RNA–Protein interactions for RNA: ENST00000435815.1

SNRPEP4-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 4, humanhuman

BASIC

Gene SNRPEP4, Length 279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP4-201ENST00000435815 RIOK3O14730 519 aaKnown RBP9.48□□□□□ -0.89
SNRPEP4-201ENST00000435815 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
SNRPEP4-201ENST00000435815 KHSRPQ92945 711 aaKnown RBP eCLIP9.48□□□□□ -0.89
SNRPEP4-201ENST00000435815 ARSIQ5FYB1 569 aa9.47□□□□□ -0.89
SNRPEP4-201ENST00000435815 SOX12O15370 315 aa9.46□□□□□ -0.9
SNRPEP4-201ENST00000435815 ZSWIM6Q9HCJ5 1215 aa9.46□□□□□ -0.9
SNRPEP4-201ENST00000435815 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
SNRPEP4-201ENST00000435815 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
SNRPEP4-201ENST00000435815 ZNF316A6NFI3 1004 aaPredicted RBP9.38□□□□□ -0.91
SNRPEP4-201ENST00000435815 FBXO22Q8NEZ5 403 aa9.38□□□□□ -0.91
SNRPEP4-201ENST00000435815 BCL11BQ9C0K0 894 aaPredicted RBP9.36□□□□□ -0.91
SNRPEP4-201ENST00000435815 NLRP6P59044 892 aa9.34□□□□□ -0.91
SNRPEP4-201ENST00000435815 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNRPEP4-201ENST00000435815 NUDT7P0C024 238 aa9.33□□□□□ -0.92
SNRPEP4-201ENST00000435815 PTGER2P43116 358 aa9.33□□□□□ -0.92
SNRPEP4-201ENST00000435815 MFRPQ9BY79 579 aa9.33□□□□□ -0.92
SNRPEP4-201ENST00000435815 C2orf72A6NCS6 295 aa9.32□□□□□ -0.92
SNRPEP4-201ENST00000435815 STK24Q9Y6E0 443 aa9.32□□□□□ -0.92
SNRPEP4-201ENST00000435815 POTEEQ6S8J3 1075 aa9.31□□□□□ -0.92
SNRPEP4-201ENST00000435815 AXIN2Q9Y2T1 843 aa9.31□□□□□ -0.92
SNRPEP4-201ENST00000435815 KIF3CO14782 793 aa9.3□□□□□ -0.92
SNRPEP4-201ENST00000435815 LHX6Q9UPM6 363 aa9.28□□□□□ -0.92
SNRPEP4-201ENST00000435815 STK25O00506 426 aa9.25□□□□□ -0.93
SNRPEP4-201ENST00000435815 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
SNRPEP4-201ENST00000435815 PBX2P40425 430 aa9.21□□□□□ -0.94
SNRPEP4-201ENST00000435815 PPP1R37O75864 691 aa9.18□□□□□ -0.94
SNRPEP4-201ENST00000435815 ECM2O94769 699 aaPredicted RBP9.18□□□□□ -0.94
SNRPEP4-201ENST00000435815 SLC34A2O95436 690 aa9.18□□□□□ -0.94
SNRPEP4-201ENST00000435815 TMC2Q8TDI7 906 aa9.18□□□□□ -0.94
SNRPEP4-201ENST00000435815 PLA2G2EQ9NZK7 142 aa9.18□□□□□ -0.94
SNRPEP4-201ENST00000435815 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
SNRPEP4-201ENST00000435815 RGL2O15211 777 aa9.16□□□□□ -0.94
SNRPEP4-201ENST00000435815 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
SNRPEP4-201ENST00000435815 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
SNRPEP4-201ENST00000435815 ARHGAP33O14559 1287 aa9.13□□□□□ -0.95
SNRPEP4-201ENST00000435815 PSEN2P49810 448 aa9.13□□□□□ -0.95
SNRPEP4-201ENST00000435815 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
SNRPEP4-201ENST00000435815 KDM4FA0A1W2PPD8 638 aa9.11□□□□□ -0.95
SNRPEP4-201ENST00000435815 HRO43593 1189 aa9.09□□□□□ -0.95
SNRPEP4-201ENST00000435815 PKD2Q13563 968 aa9.09□□□□□ -0.95
SNRPEP4-201ENST00000435815 PTCD2Q8WV60 388 aaKnown RBP9.06□□□□□ -0.96
SNRPEP4-201ENST00000435815 KCTD12Q96CX2 325 aaKnown RBP9.06□□□□□ -0.96
SNRPEP4-201ENST00000435815 PSDA5PKW4 1024 aaPredicted RBP9.05□□□□□ -0.96
SNRPEP4-201ENST00000435815 PLPP6Q8IY26 295 aa9.05□□□□□ -0.96
SNRPEP4-201ENST00000435815 TK2O00142 265 aa9.04□□□□□ -0.96
SNRPEP4-201ENST00000435815 DSG2Q14126 1118 aa9.02□□□□□ -0.97
SNRPEP4-201ENST00000435815 PPP4R3BQ5MIZ7 849 aa9.02□□□□□ -0.97
SNRPEP4-201ENST00000435815 KCNK17Q96T54 332 aa9.02□□□□□ -0.97
SNRPEP4-201ENST00000435815 FOXK1P85037 733 aa9.01□□□□□ -0.97
SNRPEP4-201ENST00000435815 GPHNQ9NQX3 736 aaPredicted RBP8.99□□□□□ -0.97
SNRPEP4-201ENST00000435815 PTPN5P54829 565 aa8.96□□□□□ -0.98
SNRPEP4-201ENST00000435815 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
SNRPEP4-201ENST00000435815 STAC3Q96MF2 364 aa8.95□□□□□ -0.98
SNRPEP4-201ENST00000435815 VPS9D1Q9Y2B5 631 aa8.95□□□□□ -0.98
SNRPEP4-201ENST00000435815 TBC1D12O60347 775 aa8.93□□□□□ -0.98
SNRPEP4-201ENST00000435815 ZNF454Q8N9F8 522 aa8.92□□□□□ -0.98
SNRPEP4-201ENST00000435815 OXER1Q8TDS5 423 aa8.91□□□□□ -0.98
SNRPEP4-201ENST00000435815 HS6ST3Q8IZP7 471 aa8.9□□□□□ -0.98
SNRPEP4-201ENST00000435815 KCNH8Q96L42 1107 aa8.9□□□□□ -0.98
SNRPEP4-201ENST00000435815 THSD4Q6ZMP0 1018 aa8.87□□□□□ -0.99
SNRPEP4-201ENST00000435815 BCL2L12Q9HB09 334 aa8.87□□□□□ -0.99
SNRPEP4-201ENST00000435815 NKX1-1Q15270 411 aaPredicted RBP8.86□□□□□ -0.99
SNRPEP4-201ENST00000435815 BHMG1C9JSJ3 638 aaPredicted RBP8.85□□□□□ -0.99
SNRPEP4-201ENST00000435815 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
SNRPEP4-201ENST00000435815 FOSBP53539 338 aa8.85□□□□□ -0.99
SNRPEP4-201ENST00000435815 ZBED2Q9BTP6 218 aa8.85□□□□□ -0.99
SNRPEP4-201ENST00000435815 PPP1R15BQ5SWA1 713 aa8.84□□□□□ -0.99
SNRPEP4-201ENST00000435815 CRISPLD2Q9H0B8 497 aa8.84□□□□□ -0.99
SNRPEP4-201ENST00000435815 PTPREP23469 700 aa8.83□□□□□ -1
SNRPEP4-201ENST00000435815 WNT2BQ93097 391 aa8.83□□□□□ -1
SNRPEP4-201ENST00000435815 SLC4A5Q9BY07 1137 aa8.83□□□□□ -1
SNRPEP4-201ENST00000435815 A0A0G2JS52 829 aa8.82□□□□□ -1
SNRPEP4-201ENST00000435815 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
SNRPEP4-201ENST00000435815 MRPL50Q8N5N7 158 aaKnown RBP8.81□□□□□ -1
SNRPEP4-201ENST00000435815 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
SNRPEP4-201ENST00000435815 IRX2Q9BZI1 471 aaPredicted RBP8.81□□□□□ -1
SNRPEP4-201ENST00000435815 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
SNRPEP4-201ENST00000435815 IFFO2Q5TF58 517 aa8.79□□□□□ -1
SNRPEP4-201ENST00000435815 JPH4Q96JJ6 628 aa8.79□□□□□ -1
SNRPEP4-201ENST00000435815 EVI5O60447 810 aa8.78□□□□□ -1
SNRPEP4-201ENST00000435815 RGS20O76081 388 aa8.76□□□□□ -1.01
SNRPEP4-201ENST00000435815 ZDHHC16Q969W1 377 aa8.76□□□□□ -1.01
SNRPEP4-201ENST00000435815 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
SNRPEP4-201ENST00000435815 PROX2Q3B8N5 592 aa8.75□□□□□ -1.01
SNRPEP4-201ENST00000435815 NBPF3Q9H094 633 aa8.74□□□□□ -1.01
SNRPEP4-201ENST00000435815 COL9A1P20849 921 aa8.72□□□□□ -1.01
SNRPEP4-201ENST00000435815 BCAMP50895 628 aa8.72□□□□□ -1.01
SNRPEP4-201ENST00000435815 DNAJC5Q9H3Z4 198 aa8.72□□□□□ -1.01
SNRPEP4-201ENST00000435815 PDE4AP27815 886 aa8.71□□□□□ -1.02
SNRPEP4-201ENST00000435815 LARP6Q9BRS8 491 aaKnown RBP8.71□□□□□ -1.02
SNRPEP4-201ENST00000435815 PPP1R3GB7ZBB8 358 aa8.7□□□□□ -1.02
SNRPEP4-201ENST00000435815 EMILIN3Q9NT22 766 aa8.69□□□□□ -1.02
SNRPEP4-201ENST00000435815 PCDHGA10Q9Y5H3 936 aa8.69□□□□□ -1.02
SNRPEP4-201ENST00000435815 MAP3K9P80192 1104 aa8.68□□□□□ -1.02
SNRPEP4-201ENST00000435815 ANKK1Q8NFD2 765 aa8.68□□□□□ -1.02
SNRPEP4-201ENST00000435815 DDX27Q96GQ7 796 aaKnown RBP8.68□□□□□ -1.02
SNRPEP4-201ENST00000435815 RABGEF1Q9UJ41 708 aa8.67□□□□□ -1.02
SNRPEP4-201ENST00000435815 ITGBL1O95965 494 aaPredicted RBP8.66□□□□□ -1.02
SNRPEP4-201ENST00000435815 RYDENQ9NUL5 291 aaKnown RBP8.66□□□□□ -1.02
SNRPEP4-201ENST00000435815 GTPBP6O43824 516 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms