RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 RNF166Q96A37 237 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P12-201ENST00000438594 BCL11BQ9C0K0 894 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P12-201ENST00000438594 ZSWIM6Q9HCJ5 1215 aa8.65□□□□□ -1.02
HMGB1P12-201ENST00000438594 STK24Q9Y6E0 443 aa8.65□□□□□ -1.02
HMGB1P12-201ENST00000438594 NLRP6P59044 892 aa8.64□□□□□ -1.03
HMGB1P12-201ENST00000438594 ARSIQ5FYB1 569 aa8.64□□□□□ -1.03
HMGB1P12-201ENST00000438594 TAOK2Q9UL54 1235 aa8.64□□□□□ -1.03
HMGB1P12-201ENST00000438594 GPR153Q6NV75 609 aa8.62□□□□□ -1.03
HMGB1P12-201ENST00000438594 ZNF687Q8N1G0 1237 aa8.62□□□□□ -1.03
HMGB1P12-201ENST00000438594 MYT1LQ9UL68 1186 aa8.61□□□□□ -1.03
HMGB1P12-201ENST00000438594 KHSRPQ92945 711 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGB1P12-201ENST00000438594 STK25O00506 426 aa8.59□□□□□ -1.03
HMGB1P12-201ENST00000438594 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
HMGB1P12-201ENST00000438594 ECM2O94769 699 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P12-201ENST00000438594 FBXO22Q8NEZ5 403 aa8.57□□□□□ -1.04
HMGB1P12-201ENST00000438594 ZNF316A6NFI3 1004 aaPredicted RBP8.55□□□□□ -1.04
HMGB1P12-201ENST00000438594 MFRPQ9BY79 579 aa8.55□□□□□ -1.04
HMGB1P12-201ENST00000438594 C2orf72A6NCS6 295 aa8.52□□□□□ -1.05
HMGB1P12-201ENST00000438594 NUDT7P0C024 238 aa8.52□□□□□ -1.05
HMGB1P12-201ENST00000438594 PTGER2P43116 358 aa8.51□□□□□ -1.05
HMGB1P12-201ENST00000438594 TMC2Q8TDI7 906 aa8.5□□□□□ -1.05
HMGB1P12-201ENST00000438594 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGB1P12-201ENST00000438594 RGL2O15211 777 aa8.47□□□□□ -1.05
HMGB1P12-201ENST00000438594 KIF3CO14782 793 aa8.46□□□□□ -1.06
HMGB1P12-201ENST00000438594 LHX6Q9UPM6 363 aa8.46□□□□□ -1.06
HMGB1P12-201ENST00000438594 AXIN2Q9Y2T1 843 aa8.46□□□□□ -1.06
HMGB1P12-201ENST00000438594 PCDHGA4Q9Y5G9 962 aa8.46□□□□□ -1.06
HMGB1P12-201ENST00000438594 PBX2P40425 430 aa8.42□□□□□ -1.06
HMGB1P12-201ENST00000438594 PPP1R37O75864 691 aa8.41□□□□□ -1.06
HMGB1P12-201ENST00000438594 PKD2Q13563 968 aa8.41□□□□□ -1.06
HMGB1P12-201ENST00000438594 SLC34A2O95436 690 aa8.39□□□□□ -1.07
HMGB1P12-201ENST00000438594 POTEEQ6S8J3 1075 aa8.38□□□□□ -1.07
HMGB1P12-201ENST00000438594 ARHGAP33O14559 1287 aa8.35□□□□□ -1.07
HMGB1P12-201ENST00000438594 PSDA5PKW4 1024 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P12-201ENST00000438594 ADGRD1Q6QNK2 874 aa8.34□□□□□ -1.07
HMGB1P12-201ENST00000438594 PLPP6Q8IY26 295 aa8.33□□□□□ -1.08
HMGB1P12-201ENST00000438594 STAC3Q96MF2 364 aa8.33□□□□□ -1.08
HMGB1P12-201ENST00000438594 PLA2G2EQ9NZK7 142 aa8.33□□□□□ -1.08
HMGB1P12-201ENST00000438594 HCSTQ9UBK5 93 aa8.33□□□□□ -1.08
HMGB1P12-201ENST00000438594 PSEN2P49810 448 aa8.32□□□□□ -1.08
HMGB1P12-201ENST00000438594 TBC1D12O60347 775 aa8.3□□□□□ -1.08
HMGB1P12-201ENST00000438594 PPP4R3BQ5MIZ7 849 aa8.3□□□□□ -1.08
HMGB1P12-201ENST00000438594 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
HMGB1P12-201ENST00000438594 PTCD2Q8WV60 388 aaKnown RBP8.29□□□□□ -1.08
HMGB1P12-201ENST00000438594 FOXK1P85037 733 aa8.28□□□□□ -1.08
HMGB1P12-201ENST00000438594 DSG2Q14126 1118 aa8.28□□□□□ -1.08
HMGB1P12-201ENST00000438594 KCTD12Q96CX2 325 aaKnown RBP8.28□□□□□ -1.08
HMGB1P12-201ENST00000438594 KCNH8Q96L42 1107 aa8.28□□□□□ -1.08
HMGB1P12-201ENST00000438594 CHGAP10645 457 aaKnown RBP8.27□□□□□ -1.09
HMGB1P12-201ENST00000438594 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P12-201ENST00000438594 UPF1Q92900 1129 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGB1P12-201ENST00000438594 KCNK17Q96T54 332 aa8.26□□□□□ -1.09
HMGB1P12-201ENST00000438594 TK2O00142 265 aa8.25□□□□□ -1.09
HMGB1P12-201ENST00000438594 HS6ST3Q8IZP7 471 aa8.25□□□□□ -1.09
HMGB1P12-201ENST00000438594 KDM4FA0A1W2PPD8 638 aa8.24□□□□□ -1.09
HMGB1P12-201ENST00000438594 HRO43593 1189 aa8.22□□□□□ -1.09
HMGB1P12-201ENST00000438594 PTPN5P54829 565 aa8.21□□□□□ -1.1
HMGB1P12-201ENST00000438594 ZNF454Q8N9F8 522 aa8.21□□□□□ -1.1
HMGB1P12-201ENST00000438594 OXER1Q8TDS5 423 aa8.17□□□□□ -1.1
HMGB1P12-201ENST00000438594 GOLGA8CPA6NN73 597 aa8.16□□□□□ -1.1
HMGB1P12-201ENST00000438594 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
HMGB1P12-201ENST00000438594 RYDENQ9NUL5 291 aaKnown RBP8.16□□□□□ -1.1
HMGB1P12-201ENST00000438594 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
HMGB1P12-201ENST00000438594 NKX1-1Q15270 411 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P12-201ENST00000438594 PTPREP23469 700 aa8.14□□□□□ -1.11
HMGB1P12-201ENST00000438594 CRISPLD2Q9H0B8 497 aa8.12□□□□□ -1.11
HMGB1P12-201ENST00000438594 BCL2L12Q9HB09 334 aa8.12□□□□□ -1.11
HMGB1P12-201ENST00000438594 PDE4AP27815 886 aa8.11□□□□□ -1.11
HMGB1P12-201ENST00000438594 FOSBP53539 338 aa8.1□□□□□ -1.11
HMGB1P12-201ENST00000438594 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
HMGB1P12-201ENST00000438594 WNT2BQ93097 391 aa8.1□□□□□ -1.11
HMGB1P12-201ENST00000438594 EVI5O60447 810 aa8.09□□□□□ -1.11
HMGB1P12-201ENST00000438594 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
HMGB1P12-201ENST00000438594 MAP3K9P80192 1104 aa8.08□□□□□ -1.12
HMGB1P12-201ENST00000438594 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
HMGB1P12-201ENST00000438594 NCKAP5LQ9HCH0 1330 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 DCAF8L2P0C7V8 631 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 ZDHHC16Q969W1 377 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 JPH4Q96JJ6 628 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 ZBED2Q9BTP6 218 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 SLC4A5Q9BY07 1137 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 ADAM33Q9BZ11 813 aa8.07□□□□□ -1.12
HMGB1P12-201ENST00000438594 DDX27Q96GQ7 796 aaKnown RBP8.06□□□□□ -1.12
HMGB1P12-201ENST00000438594 NBPF3Q9H094 633 aa8.06□□□□□ -1.12
HMGB1P12-201ENST00000438594 BHMG1C9JSJ3 638 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P12-201ENST00000438594 DNAJC5Q9H3Z4 198 aa8.05□□□□□ -1.12
HMGB1P12-201ENST00000438594 SLC24A1O60721 1099 aa8.02□□□□□ -1.13
HMGB1P12-201ENST00000438594 ANO8Q9HCE9 1232 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P12-201ENST00000438594 GTPBP6O43824 516 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P12-201ENST00000438594 IRX2Q9BZI1 471 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P12-201ENST00000438594 PROX2Q3B8N5 592 aa8□□□□□ -1.13
HMGB1P12-201ENST00000438594 A0A0G2JS52 829 aa7.99□□□□□ -1.13
HMGB1P12-201ENST00000438594 ANKK1Q8NFD2 765 aa7.99□□□□□ -1.13
HMGB1P12-201ENST00000438594 PPP1R3GB7ZBB8 358 aa7.98□□□□□ -1.13
HMGB1P12-201ENST00000438594 RGS20O76081 388 aa7.97□□□□□ -1.13
HMGB1P12-201ENST00000438594 EMILIN3Q9NT22 766 aa7.97□□□□□ -1.13
HMGB1P12-201ENST00000438594 PCDHGA10Q9Y5H3 936 aa7.97□□□□□ -1.13
HMGB1P12-201ENST00000438594 COL9A1P20849 921 aa7.96□□□□□ -1.14
HMGB1P12-201ENST00000438594 BCAMP50895 628 aa7.96□□□□□ -1.14
HMGB1P12-201ENST00000438594 IFFO2Q5TF58 517 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms