RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 KCTD17Q8N5Z5 321 aa8.94□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 MLLT3P42568 568 aaPredicted RBP8.93□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 TRAK2O60296 914 aa8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 PSEN1P49768 467 aa8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 DDX27Q96GQ7 796 aaKnown RBP8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 BCL11AQ9H165 835 aa8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 PCDHB8Q9UN66 801 aa8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 PCDHB13Q9Y5F0 798 aa8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 A6NJR5 290 aa8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 MFSD10Q14728 455 aa8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 FBXO22Q8NEZ5 403 aa8.92□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
ALMS1-IT1-201ENST00000441587 CLUAP1Q96AJ1 413 aa8.9□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 HMGB1P09429 215 aaKnown RBP8.89□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 SOX12O15370 315 aa8.88□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 RAD21O60216 631 aa8.88□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 CAMK2BQ13554 666 aa8.88□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 TRAIPQ9BWF2 469 aa8.88□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 ONECUT3O60422 494 aaPredicted RBP8.87□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 EFCAB3Q8N7B9 438 aa8.87□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 PHF8Q9UPP1 1060 aa8.87□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 CHMP4AQ9BY43 222 aa8.87□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 TSPYL2Q9H2G4 693 aaPredicted RBP8.86□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 CRISPLD2Q9H0B8 497 aa8.86□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 CCDC180Q9P1Z9 1646 aa8.86□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 GOPCQ9HD26 462 aa8.85□□□□□ -0.99
ALMS1-IT1-201ENST00000441587 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
ALMS1-IT1-201ENST00000441587 ZNF579Q8NAF0 562 aaKnown RBP8.83□□□□□ -1
ALMS1-IT1-201ENST00000441587 UBE2Q2Q8WVN8 375 aa8.83□□□□□ -1
ALMS1-IT1-201ENST00000441587 CABP2Q9NPB3 220 aa8.83□□□□□ -1
ALMS1-IT1-201ENST00000441587 HSP90B1P14625 803 aaKnown RBP8.81□□□□□ -1
ALMS1-IT1-201ENST00000441587 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
ALMS1-IT1-201ENST00000441587 ZNF777Q9ULD5 760 aaPredicted RBP8.81□□□□□ -1
ALMS1-IT1-201ENST00000441587 PARP9Q8IXQ6 854 aa8.8□□□□□ -1
ALMS1-IT1-201ENST00000441587 SERPINA10Q9UK55 444 aa8.8□□□□□ -1
ALMS1-IT1-201ENST00000441587 AMHR2Q16671 573 aa8.8□□□□□ -1
ALMS1-IT1-201ENST00000441587 TMCO4Q5TGY1 634 aa8.79□□□□□ -1
ALMS1-IT1-201ENST00000441587 SP7Q8TDD2 431 aaPredicted RBP8.79□□□□□ -1
ALMS1-IT1-201ENST00000441587 CCDC102AQ96A19 550 aa8.79□□□□□ -1
ALMS1-IT1-201ENST00000441587 PCMTD1Q96MG8 357 aaPredicted RBP8.79□□□□□ -1
ALMS1-IT1-201ENST00000441587 MAP2K5Q13163 448 aa8.78□□□□□ -1
ALMS1-IT1-201ENST00000441587 RGS22Q8NE09 1264 aa8.78□□□□□ -1
ALMS1-IT1-201ENST00000441587 GPR37O15354 613 aa8.77□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 PROSER2Q86WR7 435 aaPredicted RBP8.77□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 IRF6O14896 467 aa8.77□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 BRD2P25440 801 aaKnown RBP8.77□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 MCM6Q14566 821 aa8.77□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 AKT1S1Q96B36 256 aa8.77□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 SPDYE16A6NNV3 312 aaPredicted RBP8.75□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 TTLL12Q14166 644 aaPredicted RBP8.75□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 DPYSL4O14531 572 aa8.74□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 IGSF3O75054 1194 aa8.74□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 GZF1Q9H116 711 aaPredicted RBP8.73□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 MFAP1P55081 439 aaKnown RBP8.72□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 PDIA6Q15084 440 aa8.72□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 PPP1R15BQ5SWA1 713 aa8.72□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 NUTM2FA1L443 756 aa8.71□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 PDE4CQ08493 712 aa8.71□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 RETREG2Q8NC44 543 aa8.71□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 CCDC61Q9Y6R9 512 aa8.71□□□□□ -1.01
ALMS1-IT1-201ENST00000441587 RBM25P49756 843 aaKnown RBP8.71□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 IFNL1Q8IU54 200 aa8.71□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 MS4A4AQ96JQ5 239 aa8.71□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 FNBP4Q8N3X1 1017 aaPredicted RBP8.7□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 ZCCHC6Q5VYS8 1495 aaKnown RBP8.7□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 TAF7LQ5H9L4 462 aa8.69□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 GNPATO15228 680 aa8.68□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 NEFLP07196 543 aa8.68□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 FOXD4L5Q5VV16 416 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 REM2Q8IYK8 340 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 FOXD4L4Q8WXT5 416 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 DHX37Q8IY37 1157 aaKnown RBP8.67□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 RBM42Q9BTD8 480 aaKnown RBP8.67□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 EMILIN3Q9NT22 766 aa8.67□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 GIGYF2Q6Y7W6 1299 aaKnown RBP8.66□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 FBXW7Q969H0 707 aa8.66□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 MS4A1P11836 297 aa8.65□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 SH3D19Q5HYK7 790 aa8.65□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 PUS7Q96PZ0 661 aaKnown RBP8.65□□□□□ -1.02
ALMS1-IT1-201ENST00000441587 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 IRF5Q13568 498 aa8.65□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 HIC1Q14526 733 aa8.65□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 FAM9AQ8IZU1 332 aaPredicted RBP8.65□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 ZNF428Q96B54 188 aa8.65□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 E9PSI1 815 aa8.62□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 FCHSD2O94868 740 aa8.62□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 FECHP22830 423 aa8.62□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 GOLGA2Q08379 1002 aa8.62□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 ACIN1Q9UKV3 1341 aaKnown RBP8.61□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 POLR3GLQ9BT43 218 aa8.61□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 MAP3K13O43283 966 aa8.6□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 PPP1R15AO75807 674 aaPredicted RBP8.6□□□□□ -1.03
ALMS1-IT1-201ENST00000441587 FARP1Q9Y4F1 1045 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms