RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 RNF166Q96A37 237 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P12-201ENST00000438594 BCL11BQ9C0K0 894 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P12-201ENST00000438594 ZSWIM6Q9HCJ5 1215 aa8.65□□□□□ -1.02
HMGB1P12-201ENST00000438594 STK24Q9Y6E0 443 aa8.65□□□□□ -1.02
HMGB1P12-201ENST00000438594 NLRP6P59044 892 aa8.64□□□□□ -1.03
HMGB1P12-201ENST00000438594 ARSIQ5FYB1 569 aa8.64□□□□□ -1.03
HMGB1P12-201ENST00000438594 TAOK2Q9UL54 1235 aa8.64□□□□□ -1.03
HMGB1P12-201ENST00000438594 GPR153Q6NV75 609 aa8.62□□□□□ -1.03
HMGB1P12-201ENST00000438594 ZNF687Q8N1G0 1237 aa8.62□□□□□ -1.03
HMGB1P12-201ENST00000438594 MYT1LQ9UL68 1186 aa8.61□□□□□ -1.03
HMGB1P12-201ENST00000438594 KHSRPQ92945 711 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGB1P12-201ENST00000438594 STK25O00506 426 aa8.59□□□□□ -1.03
HMGB1P12-201ENST00000438594 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
HMGB1P12-201ENST00000438594 ECM2O94769 699 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P12-201ENST00000438594 FBXO22Q8NEZ5 403 aa8.57□□□□□ -1.04
HMGB1P12-201ENST00000438594 ZNF316A6NFI3 1004 aaPredicted RBP8.55□□□□□ -1.04
HMGB1P12-201ENST00000438594 MFRPQ9BY79 579 aa8.55□□□□□ -1.04
HMGB1P12-201ENST00000438594 C2orf72A6NCS6 295 aa8.52□□□□□ -1.05
HMGB1P12-201ENST00000438594 NUDT7P0C024 238 aa8.52□□□□□ -1.05
HMGB1P12-201ENST00000438594 PTGER2P43116 358 aa8.51□□□□□ -1.05
HMGB1P12-201ENST00000438594 TMC2Q8TDI7 906 aa8.5□□□□□ -1.05
HMGB1P12-201ENST00000438594 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGB1P12-201ENST00000438594 RGL2O15211 777 aa8.47□□□□□ -1.05
HMGB1P12-201ENST00000438594 KIF3CO14782 793 aa8.46□□□□□ -1.06
HMGB1P12-201ENST00000438594 LHX6Q9UPM6 363 aa8.46□□□□□ -1.06
HMGB1P12-201ENST00000438594 AXIN2Q9Y2T1 843 aa8.46□□□□□ -1.06
HMGB1P12-201ENST00000438594 PCDHGA4Q9Y5G9 962 aa8.46□□□□□ -1.06
HMGB1P12-201ENST00000438594 PBX2P40425 430 aa8.42□□□□□ -1.06
HMGB1P12-201ENST00000438594 PPP1R37O75864 691 aa8.41□□□□□ -1.06
HMGB1P12-201ENST00000438594 PKD2Q13563 968 aa8.41□□□□□ -1.06
HMGB1P12-201ENST00000438594 SLC34A2O95436 690 aa8.39□□□□□ -1.07
HMGB1P12-201ENST00000438594 POTEEQ6S8J3 1075 aa8.38□□□□□ -1.07
HMGB1P12-201ENST00000438594 ARHGAP33O14559 1287 aa8.35□□□□□ -1.07
HMGB1P12-201ENST00000438594 PSDA5PKW4 1024 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P12-201ENST00000438594 ADGRD1Q6QNK2 874 aa8.34□□□□□ -1.07
HMGB1P12-201ENST00000438594 PLPP6Q8IY26 295 aa8.33□□□□□ -1.08
HMGB1P12-201ENST00000438594 STAC3Q96MF2 364 aa8.33□□□□□ -1.08
HMGB1P12-201ENST00000438594 PLA2G2EQ9NZK7 142 aa8.33□□□□□ -1.08
HMGB1P12-201ENST00000438594 HCSTQ9UBK5 93 aa8.33□□□□□ -1.08
HMGB1P12-201ENST00000438594 PSEN2P49810 448 aa8.32□□□□□ -1.08
HMGB1P12-201ENST00000438594 TBC1D12O60347 775 aa8.3□□□□□ -1.08
HMGB1P12-201ENST00000438594 PPP4R3BQ5MIZ7 849 aa8.3□□□□□ -1.08
HMGB1P12-201ENST00000438594 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
HMGB1P12-201ENST00000438594 PTCD2Q8WV60 388 aaKnown RBP8.29□□□□□ -1.08
HMGB1P12-201ENST00000438594 FOXK1P85037 733 aa8.28□□□□□ -1.08
HMGB1P12-201ENST00000438594 DSG2Q14126 1118 aa8.28□□□□□ -1.08
HMGB1P12-201ENST00000438594 KCTD12Q96CX2 325 aaKnown RBP8.28□□□□□ -1.08
HMGB1P12-201ENST00000438594 KCNH8Q96L42 1107 aa8.28□□□□□ -1.08
HMGB1P12-201ENST00000438594 CHGAP10645 457 aaKnown RBP8.27□□□□□ -1.09
HMGB1P12-201ENST00000438594 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P12-201ENST00000438594 UPF1Q92900 1129 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGB1P12-201ENST00000438594 KCNK17Q96T54 332 aa8.26□□□□□ -1.09
HMGB1P12-201ENST00000438594 TK2O00142 265 aa8.25□□□□□ -1.09
HMGB1P12-201ENST00000438594 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
HMGB1P12-201ENST00000438594 KDM4FA0A1W2PPD8 638 aa8.24□□□□□ -1.09
HMGB1P12-201ENST00000438594 HRO43593 1189 aa8.22□□□□□ -1.09
HMGB1P12-201ENST00000438594 PTPN5P54829 565 aa8.21□□□□□ -1.1
HMGB1P12-201ENST00000438594 ZNF454Q8N9F8 522 aa8.21□□□□□ -1.1
HMGB1P12-201ENST00000438594 OXER1Q8TDS5 423 aa8.17□□□□□ -1.1
HMGB1P12-201ENST00000438594 GOLGA8CPA6NN73 597 aa8.16□□□□□ -1.1
HMGB1P12-201ENST00000438594 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
HMGB1P12-201ENST00000438594 RYDENQ9NUL5 291 aaKnown RBP8.16□□□□□ -1.1
HMGB1P12-201ENST00000438594 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
HMGB1P12-201ENST00000438594 NKX1-1Q15270 411 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P12-201ENST00000438594 PTPREP23469 700 aa8.14□□□□□ -1.11
HMGB1P12-201ENST00000438594 CRISPLD2Q9H0B8 497 aa8.12□□□□□ -1.11
HMGB1P12-201ENST00000438594 BCL2L12Q9HB09 334 aa8.12□□□□□ -1.11
HMGB1P12-201ENST00000438594 PDE4AP27815 886 aa8.11□□□□□ -1.11
HMGB1P12-201ENST00000438594 FOSBP53539 338 aa8.1□□□□□ -1.11
HMGB1P12-201ENST00000438594 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
HMGB1P12-201ENST00000438594 WNT2BQ93097 391 aa8.1□□□□□ -1.11
HMGB1P12-201ENST00000438594 EVI5O60447 810 aa8.09□□□□□ -1.11
HMGB1P12-201ENST00000438594 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
HMGB1P12-201ENST00000438594 MAP3K9P80192 1104 aa8.08□□□□□ -1.12
HMGB1P12-201ENST00000438594 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
HMGB1P12-201ENST00000438594 NCKAP5LQ9HCH0 1330 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 DCAF8L2P0C7V8 631 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 ZDHHC16Q969W1 377 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 JPH4Q96JJ6 628 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 ZBED2Q9BTP6 218 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 SLC4A5Q9BY07 1137 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 ADAM33Q9BZ11 813 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 DDX27Q96GQ7 796 aaKnown RBP8.06□□□□□ -1.12
HMGB1P12-201ENST00000438594 NBPF3Q9H094 633 aa8.06□□□□□ -1.12
HMGB1P12-201ENST00000438594 BHMG1C9JSJ3 638 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P12-201ENST00000438594 DNAJC5Q9H3Z4 198 aa8.05□□□□□ -1.12
HMGB1P12-201ENST00000438594 SLC24A1O60721 1099 aa8.02□□□□□ -1.13
HMGB1P12-201ENST00000438594 ANO8Q9HCE9 1232 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P12-201ENST00000438594 GTPBP6O43824 516 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P12-201ENST00000438594 IRX2Q9BZI1 471 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P12-201ENST00000438594 PROX2Q3B8N5 592 aa8□□□□□ -1.13
HMGB1P12-201ENST00000438594 A0A0G2JS52 829 aa7.99□□□□□ -1.13
HMGB1P12-201ENST00000438594 ANKK1Q8NFD2 765 aa7.99□□□□□ -1.13
HMGB1P12-201ENST00000438594 PPP1R3GB7ZBB8 358 aa7.98□□□□□ -1.13
HMGB1P12-201ENST00000438594 RGS20O76081 388 aa7.97□□□□□ -1.13
HMGB1P12-201ENST00000438594 EMILIN3Q9NT22 766 aa7.97□□□□□ -1.13
HMGB1P12-201ENST00000438594 PCDHGA10Q9Y5H3 936 aa7.97□□□□□ -1.13
HMGB1P12-201ENST00000438594 COL9A1P20849 921 aa7.96□□□□□ -1.14
HMGB1P12-201ENST00000438594 BCAMP50895 628 aa7.96□□□□□ -1.14
HMGB1P12-201ENST00000438594 IFFO2Q5TF58 517 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms