RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 GCC2Q8IWJ2 1684 aa22.57■■□□□ 1.2
SGCE-205ENST00000437425 CDC42BPAQ5VT25 1732 aa22.56■■□□□ 1.2
SGCE-205ENST00000437425 ABCC5O15440 1437 aa22.55■■□□□ 1.2
SGCE-205ENST00000437425 RIMBP3CA6NJZ7 1639 aa22.54■■□□□ 1.2
SGCE-205ENST00000437425 RIMBP3BA6NNM3 1639 aa22.54■■□□□ 1.2
SGCE-205ENST00000437425 ZCCHC11Q5TAX3 1644 aaKnown RBP22.54■■□□□ 1.2
SGCE-205ENST00000437425 RIMBP3Q9UFD9 1639 aa22.54■■□□□ 1.2
SGCE-205ENST00000437425 PREX2Q70Z35 1606 aa22.5■■□□□ 1.19
SGCE-205ENST00000437425 RSPH4AQ5TD94 716 aa22.49■■□□□ 1.19
SGCE-205ENST00000437425 SHANK2Q9UPX8 1470 aa22.48■■□□□ 1.19
SGCE-205ENST00000437425 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
SGCE-205ENST00000437425 ZNF644Q9H582 1327 aaPredicted RBP22.48■■□□□ 1.19
SGCE-205ENST00000437425 ADGRL2O95490 1459 aa22.48■■□□□ 1.19
SGCE-205ENST00000437425 CROCC2H7BZ55 1655 aa22.46■■□□□ 1.19
SGCE-205ENST00000437425 ADGBQ8N7X0 1667 aa22.46■■□□□ 1.19
SGCE-205ENST00000437425 ARHGEF5Q12774 1597 aa22.46■■□□□ 1.19
SGCE-205ENST00000437425 TIMELESSQ9UNS1 1208 aa22.46■■□□□ 1.19
SGCE-205ENST00000437425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.45■■□□□ 1.18
SGCE-205ENST00000437425 CHIC2Q9UKJ5 165 aa22.45■■□□□ 1.18
SGCE-205ENST00000437425 PLEKHH2Q8IVE3 1493 aa22.45■■□□□ 1.18
SGCE-205ENST00000437425 ZNF777Q9ULD5 760 aaPredicted RBP22.44■■□□□ 1.18
SGCE-205ENST00000437425 RRP7BPQ9NSQ0 103 aa22.43■■□□□ 1.18
SGCE-205ENST00000437425 MYO5CQ9NQX4 1742 aa22.43■■□□□ 1.18
SGCE-205ENST00000437425 ANKRD30AQ9BXX3 1397 aa22.42■■□□□ 1.18
SGCE-205ENST00000437425 CDC42BPBQ9Y5S2 1711 aa22.41■■□□□ 1.18
SGCE-205ENST00000437425 TTC37Q6PGP7 1564 aa22.4■■□□□ 1.18
SGCE-205ENST00000437425 NCOA1Q15788 1441 aa22.4■■□□□ 1.18
SGCE-205ENST00000437425 ARAP3Q8WWN8 1544 aa22.4■■□□□ 1.18
SGCE-205ENST00000437425 TSPY4P0CV99 314 aa22.39■■□□□ 1.17
SGCE-205ENST00000437425 TSPY10P0CW01 314 aa22.39■■□□□ 1.17
SGCE-205ENST00000437425 CYB5RLQ6IPT4 315 aa22.39■■□□□ 1.17
SGCE-205ENST00000437425 KIAA1107Q9UPP5 1409 aa22.39■■□□□ 1.17
SGCE-205ENST00000437425 WDR7Q9Y4E6 1490 aa22.39■■□□□ 1.17
SGCE-205ENST00000437425 ARHGAP5Q13017 1502 aa22.38■■□□□ 1.17
SGCE-205ENST00000437425 PLCH2O75038 1416 aa22.38■■□□□ 1.17
SGCE-205ENST00000437425 SAMD9LQ8IVG5 1584 aa22.36■■□□□ 1.17
SGCE-205ENST00000437425 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
SGCE-205ENST00000437425 MBD5Q9P267 1494 aa22.35■■□□□ 1.17
SGCE-205ENST00000437425 C9orf84Q5VXU9 1444 aa22.35■■□□□ 1.17
SGCE-205ENST00000437425 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
SGCE-205ENST00000437425 KCNH8Q96L42 1107 aa22.33■■□□□ 1.17
SGCE-205ENST00000437425 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
SGCE-205ENST00000437425 MAST1Q9Y2H9 1570 aa22.31■■□□□ 1.16
SGCE-205ENST00000437425 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
SGCE-205ENST00000437425 ZNF316A6NFI3 1004 aaPredicted RBP22.29■■□□□ 1.16
SGCE-205ENST00000437425 KDM6BO15054 1643 aa22.28■■□□□ 1.16
SGCE-205ENST00000437425 HNRNPMP52272 730 aaKnown RBP eCLIP22.27■■□□□ 1.165e-8■■■■■ 27.1
SGCE-205ENST00000437425 ABCA9Q8IUA7 1624 aa22.27■■□□□ 1.16
SGCE-205ENST00000437425 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
SGCE-205ENST00000437425 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
SGCE-205ENST00000437425 ANKRD50Q9ULJ7 1429 aa22.26■■□□□ 1.15
SGCE-205ENST00000437425 SYCP2Q9BX26 1530 aa22.26■■□□□ 1.15
SGCE-205ENST00000437425 MPHOSPH9Q99550 1183 aa22.25■■□□□ 1.15
SGCE-205ENST00000437425 ABCC1P33527 1531 aa22.22■■□□□ 1.15
SGCE-205ENST00000437425 KIF15Q9NS87 1388 aa22.21■■□□□ 1.15
SGCE-205ENST00000437425 PLXNC1O60486 1568 aa22.2■■□□□ 1.14
SGCE-205ENST00000437425 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
SGCE-205ENST00000437425 SIN3AQ96ST3 1273 aa22.19■■□□□ 1.14
SGCE-205ENST00000437425 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
SGCE-205ENST00000437425 KDM5DQ9BY66 1539 aa22.17■■□□□ 1.14
SGCE-205ENST00000437425 DENND4BO75064 1496 aaPredicted RBP22.16■■□□□ 1.14
SGCE-205ENST00000437425 SLC4A1APQ9BWU0 796 aaKnown RBP22.16■■□□□ 1.14
SGCE-205ENST00000437425 FANCAO15360 1455 aa22.14■■□□□ 1.14
SGCE-205ENST00000437425 RTEL1-TNFRSF6BF6WH68 1400 aa22.14■■□□□ 1.14
SGCE-205ENST00000437425 ARHGEF12Q9NZN5 1544 aa22.13■■□□□ 1.13
SGCE-205ENST00000437425 CFAP74Q9C0B2 1584 aa22.13■■□□□ 1.13
SGCE-205ENST00000437425 PZPP20742 1482 aa22.12■■□□□ 1.13
SGCE-205ENST00000437425 DUOX2Q9NRD8 1548 aa22.12■■□□□ 1.13
SGCE-205ENST00000437425 PPP1R15AO75807 674 aaPredicted RBP22.11■■□□□ 1.13
SGCE-205ENST00000437425 ANKRD30BQ9BXX2 1392 aa22.1■■□□□ 1.13
SGCE-205ENST00000437425 ERBINQ96RT1 1412 aa22.09■■□□□ 1.13
SGCE-205ENST00000437425 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.13
SGCE-205ENST00000437425 NUP155O75694 1391 aa22.07■■□□□ 1.12
SGCE-205ENST00000437425 TRAPPC8Q9Y2L5 1435 aa22.06■■□□□ 1.12
SGCE-205ENST00000437425 SPAG9O60271 1321 aaKnown RBP22.05■■□□□ 1.12
SGCE-205ENST00000437425 ADGRL1O94910 1474 aa22.05■■□□□ 1.12
SGCE-205ENST00000437425 RPRD2Q5VT52 1461 aaKnown RBP22.05■■□□□ 1.12
SGCE-205ENST00000437425 CD109Q6YHK3 1445 aa22.05■■□□□ 1.12
SGCE-205ENST00000437425 UNC13BO14795 1591 aa22.04■■□□□ 1.12
SGCE-205ENST00000437425 ZFYVE16Q7Z3T8 1539 aa22.01■■□□□ 1.11
SGCE-205ENST00000437425 SCAPERQ9BY12 1400 aa22.01■■□□□ 1.11
SGCE-205ENST00000437425 PKD2Q13563 968 aa21.99■■□□□ 1.11
SGCE-205ENST00000437425 ZNF518AQ6AHZ1 1483 aa21.98■■□□□ 1.11
SGCE-205ENST00000437425 NEO1Q92859 1461 aa21.98■■□□□ 1.11
SGCE-205ENST00000437425 INO80Q9ULG1 1556 aaPredicted RBP21.98■■□□□ 1.11
SGCE-205ENST00000437425 MAGI2Q86UL8 1455 aa21.98■■□□□ 1.11
SGCE-205ENST00000437425 GLI2P10070 1586 aa21.98■■□□□ 1.11
SGCE-205ENST00000437425 ATP7AQ04656 1500 aa21.97■■□□□ 1.11
SGCE-205ENST00000437425 FAM135AQ9P2D6 1515 aa21.97■■□□□ 1.11
SGCE-205ENST00000437425 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
SGCE-205ENST00000437425 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
SGCE-205ENST00000437425 FOXD1Q16676 465 aa21.94■■□□□ 1.1
SGCE-205ENST00000437425 EIF2AK4Q9P2K8 1649 aaKnown RBP21.9■■□□□ 1.1
SGCE-205ENST00000437425 MAP3K4Q9Y6R4 1608 aa21.9■■□□□ 1.1
SGCE-205ENST00000437425 POGZQ7Z3K3 1410 aa21.9■■□□□ 1.1
SGCE-205ENST00000437425 TEX14Q8IWB6 1497 aa21.89■■□□□ 1.09
SGCE-205ENST00000437425 KDM5CP41229 1560 aa21.89■■□□□ 1.09
SGCE-205ENST00000437425 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
SGCE-205ENST00000437425 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
SGCE-205ENST00000437425 DHX29Q7Z478 1369 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms