RNA–Protein interactions for RNA: ENST00000440539.1

AC253536.4-201, humanhuman

BASIC

Gene AC253536.4, Length 267 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC253536.4-201ENST00000440539 NISCHQ9Y2I1 1504 aa35.83■■■■□ 3.33
AC253536.4-201ENST00000440539 ABCC9O60706 1549 aa33.23■■■□□ 2.91
AC253536.4-201ENST00000440539 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
AC253536.4-201ENST00000440539 DNAJC5BQ9UF47 199 aa31.93■■■□□ 2.7
AC253536.4-201ENST00000440539 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
AC253536.4-201ENST00000440539 NACADO15069 1562 aa30.96■■■□□ 2.55
AC253536.4-201ENST00000440539 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.52
AC253536.4-201ENST00000440539 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
AC253536.4-201ENST00000440539 DCAF8L2P0C7V8 631 aa30.5■■■□□ 2.47
AC253536.4-201ENST00000440539 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.47
AC253536.4-201ENST00000440539 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
AC253536.4-201ENST00000440539 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
AC253536.4-201ENST00000440539 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
AC253536.4-201ENST00000440539 CC2D2AQ9P2K1 1620 aa30.02■■■□□ 2.4
AC253536.4-201ENST00000440539 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
AC253536.4-201ENST00000440539 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
AC253536.4-201ENST00000440539 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
AC253536.4-201ENST00000440539 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
AC253536.4-201ENST00000440539 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
AC253536.4-201ENST00000440539 CUX2O14529 1486 aa29.06■■■□□ 2.24
AC253536.4-201ENST00000440539 ERCC6Q03468 1493 aa28.76■■■□□ 2.19
AC253536.4-201ENST00000440539 NCAPD3P42695 1498 aa28.6■■■□□ 2.17
AC253536.4-201ENST00000440539 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
AC253536.4-201ENST00000440539 NESP48681 1621 aa28.32■■■□□ 2.12
AC253536.4-201ENST00000440539 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
AC253536.4-201ENST00000440539 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
AC253536.4-201ENST00000440539 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
AC253536.4-201ENST00000440539 TRIM41Q8WV44 630 aa28.21■■■□□ 2.11
AC253536.4-201ENST00000440539 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
AC253536.4-201ENST00000440539 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
AC253536.4-201ENST00000440539 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
AC253536.4-201ENST00000440539 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
AC253536.4-201ENST00000440539 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
AC253536.4-201ENST00000440539 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
AC253536.4-201ENST00000440539 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
AC253536.4-201ENST00000440539 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.03
AC253536.4-201ENST00000440539 WDR62O43379 1518 aa27.68■■■□□ 2.02
AC253536.4-201ENST00000440539 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
AC253536.4-201ENST00000440539 OSCARQ8IYS5 282 aa27.59■■■□□ 2.01
AC253536.4-201ENST00000440539 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
AC253536.4-201ENST00000440539 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
AC253536.4-201ENST00000440539 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
AC253536.4-201ENST00000440539 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
AC253536.4-201ENST00000440539 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
AC253536.4-201ENST00000440539 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
AC253536.4-201ENST00000440539 CFTRP13569 1480 aa27.19■■□□□ 1.94
AC253536.4-201ENST00000440539 WIZO95785 1651 aa27.18■■□□□ 1.94
AC253536.4-201ENST00000440539 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
AC253536.4-201ENST00000440539 ARHGEF11O15085 1522 aa27.11■■□□□ 1.93
AC253536.4-201ENST00000440539 CYB5RLQ6IPT4 315 aa26.95■■□□□ 1.9
AC253536.4-201ENST00000440539 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
AC253536.4-201ENST00000440539 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
AC253536.4-201ENST00000440539 TRHP20396 242 aaPredicted RBP26.89■■□□□ 1.9
AC253536.4-201ENST00000440539 PRDM2Q13029 1718 aa26.83■■□□□ 1.89
AC253536.4-201ENST00000440539 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
AC253536.4-201ENST00000440539 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
AC253536.4-201ENST00000440539 EIF4G3O43432 1585 aaKnown RBP26.74■■□□□ 1.87
AC253536.4-201ENST00000440539 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
AC253536.4-201ENST00000440539 AEBP2Q6ZN18 517 aaPredicted RBP26.72■■□□□ 1.87
AC253536.4-201ENST00000440539 RSF1Q96T23 1441 aaPredicted RBP26.72■■□□□ 1.87
AC253536.4-201ENST00000440539 CHD1O14646 1710 aa26.69■■□□□ 1.86
AC253536.4-201ENST00000440539 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
AC253536.4-201ENST00000440539 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.85
AC253536.4-201ENST00000440539 TARBP1Q13395 1621 aaKnown RBP26.56■■□□□ 1.84
AC253536.4-201ENST00000440539 DNMBPQ6XZF7 1577 aa26.55■■□□□ 1.84
AC253536.4-201ENST00000440539 FBLN2P98095 1184 aa26.53■■□□□ 1.84
AC253536.4-201ENST00000440539 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
AC253536.4-201ENST00000440539 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
AC253536.4-201ENST00000440539 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
AC253536.4-201ENST00000440539 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
AC253536.4-201ENST00000440539 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
AC253536.4-201ENST00000440539 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
AC253536.4-201ENST00000440539 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
AC253536.4-201ENST00000440539 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
AC253536.4-201ENST00000440539 SOGA1O94964 1423 aa26.26■■□□□ 1.79
AC253536.4-201ENST00000440539 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
AC253536.4-201ENST00000440539 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
AC253536.4-201ENST00000440539 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
AC253536.4-201ENST00000440539 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
AC253536.4-201ENST00000440539 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
AC253536.4-201ENST00000440539 FGD5Q6ZNL6 1462 aa26.1■■□□□ 1.77
AC253536.4-201ENST00000440539 PBRM1Q86U86 1689 aa25.95■■□□□ 1.74
AC253536.4-201ENST00000440539 CUX1P39880 1505 aa25.94■■□□□ 1.74
AC253536.4-201ENST00000440539 ERCC6L2Q5T890 1561 aa25.88■■□□□ 1.73
AC253536.4-201ENST00000440539 KIF13AQ9H1H9 1805 aa25.84■■□□□ 1.73
AC253536.4-201ENST00000440539 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
AC253536.4-201ENST00000440539 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
AC253536.4-201ENST00000440539 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
AC253536.4-201ENST00000440539 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
AC253536.4-201ENST00000440539 NUP160Q12769 1436 aa25.77■■□□□ 1.72
AC253536.4-201ENST00000440539 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
AC253536.4-201ENST00000440539 ILDR1Q86SU0 546 aaPredicted RBP25.66■■□□□ 1.7
AC253536.4-201ENST00000440539 ADAMTS12P58397 1594 aa25.65■■□□□ 1.7
AC253536.4-201ENST00000440539 ABCC10Q5T3U5 1492 aa25.62■■□□□ 1.69
AC253536.4-201ENST00000440539 KDM4FA0A1W2PPD8 638 aa25.62■■□□□ 1.69
AC253536.4-201ENST00000440539 FAM69CQ0P6D2 419 aa25.59■■□□□ 1.69
AC253536.4-201ENST00000440539 FHAD1B1AJZ9 1412 aa25.58■■□□□ 1.69
AC253536.4-201ENST00000440539 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
AC253536.4-201ENST00000440539 MAPKBP1O60336 1514 aa25.53■■□□□ 1.68
AC253536.4-201ENST00000440539 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms