RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 SCUBE2Q9NQ36 999 aa9.06□□□□□ -0.96
HMGB3P10-201ENST00000434734 GTPBP6O43824 516 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P10-201ENST00000434734 ILDR1Q86SU0 546 aaPredicted RBP9.04□□□□□ -0.96
HMGB3P10-201ENST00000434734 CABP2Q9NPB3 220 aa9.04□□□□□ -0.96
HMGB3P10-201ENST00000434734 ZMYND15Q9H091 742 aa9.02□□□□□ -0.97
HMGB3P10-201ENST00000434734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.02□□□□□ -0.97
HMGB3P10-201ENST00000434734 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P10-201ENST00000434734 PDCD7Q8N8D1 485 aaKnown RBP9.01□□□□□ -0.97
HMGB3P10-201ENST00000434734 ZFP91Q96JP5 570 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P10-201ENST00000434734 C1orf115Q9H7X2 142 aa9.01□□□□□ -0.97
HMGB3P10-201ENST00000434734 RSPH6AQ9H0K4 717 aa9□□□□□ -0.97
HMGB3P10-201ENST00000434734 L3MBTL3Q96JM7 780 aaPredicted RBP8.98□□□□□ -0.97
HMGB3P10-201ENST00000434734 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
HMGB3P10-201ENST00000434734 SOX12O15370 315 aa8.97□□□□□ -0.97
HMGB3P10-201ENST00000434734 EFCAB3Q8N7B9 438 aa8.96□□□□□ -0.98
HMGB3P10-201ENST00000434734 LOC105371045A0A1W2PR82 267 aa8.95□□□□□ -0.98
HMGB3P10-201ENST00000434734 P3H3Q8IVL6 736 aa8.95□□□□□ -0.98
HMGB3P10-201ENST00000434734 KCNV2Q8TDN2 545 aa8.95□□□□□ -0.98
HMGB3P10-201ENST00000434734 ZC3H15Q8WU90 426 aaKnown RBP8.95□□□□□ -0.98
HMGB3P10-201ENST00000434734 BCL11BQ9C0K0 894 aaPredicted RBP8.95□□□□□ -0.98
HMGB3P10-201ENST00000434734 CCDC9Q9Y3X0 531 aaKnown RBP8.95□□□□□ -0.98
HMGB3P10-201ENST00000434734 STK25O00506 426 aa8.93□□□□□ -0.98
HMGB3P10-201ENST00000434734 NECTIN2Q92692 538 aa8.93□□□□□ -0.98
HMGB3P10-201ENST00000434734 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.92□□□□□ -0.98
HMGB3P10-201ENST00000434734 STK24Q9Y6E0 443 aa8.92□□□□□ -0.98
HMGB3P10-201ENST00000434734 G3V3G9 751 aa8.9□□□□□ -0.98
HMGB3P10-201ENST00000434734 C3orf67Q6ZVT6 689 aa8.9□□□□□ -0.98
HMGB3P10-201ENST00000434734 ZBTB7CA1YPR0 619 aa8.89□□□□□ -0.99
HMGB3P10-201ENST00000434734 SLAIN1Q8ND83 568 aa8.89□□□□□ -0.99
HMGB3P10-201ENST00000434734 NLRP6P59044 892 aa8.88□□□□□ -0.99
HMGB3P10-201ENST00000434734 BOLA1Q9Y3E2 137 aa8.88□□□□□ -0.99
HMGB3P10-201ENST00000434734 ARID3CA6NKF2 412 aa8.87□□□□□ -0.99
HMGB3P10-201ENST00000434734 DPY19L2Q6NUT2 758 aa8.87□□□□□ -0.99
HMGB3P10-201ENST00000434734 TMEM121BQ9BXQ6 578 aaPredicted RBP8.86□□□□□ -0.99
HMGB3P10-201ENST00000434734 PHF8Q9UPP1 1060 aa8.85□□□□□ -0.99
HMGB3P10-201ENST00000434734 PDIA4P13667 645 aaKnown RBP8.84□□□□□ -0.99
HMGB3P10-201ENST00000434734 FBXO22Q8NEZ5 403 aa8.84□□□□□ -0.99
HMGB3P10-201ENST00000434734 SNPHO15079 494 aa8.83□□□□□ -1
HMGB3P10-201ENST00000434734 MS4A4AQ96JQ5 239 aa8.83□□□□□ -1
HMGB3P10-201ENST00000434734 MFRPQ9BY79 579 aa8.82□□□□□ -1
HMGB3P10-201ENST00000434734 CADPS2Q86UW7 1296 aa8.8□□□□□ -1
HMGB3P10-201ENST00000434734 MICALL2Q8IY33 904 aa8.8□□□□□ -1
HMGB3P10-201ENST00000434734 GPBP1L1Q9HC44 474 aaPredicted RBP8.79□□□□□ -1
HMGB3P10-201ENST00000434734 APBB1O00213 710 aa8.78□□□□□ -1
HMGB3P10-201ENST00000434734 IGSF3O75054 1194 aa8.78□□□□□ -1
HMGB3P10-201ENST00000434734 FAM163AQ96GL9 167 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P10-201ENST00000434734 POTEMA6NI47 508 aa8.76□□□□□ -1.01
HMGB3P10-201ENST00000434734 IL27Q8NEV9 243 aa8.76□□□□□ -1.01
HMGB3P10-201ENST00000434734 ZMYND10O75800 440 aa8.75□□□□□ -1.01
HMGB3P10-201ENST00000434734 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P10-201ENST00000434734 RYDENQ9NUL5 291 aaKnown RBP8.75□□□□□ -1.01
HMGB3P10-201ENST00000434734 WDR70Q9NW82 654 aa8.74□□□□□ -1.01
HMGB3P10-201ENST00000434734 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
HMGB3P10-201ENST00000434734 TTBK1Q5TCY1 1321 aaPredicted RBP8.73□□□□□ -1.01
HMGB3P10-201ENST00000434734 KCTD17Q8N5Z5 321 aa8.72□□□□□ -1.01
HMGB3P10-201ENST00000434734 ST18O60284 1047 aa8.71□□□□□ -1.02
HMGB3P10-201ENST00000434734 SEMA3EO15041 775 aa8.7□□□□□ -1.02
HMGB3P10-201ENST00000434734 PCDH10Q9P2E7 1040 aa8.7□□□□□ -1.02
HMGB3P10-201ENST00000434734 TESPA1A2RU30 521 aaPredicted RBP8.69□□□□□ -1.02
HMGB3P10-201ENST00000434734 MYT1Q01538 1121 aa8.69□□□□□ -1.02
HMGB3P10-201ENST00000434734 DOK7Q18PE1 504 aa8.68□□□□□ -1.02
HMGB3P10-201ENST00000434734 CCDC82Q8N4S0 544 aa8.68□□□□□ -1.02
HMGB3P10-201ENST00000434734 RAD21O60216 631 aa8.67□□□□□ -1.02
HMGB3P10-201ENST00000434734 TMEM92Q6UXU6 159 aa8.67□□□□□ -1.02
HMGB3P10-201ENST00000434734 PLSCR2Q9NRY7 297 aa8.67□□□□□ -1.02
HMGB3P10-201ENST00000434734 SHROOM4Q9ULL8 1493 aa8.66□□□□□ -1.02
HMGB3P10-201ENST00000434734 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
HMGB3P10-201ENST00000434734 HOXB3P14651 431 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P10-201ENST00000434734 BARGINQ6ZT62 677 aa8.65□□□□□ -1.02
HMGB3P10-201ENST00000434734 RGS22Q8NE09 1264 aa8.65□□□□□ -1.02
HMGB3P10-201ENST00000434734 KIF3CO14782 793 aa8.64□□□□□ -1.03
HMGB3P10-201ENST00000434734 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
HMGB3P10-201ENST00000434734 PPP1R37O75864 691 aa8.64□□□□□ -1.03
HMGB3P10-201ENST00000434734 ARHGEF1Q92888 912 aaKnown RBP8.64□□□□□ -1.03
HMGB3P10-201ENST00000434734 ZSWIM6Q9HCJ5 1215 aa8.63□□□□□ -1.03
HMGB3P10-201ENST00000434734 EIF5BO60841 1220 aaKnown RBP8.62□□□□□ -1.03
HMGB3P10-201ENST00000434734 ZNF710Q8N1W2 664 aa8.62□□□□□ -1.03
HMGB3P10-201ENST00000434734 ZNF428Q96B54 188 aa8.62□□□□□ -1.03
HMGB3P10-201ENST00000434734 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
HMGB3P10-201ENST00000434734 TMC2Q8TDI7 906 aa8.61□□□□□ -1.03
HMGB3P10-201ENST00000434734 AK7Q96M32 723 aa8.61□□□□□ -1.03
HMGB3P10-201ENST00000434734 C2orf72A6NCS6 295 aa8.59□□□□□ -1.03
HMGB3P10-201ENST00000434734 TRAIPQ9BWF2 469 aa8.59□□□□□ -1.03
HMGB3P10-201ENST00000434734 HOXB1P14653 301 aaPredicted RBP8.58□□□□□ -1.04
HMGB3P10-201ENST00000434734 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
HMGB3P10-201ENST00000434734 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
HMGB3P10-201ENST00000434734 EMP3P54852 163 aa8.57□□□□□ -1.04
HMGB3P10-201ENST00000434734 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
HMGB3P10-201ENST00000434734 MARVELD3Q96A59 401 aa8.56□□□□□ -1.04
HMGB3P10-201ENST00000434734 CLUAP1Q96AJ1 413 aa8.56□□□□□ -1.04
HMGB3P10-201ENST00000434734 SLC34A2O95436 690 aa8.55□□□□□ -1.04
HMGB3P10-201ENST00000434734 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
HMGB3P10-201ENST00000434734 RBM25P49756 843 aaKnown RBP8.54□□□□□ -1.04
HMGB3P10-201ENST00000434734 TRAK2O60296 914 aa8.53□□□□□ -1.04
HMGB3P10-201ENST00000434734 FOXK1P85037 733 aa8.53□□□□□ -1.04
HMGB3P10-201ENST00000434734 PDE4DQ08499 809 aa8.53□□□□□ -1.04
HMGB3P10-201ENST00000434734 E2F4Q16254 413 aa8.53□□□□□ -1.04
HMGB3P10-201ENST00000434734 GPR153Q6NV75 609 aa8.53□□□□□ -1.04
HMGB3P10-201ENST00000434734 CDAN1Q8IWY9 1227 aa8.53□□□□□ -1.04
HMGB3P10-201ENST00000434734 FAM117AQ9C073 453 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms