RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 BCANQ96GW7 911 aa26.92■■□□□ 1.9
FAM239A-202ENST00000438107 GRIN2AQ12879 1464 aa26.9■■□□□ 1.9
FAM239A-202ENST00000438107 NUP153P49790 1475 aaKnown RBP26.89■■□□□ 1.89
FAM239A-202ENST00000438107 RPRD2Q5VT52 1461 aaKnown RBP26.89■■□□□ 1.89
FAM239A-202ENST00000438107 ABCC5O15440 1437 aa26.88■■□□□ 1.89
FAM239A-202ENST00000438107 CNTLNQ9NXG0 1405 aa26.88■■□□□ 1.89
FAM239A-202ENST00000438107 ANKRD30BQ9BXX2 1392 aa26.87■■□□□ 1.89
FAM239A-202ENST00000438107 POLR1AO95602 1720 aaPredicted RBP26.86■■□□□ 1.89
FAM239A-202ENST00000438107 L3MBTL2Q969R5 705 aa26.85■■□□□ 1.89
FAM239A-202ENST00000438107 NCOA1Q15788 1441 aa26.84■■□□□ 1.89
FAM239A-202ENST00000438107 TEX14Q8IWB6 1497 aa26.83■■□□□ 1.89
FAM239A-202ENST00000438107 ITSN2Q9NZM3 1697 aa26.82■■□□□ 1.88
FAM239A-202ENST00000438107 CDK11AQ9UQ88 783 aaPredicted RBP26.82■■□□□ 1.88
FAM239A-202ENST00000438107 ADGBQ8N7X0 1667 aa26.8■■□□□ 1.88
FAM239A-202ENST00000438107 MAGI1Q96QZ7 1491 aaPredicted RBP26.8■■□□□ 1.88
FAM239A-202ENST00000438107 ARID3CA6NKF2 412 aa26.8■■□□□ 1.88
FAM239A-202ENST00000438107 CCDC7Q96M83 1385 aa26.78■■□□□ 1.88
FAM239A-202ENST00000438107 ADCY10Q96PN6 1610 aa26.77■■□□□ 1.88
FAM239A-202ENST00000438107 HNRNPUQ00839 825 aaKnown RBP eCLIP26.77■■□□□ 1.88
FAM239A-202ENST00000438107 TROQ12816 1431 aaPredicted RBP26.75■■□□□ 1.87
FAM239A-202ENST00000438107 FOXD1Q16676 465 aa26.73■■□□□ 1.87
FAM239A-202ENST00000438107 CHMP7Q8WUX9 453 aaPredicted RBP26.73■■□□□ 1.87
FAM239A-202ENST00000438107 CROCC2H7BZ55 1655 aa26.73■■□□□ 1.87
FAM239A-202ENST00000438107 SYNJ2O15056 1496 aa26.72■■□□□ 1.87
FAM239A-202ENST00000438107 CEP170Q5SW79 1584 aa26.72■■□□□ 1.87
FAM239A-202ENST00000438107 CAMSAP2Q08AD1 1489 aa26.72■■□□□ 1.87
FAM239A-202ENST00000438107 SPATA31E1Q6ZUB1 1445 aa26.72■■□□□ 1.87
FAM239A-202ENST00000438107 ADGRL2O95490 1459 aa26.7■■□□□ 1.86
FAM239A-202ENST00000438107 ZNF644Q9H582 1327 aaPredicted RBP26.7■■□□□ 1.86
FAM239A-202ENST00000438107 PZPP20742 1482 aa26.69■■□□□ 1.86
FAM239A-202ENST00000438107 NBPF8Q3BBV2 869 aa26.69■■□□□ 1.86
FAM239A-202ENST00000438107 SLC4A1APQ9BWU0 796 aaKnown RBP26.69■■□□□ 1.86
FAM239A-202ENST00000438107 FBLN2P98095 1184 aa26.68■■□□□ 1.86
FAM239A-202ENST00000438107 C11orf95C9JLR9 678 aaPredicted RBP26.67■■□□□ 1.86
FAM239A-202ENST00000438107 PRKRIP1Q9H875 184 aaPredicted RBP26.67■■□□□ 1.86
FAM239A-202ENST00000438107 ERICH6BQ5W0A0 696 aa26.65■■□□□ 1.86
FAM239A-202ENST00000438107 ANP32EQ9BTT0 268 aa26.65■■□□□ 1.86
FAM239A-202ENST00000438107 GPATCH8Q9UKJ3 1502 aaKnown RBP26.65■■□□□ 1.86
FAM239A-202ENST00000438107 PRG4Q92954 1404 aaPredicted RBP26.65■■□□□ 1.86
FAM239A-202ENST00000438107 MBD5Q9P267 1494 aa26.63■■□□□ 1.85
FAM239A-202ENST00000438107 NUP160Q12769 1436 aa26.61■■□□□ 1.85
FAM239A-202ENST00000438107 KIF14Q15058 1648 aa26.61■■□□□ 1.85
FAM239A-202ENST00000438107 CFDP1Q9UEE9 299 aaPredicted RBP26.61■■□□□ 1.85
FAM239A-202ENST00000438107 RBM19Q9Y4C8 960 aaKnown RBP26.61■■□□□ 1.85
FAM239A-202ENST00000438107 PLB1Q6P1J6 1458 aa26.6■■□□□ 1.85
FAM239A-202ENST00000438107 KIAA1107Q9UPP5 1409 aa26.6■■□□□ 1.85
FAM239A-202ENST00000438107 KIF7Q2M1P5 1343 aa26.59■■□□□ 1.85
FAM239A-202ENST00000438107 CARMIL2Q6F5E8 1435 aa26.58■■□□□ 1.85
FAM239A-202ENST00000438107 CCDC184Q52MB2 194 aa26.56■■□□□ 1.84
FAM239A-202ENST00000438107 ANKRD30AQ9BXX3 1397 aa26.55■■□□□ 1.84
FAM239A-202ENST00000438107 ZBED9Q6R2W3 1325 aa26.54■■□□□ 1.84
FAM239A-202ENST00000438107 JPH4Q96JJ6 628 aa26.53■■□□□ 1.84
FAM239A-202ENST00000438107 MRS2Q9HD23 443 aa26.53■■□□□ 1.84
FAM239A-202ENST00000438107 SHANK2Q9UPX8 1470 aa26.52■■□□□ 1.84
FAM239A-202ENST00000438107 CDC42BPAQ5VT25 1732 aa26.52■■□□□ 1.84
FAM239A-202ENST00000438107 KDM5CP41229 1560 aa26.48■■□□□ 1.83
FAM239A-202ENST00000438107 ARID4BQ4LE39 1312 aaPredicted RBP26.48■■□□□ 1.83
FAM239A-202ENST00000438107 ABCA8O94911 1581 aa26.48■■□□□ 1.83
FAM239A-202ENST00000438107 BCORL1Q5H9F3 1711 aa26.47■■□□□ 1.83
FAM239A-202ENST00000438107 ANKRD50Q9ULJ7 1429 aa26.47■■□□□ 1.83
FAM239A-202ENST00000438107 KDM5DQ9BY66 1539 aa26.46■■□□□ 1.83
FAM239A-202ENST00000438107 UHRF1BP1Q6BDS2 1440 aa26.46■■□□□ 1.83
FAM239A-202ENST00000438107 FAM9BQ8IZU0 186 aa26.46■■□□□ 1.83
FAM239A-202ENST00000438107 ABCC10Q5T3U5 1492 aa26.45■■□□□ 1.82
FAM239A-202ENST00000438107 PPP4R2Q9NY27 417 aa26.44■■□□□ 1.82
FAM239A-202ENST00000438107 USP47Q96K76 1375 aa26.44■■□□□ 1.82
FAM239A-202ENST00000438107 ARHGEF12Q9NZN5 1544 aa26.43■■□□□ 1.82
FAM239A-202ENST00000438107 DHX29Q7Z478 1369 aaKnown RBP26.43■■□□□ 1.82
FAM239A-202ENST00000438107 PKD2Q13563 968 aa26.43■■□□□ 1.82
FAM239A-202ENST00000438107 ZNF777Q9ULD5 760 aaPredicted RBP26.42■■□□□ 1.82
FAM239A-202ENST00000438107 RALGAPBQ86X10 1494 aa26.41■■□□□ 1.82
FAM239A-202ENST00000438107 IRX6P78412 446 aaPredicted RBP26.4■■□□□ 1.82
FAM239A-202ENST00000438107 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
FAM239A-202ENST00000438107 PLEKHD1A6NEE1 506 aa26.38■■□□□ 1.81
FAM239A-202ENST00000438107 ARHGEF5Q12774 1597 aa26.38■■□□□ 1.81
FAM239A-202ENST00000438107 ATP10BO94823 1461 aa26.37■■□□□ 1.81
FAM239A-202ENST00000438107 ROCK2O75116 1388 aaKnown RBP26.37■■□□□ 1.81
FAM239A-202ENST00000438107 FANCIQ9NVI1 1328 aa26.34■■□□□ 1.81
FAM239A-202ENST00000438107 PTPRGP23470 1445 aa26.33■■□□□ 1.81
FAM239A-202ENST00000438107 NUP155O75694 1391 aa26.33■■□□□ 1.8
FAM239A-202ENST00000438107 SMG6Q86US8 1419 aaKnown RBP26.31■■□□□ 1.8
FAM239A-202ENST00000438107 CHD1O14646 1710 aa26.27■■□□□ 1.8
FAM239A-202ENST00000438107 TSPY4P0CV99 314 aa26.27■■□□□ 1.8
FAM239A-202ENST00000438107 TSPY10P0CW01 314 aa26.27■■□□□ 1.8
FAM239A-202ENST00000438107 ZNF326Q5BKZ1 582 aaKnown RBP26.26■■□□□ 1.79
FAM239A-202ENST00000438107 KIF15Q9NS87 1388 aa26.24■■□□□ 1.79
FAM239A-202ENST00000438107 PREX2Q70Z35 1606 aa26.24■■□□□ 1.79
FAM239A-202ENST00000438107 E9PCH4 1651 aa26.22■■□□□ 1.79
FAM239A-202ENST00000438107 CDC42BPBQ9Y5S2 1711 aa26.22■■□□□ 1.79
FAM239A-202ENST00000438107 KTN1Q86UP2 1357 aaKnown RBP26.22■■□□□ 1.79
FAM239A-202ENST00000438107 CARD11Q9BXL7 1154 aa26.21■■□□□ 1.79
FAM239A-202ENST00000438107 CCDC141Q6ZP82 1450 aa26.21■■□□□ 1.79
FAM239A-202ENST00000438107 SAMD9LQ8IVG5 1584 aa26.2■■□□□ 1.78
FAM239A-202ENST00000438107 NUDCQ9Y266 331 aa26.19■■□□□ 1.78
FAM239A-202ENST00000438107 RNF123Q5XPI4 1314 aa26.18■■□□□ 1.78
FAM239A-202ENST00000438107 MSH5O43196 834 aa26.17■■□□□ 1.78
FAM239A-202ENST00000438107 RSPH4AQ5TD94 716 aa26.17■■□□□ 1.78
FAM239A-202ENST00000438107 POLR3GLQ9BT43 218 aa26.17■■□□□ 1.78
FAM239A-202ENST00000438107 FAM135AQ9P2D6 1515 aa26.17■■□□□ 1.78
FAM239A-202ENST00000438107 MAST1Q9Y2H9 1570 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms