RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
LIN54-202ENST00000442461 PDCL3Q9H2J4 239 aa12.99□□□□□ -0.33
LIN54-202ENST00000442461 DHX57Q6P158 1386 aaKnown RBP12.98□□□□□ -0.33
LIN54-202ENST00000442461 RRP1P56182 461 aaKnown RBP12.98□□□□□ -0.33
LIN54-202ENST00000442461 CHMP5Q9NZZ3 219 aa12.98□□□□□ -0.33
LIN54-202ENST00000442461 CCDC66A2RUB6 948 aa12.98□□□□□ -0.33
LIN54-202ENST00000442461 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
LIN54-202ENST00000442461 MFAP1P55081 439 aaKnown RBP12.97□□□□□ -0.33
LIN54-202ENST00000442461 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
LIN54-202ENST00000442461 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
LIN54-202ENST00000442461 ESPNB1AK53 854 aa12.97□□□□□ -0.33
LIN54-202ENST00000442461 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
LIN54-202ENST00000442461 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
LIN54-202ENST00000442461 GOLGA6L4A6NEF3 574 aa12.96□□□□□ -0.33
LIN54-202ENST00000442461 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
LIN54-202ENST00000442461 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.34
LIN54-202ENST00000442461 KIAA1211Q6ZU35 1233 aa12.95□□□□□ -0.34
LIN54-202ENST00000442461 CHMP4BQ9H444 224 aaKnown RBP12.95□□□□□ -0.34
LIN54-202ENST00000442461 GOLGA6L1Q8N7Z2 621 aa12.94□□□□□ -0.34
LIN54-202ENST00000442461 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
LIN54-202ENST00000442461 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
LIN54-202ENST00000442461 PMFBP1Q8TBY8 1022 aa12.93□□□□□ -0.34
LIN54-202ENST00000442461 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
LIN54-202ENST00000442461 ARID3CA6NKF2 412 aa12.93□□□□□ -0.34
LIN54-202ENST00000442461 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
LIN54-202ENST00000442461 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
LIN54-202ENST00000442461 RAB3GAP2Q9H2M9 1393 aa12.93□□□□□ -0.34
LIN54-202ENST00000442461 NEUROD2Q15784 382 aa12.93□□□□□ -0.34
LIN54-202ENST00000442461 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
LIN54-202ENST00000442461 C11orf95C9JLR9 678 aaPredicted RBP12.92□□□□□ -0.34
LIN54-202ENST00000442461 VPS8Q8N3P4 1428 aa12.92□□□□□ -0.34
LIN54-202ENST00000442461 PHF14O94880 888 aa12.92□□□□□ -0.34
LIN54-202ENST00000442461 TAF3Q5VWG9 929 aa12.92□□□□□ -0.34
LIN54-202ENST00000442461 BACH2Q9BYV9 841 aa12.91□□□□□ -0.34
LIN54-202ENST00000442461 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
LIN54-202ENST00000442461 TRAK2O60296 914 aa12.91□□□□□ -0.34
LIN54-202ENST00000442461 NASPP49321 788 aaPredicted RBP12.91□□□□□ -0.34
LIN54-202ENST00000442461 RALBP1Q15311 655 aa12.91□□□□□ -0.34
LIN54-202ENST00000442461 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.34
LIN54-202ENST00000442461 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.34
LIN54-202ENST00000442461 HMGN5P82970 282 aaKnown RBP12.89□□□□□ -0.35
LIN54-202ENST00000442461 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
LIN54-202ENST00000442461 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
LIN54-202ENST00000442461 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
LIN54-202ENST00000442461 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
LIN54-202ENST00000442461 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
LIN54-202ENST00000442461 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
LIN54-202ENST00000442461 DIAPH3Q9NSV4 1193 aa12.88□□□□□ -0.35
LIN54-202ENST00000442461 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
LIN54-202ENST00000442461 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
LIN54-202ENST00000442461 SETQ01105 290 aaPredicted RBP12.87□□□□□ -0.35
LIN54-202ENST00000442461 GPS2Q13227 327 aa12.87□□□□□ -0.35
LIN54-202ENST00000442461 MCCP23508 829 aa12.86□□□□□ -0.35
LIN54-202ENST00000442461 PLIN1O60240 522 aa12.86□□□□□ -0.35
LIN54-202ENST00000442461 KTN1Q86UP2 1357 aaKnown RBP12.85□□□□□ -0.35
LIN54-202ENST00000442461 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
LIN54-202ENST00000442461 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
LIN54-202ENST00000442461 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
LIN54-202ENST00000442461 UQCRHP07919 91 aa12.84□□□□□ -0.35
LIN54-202ENST00000442461 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
LIN54-202ENST00000442461 NOM1Q5C9Z4 860 aaKnown RBP12.83□□□□□ -0.36
LIN54-202ENST00000442461 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
LIN54-202ENST00000442461 ZHX1Q9UKY1 873 aaPredicted RBP12.82□□□□□ -0.36
LIN54-202ENST00000442461 CALRP27797 417 aaKnown RBP12.82□□□□□ -0.36
LIN54-202ENST00000442461 CLCN1P35523 988 aa12.81□□□□□ -0.36
LIN54-202ENST00000442461 ZSCAN30Q86W11 494 aa12.81□□□□□ -0.36
LIN54-202ENST00000442461 POGKQ9P215 609 aa12.81□□□□□ -0.36
LIN54-202ENST00000442461 KANK4Q5T7N3 995 aaPredicted RBP12.8□□□□□ -0.36
LIN54-202ENST00000442461 PRDM10Q9NQV6 1147 aa12.8□□□□□ -0.36
LIN54-202ENST00000442461 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
LIN54-202ENST00000442461 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
LIN54-202ENST00000442461 ST18O60284 1047 aa12.78□□□□□ -0.36
LIN54-202ENST00000442461 KIF16BQ96L93 1317 aa12.78□□□□□ -0.36
LIN54-202ENST00000442461 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
LIN54-202ENST00000442461 PHLDB1Q86UU1 1377 aa12.78□□□□□ -0.36
LIN54-202ENST00000442461 CWC15Q9P013 229 aaKnown RBP12.78□□□□□ -0.36
LIN54-202ENST00000442461 TSPY4P0CV99 314 aa12.77□□□□□ -0.36
LIN54-202ENST00000442461 TSPY10P0CW01 314 aa12.77□□□□□ -0.36
LIN54-202ENST00000442461 ZNF592Q92610 1267 aa12.77□□□□□ -0.37
LIN54-202ENST00000442461 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
LIN54-202ENST00000442461 RGL3Q3MIN7 710 aa12.77□□□□□ -0.37
LIN54-202ENST00000442461 MCM4P33991 863 aa12.76□□□□□ -0.37
LIN54-202ENST00000442461 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
LIN54-202ENST00000442461 SOGA1O94964 1423 aa12.75□□□□□ -0.37
LIN54-202ENST00000442461 NUCB2P80303 420 aa12.74□□□□□ -0.37
LIN54-202ENST00000442461 CENPJQ9HC77 1338 aaPredicted RBP12.74□□□□□ -0.37
LIN54-202ENST00000442461 TMF1P82094 1093 aa12.74□□□□□ -0.37
LIN54-202ENST00000442461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
LIN54-202ENST00000442461 TSPYL1Q9H0U9 437 aa12.74□□□□□ -0.37
LIN54-202ENST00000442461 CGNQ9P2M7 1197 aaKnown RBP12.74□□□□□ -0.37
LIN54-202ENST00000442461 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
LIN54-202ENST00000442461 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
LIN54-202ENST00000442461 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
LIN54-202ENST00000442461 WASHC2CQ9Y4E1 1318 aa12.73□□□□□ -0.37
LIN54-202ENST00000442461 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
LIN54-202ENST00000442461 KCNJ4P48050 445 aa12.73□□□□□ -0.37
LIN54-202ENST00000442461 ITPRIPQ8IWB1 547 aa12.73□□□□□ -0.37
LIN54-202ENST00000442461 ARGLU1Q9NWB6 273 aaPredicted RBP12.73□□□□□ -0.37
LIN54-202ENST00000442461 FOXD4L5Q5VV16 416 aaPredicted RBP12.73□□□□□ -0.37
LIN54-202ENST00000442461 FOXD4L4Q8WXT5 416 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms