RNA–Protein interactions for RNA: ENST00000440539.1

AC253536.4-201, humanhuman

BASIC

Gene AC253536.4, Length 267 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC253536.4-201ENST00000440539 MLECQ14165 292 aa23.83■■□□□ 1.41
AC253536.4-201ENST00000440539 ARHGEF12Q9NZN5 1544 aa23.83■■□□□ 1.41
AC253536.4-201ENST00000440539 PLEKHD1A6NEE1 506 aa23.82■■□□□ 1.4
AC253536.4-201ENST00000440539 HECW1Q76N89 1606 aa23.8■■□□□ 1.4
AC253536.4-201ENST00000440539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.79■■□□□ 1.4
AC253536.4-201ENST00000440539 SETD1BQ9UPS6 1966 aaKnown RBP23.78■■□□□ 1.4
AC253536.4-201ENST00000440539 PTPRTO14522 1441 aa23.75■■□□□ 1.39
AC253536.4-201ENST00000440539 ATP10AO60312 1499 aa23.75■■□□□ 1.39
AC253536.4-201ENST00000440539 CEBPAP49715 358 aaPredicted RBP23.73■■□□□ 1.39
AC253536.4-201ENST00000440539 UHRF1BP1Q6BDS2 1440 aa23.73■■□□□ 1.39
AC253536.4-201ENST00000440539 C9orf84Q5VXU9 1444 aa23.72■■□□□ 1.39
AC253536.4-201ENST00000440539 IQSEC2Q5JU85 1478 aa23.72■■□□□ 1.39
AC253536.4-201ENST00000440539 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.38
AC253536.4-201ENST00000440539 LTBP4Q8N2S1 1624 aa23.68■■□□□ 1.38
AC253536.4-201ENST00000440539 PLCH2O75038 1416 aa23.67■■□□□ 1.38
AC253536.4-201ENST00000440539 EFCAB2Q5VUJ9 269 aa23.56■■□□□ 1.36
AC253536.4-201ENST00000440539 C3P01024 1663 aa23.55■■□□□ 1.36
AC253536.4-201ENST00000440539 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
AC253536.4-201ENST00000440539 ZNF518AQ6AHZ1 1483 aa23.55■■□□□ 1.36
AC253536.4-201ENST00000440539 REREQ9P2R6 1566 aa23.53■■□□□ 1.36
AC253536.4-201ENST00000440539 NCOA1Q15788 1441 aa23.53■■□□□ 1.36
AC253536.4-201ENST00000440539 KDM5CP41229 1560 aa23.52■■□□□ 1.36
AC253536.4-201ENST00000440539 TRAPPC8Q9Y2L5 1435 aa23.52■■□□□ 1.36
AC253536.4-201ENST00000440539 MYO5CQ9NQX4 1742 aa23.51■■□□□ 1.35
AC253536.4-201ENST00000440539 CDK13Q14004 1512 aaKnown RBP23.49■■□□□ 1.35
AC253536.4-201ENST00000440539 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
AC253536.4-201ENST00000440539 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
AC253536.4-201ENST00000440539 AGLP35573 1532 aa23.46■■□□□ 1.35
AC253536.4-201ENST00000440539 AFAP1Q8N556 730 aa23.46■■□□□ 1.35
AC253536.4-201ENST00000440539 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
AC253536.4-201ENST00000440539 UBAP1LF5GYI3 381 aa23.43■■□□□ 1.34
AC253536.4-201ENST00000440539 MLH3Q9UHC1 1453 aa23.43■■□□□ 1.34
AC253536.4-201ENST00000440539 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
AC253536.4-201ENST00000440539 CAMSAP1Q5T5Y3 1602 aa23.41■■□□□ 1.34
AC253536.4-201ENST00000440539 ABCA6Q8N139 1617 aa23.4■■□□□ 1.34
AC253536.4-201ENST00000440539 MYT1LQ9UL68 1186 aa23.39■■□□□ 1.33
AC253536.4-201ENST00000440539 NPATQ14207 1427 aa23.38■■□□□ 1.33
AC253536.4-201ENST00000440539 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
AC253536.4-201ENST00000440539 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
AC253536.4-201ENST00000440539 ZNF335Q9H4Z2 1342 aaPredicted RBP23.36■■□□□ 1.33
AC253536.4-201ENST00000440539 KIF14Q15058 1648 aa23.35■■□□□ 1.33
AC253536.4-201ENST00000440539 EEA1Q15075 1411 aa23.33■■□□□ 1.32
AC253536.4-201ENST00000440539 MROH2AA6NES4 1674 aa23.32■■□□□ 1.32
AC253536.4-201ENST00000440539 PKD2Q13563 968 aa23.32■■□□□ 1.32
AC253536.4-201ENST00000440539 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
AC253536.4-201ENST00000440539 TROQ12816 1431 aaPredicted RBP23.31■■□□□ 1.32
AC253536.4-201ENST00000440539 PLA2R1Q13018 1463 aa23.3■■□□□ 1.32
AC253536.4-201ENST00000440539 MED1Q15648 1581 aaPredicted RBP23.3■■□□□ 1.32
AC253536.4-201ENST00000440539 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
AC253536.4-201ENST00000440539 FMN1Q68DA7 1419 aa23.28■■□□□ 1.32
AC253536.4-201ENST00000440539 ZMYM3Q14202 1370 aa23.27■■□□□ 1.32
AC253536.4-201ENST00000440539 KIDINS220Q9ULH0 1771 aa23.27■■□□□ 1.32
AC253536.4-201ENST00000440539 TCOF1Q13428 1488 aaKnown RBP23.26■■□□□ 1.31
AC253536.4-201ENST00000440539 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
AC253536.4-201ENST00000440539 CLIP1P30622 1438 aa23.25■■□□□ 1.31
AC253536.4-201ENST00000440539 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
AC253536.4-201ENST00000440539 ABCC1P33527 1531 aa23.24■■□□□ 1.31
AC253536.4-201ENST00000440539 HSPA1LP34931 641 aa23.24■■□□□ 1.31
AC253536.4-201ENST00000440539 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
AC253536.4-201ENST00000440539 SUPT6HQ7KZ85 1726 aaKnown RBP23.2■■□□□ 1.3
AC253536.4-201ENST00000440539 PREX2Q70Z35 1606 aa23.2■■□□□ 1.3
AC253536.4-201ENST00000440539 MYO3AQ8NEV4 1616 aa23.2■■□□□ 1.3
AC253536.4-201ENST00000440539 PPP6R1Q9UPN7 881 aa23.19■■□□□ 1.3
AC253536.4-201ENST00000440539 CEP170BQ9Y4F5 1589 aaPredicted RBP23.18■■□□□ 1.3
AC253536.4-201ENST00000440539 TOM1O60784 492 aa23.18■■□□□ 1.3
AC253536.4-201ENST00000440539 PTPRKQ15262 1439 aa23.15■■□□□ 1.3
AC253536.4-201ENST00000440539 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.3
AC253536.4-201ENST00000440539 CPS1P31327 1500 aa23.13■■□□□ 1.29
AC253536.4-201ENST00000440539 PIP4K2BP78356 416 aa23.13■■□□□ 1.29
AC253536.4-201ENST00000440539 CLTCQ00610 1675 aaKnown RBP23.13■■□□□ 1.29
AC253536.4-201ENST00000440539 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
AC253536.4-201ENST00000440539 LRRIQ1Q96JM4 1722 aa23.12■■□□□ 1.29
AC253536.4-201ENST00000440539 ARHGAP35Q9NRY4 1499 aa23.11■■□□□ 1.29
AC253536.4-201ENST00000440539 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
AC253536.4-201ENST00000440539 CDC42BPAQ5VT25 1732 aa23.07■■□□□ 1.28
AC253536.4-201ENST00000440539 PLXNC1O60486 1568 aa23.06■■□□□ 1.28
AC253536.4-201ENST00000440539 A2ML1A8K2U0 1454 aa23.06■■□□□ 1.28
AC253536.4-201ENST00000440539 SPAG9O60271 1321 aaKnown RBP23.06■■□□□ 1.28
AC253536.4-201ENST00000440539 SHANK2Q9UPX8 1470 aa23.05■■□□□ 1.28
AC253536.4-201ENST00000440539 DNMT1P26358 1616 aaKnown RBP23.05■■□□□ 1.28
AC253536.4-201ENST00000440539 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
AC253536.4-201ENST00000440539 A2MP01023 1474 aa23.01■■□□□ 1.27
AC253536.4-201ENST00000440539 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
AC253536.4-201ENST00000440539 NEURL4Q96JN8 1562 aa23.01■■□□□ 1.27
AC253536.4-201ENST00000440539 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
AC253536.4-201ENST00000440539 SYCP2Q9BX26 1530 aa22.99■■□□□ 1.27
AC253536.4-201ENST00000440539 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
AC253536.4-201ENST00000440539 GGT6Q6P531 493 aa22.99■■□□□ 1.27
AC253536.4-201ENST00000440539 ALKQ9UM73 1620 aa22.99■■□□□ 1.27
AC253536.4-201ENST00000440539 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
AC253536.4-201ENST00000440539 KIAA1107Q9UPP5 1409 aa22.97■■□□□ 1.27
AC253536.4-201ENST00000440539 HNRNPMP52272 730 aaKnown RBP eCLIP22.96■■□□□ 1.27
AC253536.4-201ENST00000440539 ZNF777Q9ULD5 760 aaPredicted RBP22.96■■□□□ 1.27
AC253536.4-201ENST00000440539 VWDEQ8N2E2 1590 aa22.95■■□□□ 1.26
AC253536.4-201ENST00000440539 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
AC253536.4-201ENST00000440539 GPATCH8Q9UKJ3 1502 aaKnown RBP22.92■■□□□ 1.26
AC253536.4-201ENST00000440539 PLEKHH2Q8IVE3 1493 aa22.92■■□□□ 1.26
AC253536.4-201ENST00000440539 ANKLE2Q86XL3 938 aa22.91■■□□□ 1.26
AC253536.4-201ENST00000440539 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
AC253536.4-201ENST00000440539 MED14O60244 1454 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms