ 2.61
SMIM1-201ENST00000444870 CNTLNQ9NXG0 1405 aa31.37■■■□□ 2.61
SMIM1-201ENST00000444870 KIDINS220Q9ULH0 1771 aa31.36■■■□□ 2.61
SMIM1-201ENST00000444870 CDC42BPAQ5VT25 1732 aa31.32■■■□□ 2.6
SMIM1-201ENST00000444870 ZMYM3Q14202 1370 aa31.31■■■□□ 2.6
SMIM1-201ENST00000444870 SAMD9LQ8IVG5 1584 aa31.31■■■□□ 2.6
SMIM1-201ENST00000444870 CFDP1Q9UEE9 299 aaPredicted RBP31.3■■■□□ 2.6
SMIM1-201ENST00000444870 NCOA1Q15788 1441 aa31.3■■■□□ 2.6
SMIM1-201ENST00000444870 GPATCH8Q9UKJ3 1502 aaKnown RBP31.29■■■□□ 2.6
SMIM1-201ENST00000444870 SYCP2Q9BX26 1530 aa31.29■■■□□ 2.6
SMIM1-201ENST00000444870 NCKAP5LQ9HCH0 1330 aa31.28■■■□□ 2.6
SMIM1-201ENST00000444870 FYCO1Q9BQS8 1478 aa31.28■■■□□ 2.6
SMIM1-201ENST00000444870 GGT6Q6P531 493 aa31.26■■■□□ 2.59
SMIM1-201ENST00000444870 LTBP4Q8N2S1 1624 aa31.24■■■□□ 2.59
SMIM1-201ENST00000444870 CAMSAP1Q5T5Y3 1602 aa31.23■■■□□ 2.59
SMIM1-201ENST00000444870 NPATQ14207 1427 aa31.23■■■□□ 2.59
SMIM1-201ENST00000444870 CCNB3Q8WWL7 1395 aa31.22■■■□□ 2.59
SMIM1-201ENST00000444870 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
SMIM1-201ENST00000444870 SOCS7O14512 581 aa31.19■■■□□ 2.58
SMIM1-201ENST00000444870 ZNF335Q9H4Z2 1342 aaPredicted RBP31.18■■■□□ 2.58
SMIM1-201ENST00000444870 ATP7AQ04656 1500 aa31.18■■■□□ 2.58
SMIM1-201ENST00000444870 A2MP01023 1474 aa31.17■■■□□ 2.58
SMIM1-201ENST00000444870 KIAA1107Q9UPP5 1409 aa31.16■■■□□ 2.58
SMIM1-201ENST00000444870 MTUS2Q5JR59 1369 aa31.16■■■□□ 2.58
SMIM1-201ENST00000444870 PLEKHH2Q8IVE3 1493 aa31.14■■■□□ 2.58
SMIM1-201ENST00000444870 ZNF644Q9H582 1327 aaPredicted RBP31.14■■■□□ 2.58
SMIM1-201ENST00000444870 MROH2AA6NES4 1674 aa31.13■■■□□ 2.57
SMIM1-201ENST00000444870 UBAP1LF5GYI3 381 aa31.12■■■□□ 2.57
SMIM1-201ENST00000444870 CLTCQ00610 1675 aaKnown RBP31.12■■■□□ 2.57
SMIM1-201ENST00000444870 IQSEC2Q5JU85 1478 aa31.1■■■□□ 2.57
SMIM1-201ENST00000444870 PTPRKQ15262 1439 aa31.1■■■□□ 2.57
SMIM1-201ENST00000444870 PKD2Q13563 968 aa31.1■■■□□ 2.57
SMIM1-201ENST00000444870 SPATA31D1Q6ZQQ2 1576 aa31.09■■■□□ 2.57
SMIM1-201ENST00000444870 INO80Q9ULG1 1556 aaPredicted RBP31.07■■■□□ 2.56
SMIM1-201ENST00000444870 PLXNC1O60486 1568 aa31.06■■■□□ 2.56
SMIM1-201ENST00000444870 PPP6R1Q9UPN7 881 aa31.03■■■□□ 2.56
SMIM1-201ENST00000444870 MYO3AQ8NEV4 1616 aa31.02■■■□□ 2.56
SMIM1-201ENST00000444870 CEP170BQ9Y4F5 1589 aaPredicted RBP31.01■■■□□ 2.56
SMIM1-201ENST00000444870 PLA2R1Q13018 1463 aa31.01■■■□□ 2.55
SMIM1-201ENST00000444870 TCOF1Q13428 1488 aaKnown RBP30.97■■■□□ 2.55
SMIM1-201ENST00000444870 KIF3BO15066 747 aa30.96■■■□□ 2.55
SMIM1-201ENST00000444870 FBXO31Q5XUX0 539 aaPredicted RBP30.96■■■□□ 2.55
SMIM1-201ENST00000444870 MBD5Q9P267 1494 aa30.95■■■□□ 2.55
SMIM1-201ENST00000444870 ZNF142P52746 1687 aaPredicted RBP30.95■■■□□ 2.55
SMIM1-201ENST00000444870 TIAM1Q13009 1591 aa30.94■■■□□ 2.54
SMIM1-201ENST00000444870 DHX29Q7Z478 1369 aaKnown RBP30.93■■■□□ 2.54
SMIM1-201ENST00000444870 SCAF1Q9H7N4 1312 aaKnown RBP30.93■■■□□ 2.54
SMIM1-201ENST00000444870 ADGBQ8N7X0 1667 aa30.92■■■□□ 2.54
SMIM1-201ENST00000444870 A2ML1A8K2U0 1454 aa30.91■■■□□ 2.54
SMIM1-201ENST00000444870 RTEL1-TNFRSF6BF6WH68 1400 aa30.9■■■□□ 2.54
SMIM1-201ENST00000444870 EHBP1L1Q8N3D4 1523 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms