RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 ROCK1Q13464 1354 aa34.2■■■■□ 3.07
MBD3-202ENST00000434436 DENND4BO75064 1496 aaPredicted RBP34.2■■■■□ 3.07
MBD3-202ENST00000434436 GPATCH8Q9UKJ3 1502 aaKnown RBP34.19■■■■□ 3.06
MBD3-202ENST00000434436 TONSLQ96HA7 1378 aa34.17■■■■□ 3.06
MBD3-202ENST00000434436 ATP10BO94823 1461 aa34.17■■■■□ 3.06
MBD3-202ENST00000434436 YTHDC1Q96MU7 727 aaKnown RBP34.15■■■■□ 3.06
MBD3-202ENST00000434436 CAMSAP2Q08AD1 1489 aa34.15■■■■□ 3.06
MBD3-202ENST00000434436 TRIM52Q96A61 297 aa34.13■■■■□ 3.05
MBD3-202ENST00000434436 CFDP1Q9UEE9 299 aaPredicted RBP34.12■■■■□ 3.05
MBD3-202ENST00000434436 PTPRGP23470 1445 aa34.07■■■■□ 3.05
MBD3-202ENST00000434436 PLEKHD1A6NEE1 506 aa34.07■■■■□ 3.04
MBD3-202ENST00000434436 KDM5BQ9UGL1 1544 aa34.06■■■■□ 3.04
MBD3-202ENST00000434436 MPHOSPH9Q99550 1183 aa34.05■■■■□ 3.04
MBD3-202ENST00000434436 CDC42BPAQ5VT25 1732 aa34.05■■■■□ 3.04
MBD3-202ENST00000434436 SHROOM2Q13796 1616 aa34.05■■■■□ 3.04
MBD3-202ENST00000434436 ABCC10Q5T3U5 1492 aa34.05■■■■□ 3.04
MBD3-202ENST00000434436 CROCC2H7BZ55 1655 aa34.01■■■■□ 3.03
MBD3-202ENST00000434436 ADGBQ8N7X0 1667 aa34■■■■□ 3.03
MBD3-202ENST00000434436 ZNF777Q9ULD5 760 aaPredicted RBP33.99■■■■□ 3.03
MBD3-202ENST00000434436 NCOA1Q15788 1441 aa33.95■■■■□ 3.03
MBD3-202ENST00000434436 ADGRL2O95490 1459 aa33.94■■■■□ 3.02
MBD3-202ENST00000434436 HIRIP3Q9BW71 556 aaPredicted RBP33.91■■■■□ 3.02
MBD3-202ENST00000434436 FOXD1Q16676 465 aa33.9■■■■□ 3.02
MBD3-202ENST00000434436 GTF3C3Q9Y5Q9 886 aa33.9■■■■□ 3.02
MBD3-202ENST00000434436 ERCC6L2Q5T890 1561 aa33.89■■■■□ 3.02
MBD3-202ENST00000434436 DDX10Q13206 875 aaKnown RBP33.85■■■■□ 3.01
MBD3-202ENST00000434436 ANKRD30BQ9BXX2 1392 aa33.85■■■■□ 3.01
MBD3-202ENST00000434436 PZPP20742 1482 aa33.81■■■■□ 3
MBD3-202ENST00000434436 ANKRD30AQ9BXX3 1397 aa33.81■■■■□ 3
MBD3-202ENST00000434436 SLC4A1APQ9BWU0 796 aaKnown RBP33.79■■■■□ 3
MBD3-202ENST00000434436 SHANK2Q9UPX8 1470 aa33.79■■■■□ 3
MBD3-202ENST00000434436 CDC42BPBQ9Y5S2 1711 aa33.77■■■■□ 3
MBD3-202ENST00000434436 RPRD2Q5VT52 1461 aaKnown RBP33.76■■■■□ 3
MBD3-202ENST00000434436 CLASP1Q7Z460 1538 aa33.76■■■□□ 2.99
MBD3-202ENST00000434436 C9orf84Q5VXU9 1444 aa33.75■■■□□ 2.99
MBD3-202ENST00000434436 ABCC2Q92887 1545 aa33.75■■■□□ 2.99
MBD3-202ENST00000434436 PREX2Q70Z35 1606 aa33.74■■■□□ 2.99
MBD3-202ENST00000434436 L3MBTL2Q969R5 705 aa33.74■■■□□ 2.99
MBD3-202ENST00000434436 ARHGEF5Q12774 1597 aa33.72■■■□□ 2.99
MBD3-202ENST00000434436 ANKRD50Q9ULJ7 1429 aa33.71■■■□□ 2.99
MBD3-202ENST00000434436 SAMD9LQ8IVG5 1584 aa33.71■■■□□ 2.99
MBD3-202ENST00000434436 MBD5Q9P267 1494 aa33.7■■■□□ 2.98
MBD3-202ENST00000434436 HNRNPMP52272 730 aaKnown RBP eCLIP33.68■■■□□ 2.983e-6■■■■□ 22.1
MBD3-202ENST00000434436 TEX14Q8IWB6 1497 aa33.67■■■□□ 2.98
MBD3-202ENST00000434436 TTC37Q6PGP7 1564 aa33.66■■■□□ 2.98
MBD3-202ENST00000434436 TSPY4P0CV99 314 aa33.64■■■□□ 2.98
MBD3-202ENST00000434436 TSPY10P0CW01 314 aa33.64■■■□□ 2.98
MBD3-202ENST00000434436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.64■■■□□ 2.986e-7■■□□□ 14.4
MBD3-202ENST00000434436 KCNH8Q96L42 1107 aa33.62■■■□□ 2.97
MBD3-202ENST00000434436 KIAA1107Q9UPP5 1409 aa33.62■■■□□ 2.97
MBD3-202ENST00000434436 CCDC141Q6ZP82 1450 aa33.59■■■□□ 2.97
MBD3-202ENST00000434436 HSPA5P11021 654 aaKnown RBP33.58■■■□□ 2.97
MBD3-202ENST00000434436 KIF15Q9NS87 1388 aa33.56■■■□□ 2.96
MBD3-202ENST00000434436 PKD2Q13563 968 aa33.55■■■□□ 2.96
MBD3-202ENST00000434436 NBPF8Q3BBV2 869 aa33.54■■■□□ 2.96
MBD3-202ENST00000434436 ZCCHC11Q5TAX3 1644 aaKnown RBP33.54■■■□□ 2.96
MBD3-202ENST00000434436 ARHGAP5Q13017 1502 aa33.54■■■□□ 2.96
MBD3-202ENST00000434436 MYO5CQ9NQX4 1742 aa33.54■■■□□ 2.96
MBD3-202ENST00000434436 UHRF1BP1LA0JNW5 1464 aa33.54■■■□□ 2.96
MBD3-202ENST00000434436 KDM5DQ9BY66 1539 aa33.53■■■□□ 2.96
MBD3-202ENST00000434436 SYCP2Q9BX26 1530 aa33.52■■■□□ 2.96
MBD3-202ENST00000434436 NUP155O75694 1391 aa33.51■■■□□ 2.96
MBD3-202ENST00000434436 EIF4G2P78344 907 aaKnown RBP eCLIP33.51■■■□□ 2.95
MBD3-202ENST00000434436 RSPH4AQ5TD94 716 aa33.51■■■□□ 2.95
MBD3-202ENST00000434436 ANP32CO43423 234 aa33.45■■■□□ 2.95
MBD3-202ENST00000434436 MAST1Q9Y2H9 1570 aa33.45■■■□□ 2.95
MBD3-202ENST00000434436 WASHC2AQ641Q2 1341 aa33.45■■■□□ 2.94
MBD3-202ENST00000434436 CCER2I3L3R5 266 aa33.41■■■□□ 2.94
MBD3-202ENST00000434436 PLEKHH2Q8IVE3 1493 aa33.39■■■□□ 2.94
MBD3-202ENST00000434436 PLCH2O75038 1416 aa33.37■■■□□ 2.93
MBD3-202ENST00000434436 ARHGEF12Q9NZN5 1544 aa33.36■■■□□ 2.93
MBD3-202ENST00000434436 SPATA31E1Q6ZUB1 1445 aa33.34■■■□□ 2.93
MBD3-202ENST00000434436 PLXNC1O60486 1568 aa33.32■■■□□ 2.92
MBD3-202ENST00000434436 C11orf95C9JLR9 678 aaPredicted RBP33.31■■■□□ 2.92
MBD3-202ENST00000434436 FAM135AQ9P2D6 1515 aa33.31■■■□□ 2.92
MBD3-202ENST00000434436 UNC13BO14795 1591 aa33.28■■■□□ 2.92
MBD3-202ENST00000434436 CCDC7Q96M83 1385 aa33.26■■■□□ 2.92
MBD3-202ENST00000434436 EFCAB2Q5VUJ9 269 aa33.25■■■□□ 2.91
MBD3-202ENST00000434436 ABCC1P33527 1531 aa33.25■■■□□ 2.91
MBD3-202ENST00000434436 POLR1AO95602 1720 aaPredicted RBP33.24■■■□□ 2.91
MBD3-202ENST00000434436 CNTLNQ9NXG0 1405 aa33.22■■■□□ 2.91
MBD3-202ENST00000434436 UHRF1BP1Q6BDS2 1440 aa33.21■■■□□ 2.91
MBD3-202ENST00000434436 DUOX2Q9NRD8 1548 aa33.19■■■□□ 2.9
MBD3-202ENST00000434436 ZNF326Q5BKZ1 582 aaKnown RBP33.18■■■□□ 2.9
MBD3-202ENST00000434436 TRAPPC8Q9Y2L5 1435 aa33.17■■■□□ 2.9
MBD3-202ENST00000434436 ARAP3Q8WWN8 1544 aa33.16■■■□□ 2.9
MBD3-202ENST00000434436 IQGAP3Q86VI3 1631 aa33.16■■■□□ 2.9
MBD3-202ENST00000434436 WDR7Q9Y4E6 1490 aa33.15■■■□□ 2.9
MBD3-202ENST00000434436 KIF7Q2M1P5 1343 aa33.14■■■□□ 2.9
MBD3-202ENST00000434436 RALGAPBQ86X10 1494 aa33.12■■■□□ 2.89
MBD3-202ENST00000434436 KDM5CP41229 1560 aa33.12■■■□□ 2.89
MBD3-202ENST00000434436 ERBINQ96RT1 1412 aa33.12■■■□□ 2.89
MBD3-202ENST00000434436 USP47Q96K76 1375 aa33.11■■■□□ 2.89
MBD3-202ENST00000434436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.11■■■□□ 2.892e-7■□□□□ 9.9
MBD3-202ENST00000434436 MAGI2Q86UL8 1455 aa33.1■■■□□ 2.89
MBD3-202ENST00000434436 BCORL1Q5H9F3 1711 aa33.09■■■□□ 2.89
MBD3-202ENST00000434436 PLA2R1Q13018 1463 aa33.09■■■□□ 2.89
MBD3-202ENST00000434436 ABCA9Q8IUA7 1624 aa33.04■■■□□ 2.88
MBD3-202ENST00000434436 CCDC144AA2RUR9 1427 aa33.04■■■□□ 2.88
MBD3-202ENST00000434436 DCAF11Q8TEB1 546 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms