RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 FAM205CA6NFA0 338 aa11.83□□□□□ -0.52
LINC00353-201ENST00000435401 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
LINC00353-201ENST00000435401 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
LINC00353-201ENST00000435401 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
LINC00353-201ENST00000435401 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
LINC00353-201ENST00000435401 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
LINC00353-201ENST00000435401 ERBB3P21860 1342 aa11.74□□□□□ -0.53
LINC00353-201ENST00000435401 CHGAP10645 457 aaKnown RBP11.73□□□□□ -0.53
LINC00353-201ENST00000435401 KIF3CO14782 793 aa11.72□□□□□ -0.53
LINC00353-201ENST00000435401 GPR153Q6NV75 609 aa11.72□□□□□ -0.53
LINC00353-201ENST00000435401 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
LINC00353-201ENST00000435401 PPP1R37O75864 691 aa11.71□□□□□ -0.53
LINC00353-201ENST00000435401 SPNS2Q8IVW8 549 aa11.71□□□□□ -0.53
LINC00353-201ENST00000435401 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
LINC00353-201ENST00000435401 KRTAP3-3Q9BYR6 98 aa11.68□□□□□ -0.54
LINC00353-201ENST00000435401 KRTAP3-2Q9BYR7 98 aa11.68□□□□□ -0.54
LINC00353-201ENST00000435401 ARSIQ5FYB1 569 aa11.67□□□□□ -0.54
LINC00353-201ENST00000435401 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
LINC00353-201ENST00000435401 VARS2Q5ST30 1063 aaKnown RBP11.65□□□□□ -0.54
LINC00353-201ENST00000435401 MMRN1Q13201 1228 aa11.64□□□□□ -0.55
LINC00353-201ENST00000435401 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
LINC00353-201ENST00000435401 SLC34A2O95436 690 aa11.61□□□□□ -0.55
LINC00353-201ENST00000435401 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
LINC00353-201ENST00000435401 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
LINC00353-201ENST00000435401 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC00353-201ENST00000435401 ZNF316A6NFI3 1004 aaPredicted RBP11.58□□□□□ -0.56
LINC00353-201ENST00000435401 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
LINC00353-201ENST00000435401 PCDHGA4Q9Y5G9 962 aa11.56□□□□□ -0.56
LINC00353-201ENST00000435401 FOXK1P85037 733 aa11.54□□□□□ -0.56
LINC00353-201ENST00000435401 NUDT7P0C024 238 aa11.53□□□□□ -0.56
LINC00353-201ENST00000435401 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
LINC00353-201ENST00000435401 DCAF8L2P0C7V8 631 aa11.49□□□□□ -0.57
LINC00353-201ENST00000435401 PTCD2Q8WV60 388 aaKnown RBP11.49□□□□□ -0.57
LINC00353-201ENST00000435401 LHX6Q9UPM6 363 aa11.48□□□□□ -0.57
LINC00353-201ENST00000435401 DSG2Q14126 1118 aa11.47□□□□□ -0.57
LINC00353-201ENST00000435401 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
LINC00353-201ENST00000435401 TBC1D12O60347 775 aa11.45□□□□□ -0.58
LINC00353-201ENST00000435401 PSDA5PKW4 1024 aaPredicted RBP11.43□□□□□ -0.58
LINC00353-201ENST00000435401 PDE4AP27815 886 aa11.42□□□□□ -0.58
LINC00353-201ENST00000435401 PBX2P40425 430 aa11.42□□□□□ -0.58
LINC00353-201ENST00000435401 CRISPLD2Q9H0B8 497 aa11.42□□□□□ -0.58
LINC00353-201ENST00000435401 KDM4FA0A1W2PPD8 638 aa11.41□□□□□ -0.58
LINC00353-201ENST00000435401 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
LINC00353-201ENST00000435401 PTGER2P43116 358 aa11.39□□□□□ -0.59
LINC00353-201ENST00000435401 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
LINC00353-201ENST00000435401 MYT1LQ9UL68 1186 aa11.38□□□□□ -0.59
LINC00353-201ENST00000435401 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
LINC00353-201ENST00000435401 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
LINC00353-201ENST00000435401 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
LINC00353-201ENST00000435401 POTEEQ6S8J3 1075 aa11.35□□□□□ -0.59
LINC00353-201ENST00000435401 OXER1Q8TDS5 423 aa11.35□□□□□ -0.59
LINC00353-201ENST00000435401 AXIN2Q9Y2T1 843 aa11.34□□□□□ -0.59
LINC00353-201ENST00000435401 ARHGAP33O14559 1287 aa11.33□□□□□ -0.6
LINC00353-201ENST00000435401 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
LINC00353-201ENST00000435401 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
LINC00353-201ENST00000435401 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00353-201ENST00000435401 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
LINC00353-201ENST00000435401 MFSD10Q14728 455 aa11.27□□□□□ -0.61
LINC00353-201ENST00000435401 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
LINC00353-201ENST00000435401 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
LINC00353-201ENST00000435401 ADGRD1Q6QNK2 874 aa11.24□□□□□ -0.61
LINC00353-201ENST00000435401 TK2O00142 265 aa11.23□□□□□ -0.61
LINC00353-201ENST00000435401 PSEN2P49810 448 aa11.23□□□□□ -0.61
LINC00353-201ENST00000435401 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
LINC00353-201ENST00000435401 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
LINC00353-201ENST00000435401 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
LINC00353-201ENST00000435401 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
LINC00353-201ENST00000435401 CADPS2Q86UW7 1296 aa11.21□□□□□ -0.61
LINC00353-201ENST00000435401 ZNF454Q8N9F8 522 aa11.21□□□□□ -0.61
LINC00353-201ENST00000435401 EVI5O60447 810 aa11.2□□□□□ -0.62
LINC00353-201ENST00000435401 FOSBP53539 338 aa11.19□□□□□ -0.62
LINC00353-201ENST00000435401 KCNK17Q96T54 332 aa11.17□□□□□ -0.62
LINC00353-201ENST00000435401 HRO43593 1189 aa11.16□□□□□ -0.62
LINC00353-201ENST00000435401 JPH4Q96JJ6 628 aa11.16□□□□□ -0.62
LINC00353-201ENST00000435401 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
LINC00353-201ENST00000435401 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
LINC00353-201ENST00000435401 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
LINC00353-201ENST00000435401 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
LINC00353-201ENST00000435401 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
LINC00353-201ENST00000435401 PTPREP23469 700 aa11.13□□□□□ -0.63
LINC00353-201ENST00000435401 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
LINC00353-201ENST00000435401 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
LINC00353-201ENST00000435401 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
LINC00353-201ENST00000435401 CAMK2BQ13554 666 aa11.1□□□□□ -0.63
LINC00353-201ENST00000435401 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
LINC00353-201ENST00000435401 VPS9D1Q9Y2B5 631 aa11.1□□□□□ -0.63
LINC00353-201ENST00000435401 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
LINC00353-201ENST00000435401 PCDHGA10Q9Y5H3 936 aa11.06□□□□□ -0.64
LINC00353-201ENST00000435401 ZBED2Q9BTP6 218 aa11.04□□□□□ -0.64
LINC00353-201ENST00000435401 PHF14O94880 888 aa11.03□□□□□ -0.64
LINC00353-201ENST00000435401 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
LINC00353-201ENST00000435401 DPYSL4O14531 572 aa11.02□□□□□ -0.65
LINC00353-201ENST00000435401 TYW1BQ6NUM6 668 aa11.02□□□□□ -0.65
LINC00353-201ENST00000435401 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
LINC00353-201ENST00000435401 BHMG1C9JSJ3 638 aaPredicted RBP11.01□□□□□ -0.65
LINC00353-201ENST00000435401 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
LINC00353-201ENST00000435401 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
LINC00353-201ENST00000435401 PPP1R3GB7ZBB8 358 aa10.99□□□□□ -0.65
LINC00353-201ENST00000435401 EPAS1Q99814 870 aa10.99□□□□□ -0.65
LINC00353-201ENST00000435401 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms