RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 RIMBP3Q9UFD9 1639 aa19.63■□□□□ 0.73
LINC01271-201ENST00000441214 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
LINC01271-201ENST00000441214 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
LINC01271-201ENST00000441214 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
LINC01271-201ENST00000441214 PLEKHD1A6NEE1 506 aa19.6■□□□□ 0.73
LINC01271-201ENST00000441214 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
LINC01271-201ENST00000441214 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
LINC01271-201ENST00000441214 PODXL2Q9NZ53 605 aa19.59■□□□□ 0.73
LINC01271-201ENST00000441214 KIF14Q15058 1648 aa19.58■□□□□ 0.73
LINC01271-201ENST00000441214 SUPT6HQ7KZ85 1726 aaKnown RBP19.58■□□□□ 0.73
LINC01271-201ENST00000441214 ZCCHC11Q5TAX3 1644 aaKnown RBP19.58■□□□□ 0.72
LINC01271-201ENST00000441214 PLEKHG5O94827 1062 aa19.56■□□□□ 0.72
LINC01271-201ENST00000441214 TROQ12816 1431 aaPredicted RBP19.55■□□□□ 0.72
LINC01271-201ENST00000441214 CCNB3Q8WWL7 1395 aa19.52■□□□□ 0.72
LINC01271-201ENST00000441214 UHRF1BP1LA0JNW5 1464 aa19.51■□□□□ 0.71
LINC01271-201ENST00000441214 KDM5BQ9UGL1 1544 aa19.51■□□□□ 0.71
LINC01271-201ENST00000441214 ZNF777Q9ULD5 760 aaPredicted RBP19.5■□□□□ 0.71
LINC01271-201ENST00000441214 MYOM3Q5VTT5 1437 aa19.48■□□□□ 0.71
LINC01271-201ENST00000441214 RRBP1Q9P2E9 1410 aaKnown RBP19.48■□□□□ 0.71
LINC01271-201ENST00000441214 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
LINC01271-201ENST00000441214 ZNF644Q9H582 1327 aaPredicted RBP19.48■□□□□ 0.71
LINC01271-201ENST00000441214 FGD6Q6ZV73 1430 aa19.48■□□□□ 0.71
LINC01271-201ENST00000441214 ASXL2Q76L83 1435 aa19.43■□□□□ 0.7
LINC01271-201ENST00000441214 TTC37Q6PGP7 1564 aa19.42■□□□□ 0.7
LINC01271-201ENST00000441214 CFDP1Q9UEE9 299 aaPredicted RBP19.41■□□□□ 0.7
LINC01271-201ENST00000441214 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
LINC01271-201ENST00000441214 GPATCH8Q9UKJ3 1502 aaKnown RBP19.39■□□□□ 0.7
LINC01271-201ENST00000441214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.39■□□□□ 0.69
LINC01271-201ENST00000441214 ABCC10Q5T3U5 1492 aa19.39■□□□□ 0.69
LINC01271-201ENST00000441214 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.39■□□□□ 0.69
LINC01271-201ENST00000441214 WDR7Q9Y4E6 1490 aa19.38■□□□□ 0.69
LINC01271-201ENST00000441214 CDC42BPAQ5VT25 1732 aa19.38■□□□□ 0.69
LINC01271-201ENST00000441214 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
LINC01271-201ENST00000441214 PTPRKQ15262 1439 aa19.32■□□□□ 0.68
LINC01271-201ENST00000441214 FKBP8Q14318 412 aa19.32■□□□□ 0.68
LINC01271-201ENST00000441214 ITSN2Q9NZM3 1697 aa19.32■□□□□ 0.68
LINC01271-201ENST00000441214 CDC42BPBQ9Y5S2 1711 aa19.31■□□□□ 0.68
LINC01271-201ENST00000441214 CAMSAP2Q08AD1 1489 aa19.31■□□□□ 0.68
LINC01271-201ENST00000441214 ARHGAP5Q13017 1502 aa19.3■□□□□ 0.68
LINC01271-201ENST00000441214 HNRNPMP52272 730 aaKnown RBP eCLIP19.3■□□□□ 0.68
LINC01271-201ENST00000441214 BCANQ96GW7 911 aa19.3■□□□□ 0.68
LINC01271-201ENST00000441214 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
LINC01271-201ENST00000441214 GLIPR1L2Q4G1C9 344 aa19.28■□□□□ 0.68
LINC01271-201ENST00000441214 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
LINC01271-201ENST00000441214 PREX2Q70Z35 1606 aa19.27■□□□□ 0.68
LINC01271-201ENST00000441214 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.68
LINC01271-201ENST00000441214 IL27Q8NEV9 243 aa19.26■□□□□ 0.67
LINC01271-201ENST00000441214 TCOF1Q13428 1488 aaKnown RBP19.26■□□□□ 0.67
LINC01271-201ENST00000441214 NEFLP07196 543 aa19.25■□□□□ 0.67
LINC01271-201ENST00000441214 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
LINC01271-201ENST00000441214 FAM69CQ0P6D2 419 aa19.21■□□□□ 0.67
LINC01271-201ENST00000441214 PLCH2O75038 1416 aa19.21■□□□□ 0.67
LINC01271-201ENST00000441214 ABCC5O15440 1437 aa19.21■□□□□ 0.67
LINC01271-201ENST00000441214 DAPK1P53355 1430 aa19.21■□□□□ 0.67
LINC01271-201ENST00000441214 ABCA9Q8IUA7 1624 aa19.2■□□□□ 0.66
LINC01271-201ENST00000441214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.2■□□□□ 0.66
LINC01271-201ENST00000441214 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
LINC01271-201ENST00000441214 MAPKBP1O60336 1514 aa19.2■□□□□ 0.66
LINC01271-201ENST00000441214 CD109Q6YHK3 1445 aa19.18■□□□□ 0.66
LINC01271-201ENST00000441214 EFCAB2Q5VUJ9 269 aa19.18■□□□□ 0.66
LINC01271-201ENST00000441214 DNMT1P26358 1616 aaKnown RBP19.17■□□□□ 0.66
LINC01271-201ENST00000441214 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
LINC01271-201ENST00000441214 FANCAO15360 1455 aa19.16■□□□□ 0.66
LINC01271-201ENST00000441214 TSPOAP1O95153 1857 aa19.16■□□□□ 0.66
LINC01271-201ENST00000441214 ARHGEF12Q9NZN5 1544 aa19.16■□□□□ 0.66
LINC01271-201ENST00000441214 C11orf95C9JLR9 678 aaPredicted RBP19.13■□□□□ 0.65
LINC01271-201ENST00000441214 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
LINC01271-201ENST00000441214 MBD5Q9P267 1494 aa19.13■□□□□ 0.65
LINC01271-201ENST00000441214 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
LINC01271-201ENST00000441214 RTN4Q9NQC3 1192 aaKnown RBP19.12■□□□□ 0.65
LINC01271-201ENST00000441214 DIP2BQ9P265 1576 aa19.11■□□□□ 0.65
LINC01271-201ENST00000441214 RTL5Q5HYW3 569 aaPredicted RBP19.11■□□□□ 0.65
LINC01271-201ENST00000441214 TRAPPC8Q9Y2L5 1435 aa19.11■□□□□ 0.65
LINC01271-201ENST00000441214 TSPY4P0CV99 314 aa19.11■□□□□ 0.65
LINC01271-201ENST00000441214 TSPY10P0CW01 314 aa19.11■□□□□ 0.65
LINC01271-201ENST00000441214 NOP58Q9Y2X3 529 aaKnown RBP19.11■□□□□ 0.65
LINC01271-201ENST00000441214 KDM6BO15054 1643 aa19.1■□□□□ 0.65
LINC01271-201ENST00000441214 NAIPQ13075 1403 aa19.1■□□□□ 0.65
LINC01271-201ENST00000441214 RSPH6AQ9H0K4 717 aa19.09■□□□□ 0.65
LINC01271-201ENST00000441214 CROCC2H7BZ55 1655 aa19.09■□□□□ 0.65
LINC01271-201ENST00000441214 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
LINC01271-201ENST00000441214 ABCC1P33527 1531 aa19.08■□□□□ 0.64
LINC01271-201ENST00000441214 ADGRL1O94910 1474 aa19.08■□□□□ 0.64
LINC01271-201ENST00000441214 SCAPERQ9BY12 1400 aa19.08■□□□□ 0.64
LINC01271-201ENST00000441214 CCDC141Q6ZP82 1450 aa19.07■□□□□ 0.64
LINC01271-201ENST00000441214 HFM1A2PYH4 1435 aa19.07■□□□□ 0.64
LINC01271-201ENST00000441214 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
LINC01271-201ENST00000441214 AKNAQ7Z591 1439 aa19.07■□□□□ 0.64
LINC01271-201ENST00000441214 ZMYND15Q9H091 742 aa19.06■□□□□ 0.64
LINC01271-201ENST00000441214 MAP3K4Q9Y6R4 1608 aa19.05■□□□□ 0.64
LINC01271-201ENST00000441214 RAPGEF3O95398 923 aa19.05■□□□□ 0.64
LINC01271-201ENST00000441214 KIF13AQ9H1H9 1805 aa19.05■□□□□ 0.64
LINC01271-201ENST00000441214 NBR1Q14596 966 aa19.04■□□□□ 0.64
LINC01271-201ENST00000441214 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
LINC01271-201ENST00000441214 NCOA1Q15788 1441 aa19.03■□□□□ 0.64
LINC01271-201ENST00000441214 ARHGEF5Q12774 1597 aa19.03■□□□□ 0.64
LINC01271-201ENST00000441214 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.64
LINC01271-201ENST00000441214 KIAA1107Q9UPP5 1409 aa19.01■□□□□ 0.63
LINC01271-201ENST00000441214 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
LINC01271-201ENST00000441214 ADGBQ8N7X0 1667 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms