RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 POGZQ7Z3K3 1410 aa25.78■■□□□ 1.72
NUP50-210ENST00000434760 ZFYVE16Q7Z3T8 1539 aa25.75■■□□□ 1.71
NUP50-210ENST00000434760 ATP1B4Q9UN42 357 aaPredicted RBP25.75■■□□□ 1.71
NUP50-210ENST00000434760 CDC42BPAQ5VT25 1732 aa25.74■■□□□ 1.71
NUP50-210ENST00000434760 CDK11AQ9UQ88 783 aaPredicted RBP25.72■■□□□ 1.71
NUP50-210ENST00000434760 MADDQ8WXG6 1647 aa25.72■■□□□ 1.71
NUP50-210ENST00000434760 HECW2Q9P2P5 1572 aa25.71■■□□□ 1.71
NUP50-210ENST00000434760 ARHGAP5Q13017 1502 aa25.71■■□□□ 1.71
NUP50-210ENST00000434760 KDM5CP41229 1560 aa25.7■■□□□ 1.71
NUP50-210ENST00000434760 MAGI2Q86UL8 1455 aa25.7■■□□□ 1.7
NUP50-210ENST00000434760 YEATS2Q9ULM3 1422 aa25.7■■□□□ 1.7
NUP50-210ENST00000434760 SCAPERQ9BY12 1400 aa25.69■■□□□ 1.7
NUP50-210ENST00000434760 ITSN2Q9NZM3 1697 aa25.67■■□□□ 1.7
NUP50-210ENST00000434760 ABCC1P33527 1531 aa25.67■■□□□ 1.7
NUP50-210ENST00000434760 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
NUP50-210ENST00000434760 ZNF518AQ6AHZ1 1483 aa25.63■■□□□ 1.69
NUP50-210ENST00000434760 RIMS1Q86UR5 1692 aaKnown RBP25.62■■□□□ 1.69
NUP50-210ENST00000434760 PTPRMP28827 1452 aa25.62■■□□□ 1.69
NUP50-210ENST00000434760 EFCAB2Q5VUJ9 269 aa25.59■■□□□ 1.69
NUP50-210ENST00000434760 DIP2CQ9Y2E4 1556 aa25.58■■□□□ 1.69
NUP50-210ENST00000434760 ABCA6Q8N139 1617 aa25.58■■□□□ 1.69
NUP50-210ENST00000434760 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
NUP50-210ENST00000434760 SAMD9LQ8IVG5 1584 aa25.57■■□□□ 1.68
NUP50-210ENST00000434760 FER1L4A9Z1Z3 1794 aa25.56■■□□□ 1.68
NUP50-210ENST00000434760 REREQ9P2R6 1566 aa25.54■■□□□ 1.68
NUP50-210ENST00000434760 C9orf84Q5VXU9 1444 aa25.54■■□□□ 1.68
NUP50-210ENST00000434760 EHBP1L1Q8N3D4 1523 aa25.53■■□□□ 1.68
NUP50-210ENST00000434760 ATP10AO60312 1499 aa25.52■■□□□ 1.68
NUP50-210ENST00000434760 GPATCH8Q9UKJ3 1502 aaKnown RBP25.52■■□□□ 1.68
NUP50-210ENST00000434760 KIDINS220Q9ULH0 1771 aa25.51■■□□□ 1.67
NUP50-210ENST00000434760 TIAM1Q13009 1591 aa25.5■■□□□ 1.67
NUP50-210ENST00000434760 SYCP2Q9BX26 1530 aa25.49■■□□□ 1.67
NUP50-210ENST00000434760 MLH3Q9UHC1 1453 aa25.49■■□□□ 1.67
NUP50-210ENST00000434760 TRAPPC8Q9Y2L5 1435 aa25.49■■□□□ 1.67
NUP50-210ENST00000434760 ARID4BQ4LE39 1312 aaPredicted RBP25.48■■□□□ 1.67
NUP50-210ENST00000434760 AFAP1Q8N556 730 aa25.43■■□□□ 1.66
NUP50-210ENST00000434760 INO80Q9ULG1 1556 aaPredicted RBP25.42■■□□□ 1.66
NUP50-210ENST00000434760 MTUS2Q5JR59 1369 aa25.42■■□□□ 1.66
NUP50-210ENST00000434760 LMTK3Q96Q04 1460 aa25.41■■□□□ 1.66
NUP50-210ENST00000434760 AGLP35573 1532 aa25.39■■□□□ 1.66
NUP50-210ENST00000434760 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
NUP50-210ENST00000434760 VPS8Q8N3P4 1428 aa25.37■■□□□ 1.65
NUP50-210ENST00000434760 KIAA1107Q9UPP5 1409 aa25.36■■□□□ 1.65
NUP50-210ENST00000434760 PLEKHH2Q8IVE3 1493 aa25.35■■□□□ 1.65
NUP50-210ENST00000434760 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
NUP50-210ENST00000434760 ATP7AQ04656 1500 aa25.34■■□□□ 1.65
NUP50-210ENST00000434760 PLXNC1O60486 1568 aa25.34■■□□□ 1.65
NUP50-210ENST00000434760 NCOA2Q15596 1464 aa25.3■■□□□ 1.64
NUP50-210ENST00000434760 PREX1Q8TCU6 1659 aa25.29■■□□□ 1.64
NUP50-210ENST00000434760 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
NUP50-210ENST00000434760 C3P01024 1663 aa25.29■■□□□ 1.64
NUP50-210ENST00000434760 MLECQ14165 292 aa25.28■■□□□ 1.64
NUP50-210ENST00000434760 MBD5Q9P267 1494 aa25.27■■□□□ 1.64
NUP50-210ENST00000434760 ADGBQ8N7X0 1667 aa25.26■■□□□ 1.63
NUP50-210ENST00000434760 CFDP1Q9UEE9 299 aaPredicted RBP25.25■■□□□ 1.63
NUP50-210ENST00000434760 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
NUP50-210ENST00000434760 MAP3K1Q13233 1512 aa25.24■■□□□ 1.63
NUP50-210ENST00000434760 LRRC9Q6ZRR7 1453 aa25.24■■□□□ 1.63
NUP50-210ENST00000434760 MROH2AA6NES4 1674 aa25.23■■□□□ 1.63
NUP50-210ENST00000434760 CAMSAP2Q08AD1 1489 aa25.22■■□□□ 1.63
NUP50-210ENST00000434760 HNRNPMP52272 730 aaKnown RBP eCLIP25.21■■□□□ 1.63
NUP50-210ENST00000434760 SPAG9O60271 1321 aaKnown RBP25.2■■□□□ 1.62
NUP50-210ENST00000434760 MYT1LQ9UL68 1186 aa25.19■■□□□ 1.62
NUP50-210ENST00000434760 ZNF644Q9H582 1327 aaPredicted RBP25.18■■□□□ 1.62
NUP50-210ENST00000434760 A2MP01023 1474 aa25.17■■□□□ 1.62
NUP50-210ENST00000434760 ARHGEF5Q12774 1597 aa25.16■■□□□ 1.62
NUP50-210ENST00000434760 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
NUP50-210ENST00000434760 SETD1BQ9UPS6 1966 aaKnown RBP25.14■■□□□ 1.61
NUP50-210ENST00000434760 CLTCQ00610 1675 aaKnown RBP25.13■■□□□ 1.61
NUP50-210ENST00000434760 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
NUP50-210ENST00000434760 RTEL1-TNFRSF6BF6WH68 1400 aa25.12■■□□□ 1.61
NUP50-210ENST00000434760 CNTLNQ9NXG0 1405 aa25.12■■□□□ 1.61
NUP50-210ENST00000434760 CEBPAP49715 358 aaPredicted RBP25.09■■□□□ 1.61
NUP50-210ENST00000434760 HSPA2P54652 639 aa25.08■■□□□ 1.61
NUP50-210ENST00000434760 STRCQ7RTU9 1775 aa25.07■■□□□ 1.6
NUP50-210ENST00000434760 MAST1Q9Y2H9 1570 aa25.06■■□□□ 1.6
NUP50-210ENST00000434760 UHRF1BP1Q6BDS2 1440 aa25.04■■□□□ 1.6
NUP50-210ENST00000434760 KANK4Q5T7N3 995 aaPredicted RBP25.04■■□□□ 1.6
NUP50-210ENST00000434760 MYOM3Q5VTT5 1437 aa25.03■■□□□ 1.6
NUP50-210ENST00000434760 MYO3AQ8NEV4 1616 aa25.02■■□□□ 1.6
NUP50-210ENST00000434760 CROCC2H7BZ55 1655 aa25.02■■□□□ 1.6
NUP50-210ENST00000434760 ZNF142P52746 1687 aaPredicted RBP25.02■■□□□ 1.6
NUP50-210ENST00000434760 NPATQ14207 1427 aa25.01■■□□□ 1.59
NUP50-210ENST00000434760 MIA2Q96PC5 1412 aa25■■□□□ 1.59
NUP50-210ENST00000434760 FAM135AQ9P2D6 1515 aa24.99■■□□□ 1.59
NUP50-210ENST00000434760 ILDR1Q86SU0 546 aaPredicted RBP24.98■■□□□ 1.59
NUP50-210ENST00000434760 DHX29Q7Z478 1369 aaKnown RBP24.97■■□□□ 1.59
NUP50-210ENST00000434760 RNF17Q9BXT8 1623 aaKnown RBP24.97■■□□□ 1.59
NUP50-210ENST00000434760 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
NUP50-210ENST00000434760 PTPN23Q9H3S7 1636 aa24.94■■□□□ 1.58
NUP50-210ENST00000434760 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
NUP50-210ENST00000434760 ZMYM3Q14202 1370 aa24.93■■□□□ 1.58
NUP50-210ENST00000434760 ESF1Q9H501 851 aaKnown RBP24.93■■□□□ 1.58
NUP50-210ENST00000434760 PTPRKQ15262 1439 aa24.93■■□□□ 1.58
NUP50-210ENST00000434760 RSPH4AQ5TD94 716 aa24.91■■□□□ 1.58
NUP50-210ENST00000434760 MROH1Q8NDA8 1641 aa24.9■■□□□ 1.58
NUP50-210ENST00000434760 CEP170BQ9Y4F5 1589 aaPredicted RBP24.9■■□□□ 1.58
NUP50-210ENST00000434760 DNMT1P26358 1616 aaKnown RBP24.89■■□□□ 1.57
NUP50-210ENST00000434760 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.57
NUP50-210ENST00000434760 ZC3H13Q5T200 1668 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms