RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ECM2O94769 699 aaPredicted RBP8.48□□□□□ -1.05
RFC3-202ENST00000434425 GRIN2AQ12879 1464 aa8.47□□□□□ -1.05
RFC3-202ENST00000434425 NPM1P06748 294 aaKnown RBP eCLIP8.47□□□□□ -1.05
RFC3-202ENST00000434425 CDK11BP21127 795 aaKnown RBP8.47□□□□□ -1.05
RFC3-202ENST00000434425 CEP170Q5SW79 1584 aa8.47□□□□□ -1.05
RFC3-202ENST00000434425 KIF13AQ9H1H9 1805 aa8.45□□□□□ -1.06
RFC3-202ENST00000434425 NUP160Q12769 1436 aa8.45□□□□□ -1.06
RFC3-202ENST00000434425 RGL2O15211 777 aa8.45□□□□□ -1.06
RFC3-202ENST00000434425 HMGB1P09429 215 aaKnown RBP8.45□□□□□ -1.06
RFC3-202ENST00000434425 WRNQ14191 1432 aaPredicted RBP eCLIP8.44□□□□□ -1.06
RFC3-202ENST00000434425 SHROOM2Q13796 1616 aa8.43□□□□□ -1.06
RFC3-202ENST00000434425 FXR2P51116 673 aaKnown RBP eCLIP8.43□□□□□ -1.06
RFC3-202ENST00000434425 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
RFC3-202ENST00000434425 ADAMTS12P58397 1594 aa8.43□□□□□ -1.06
RFC3-202ENST00000434425 GABBR2O75899 941 aa8.42□□□□□ -1.06
RFC3-202ENST00000434425 FAM9AQ8IZU1 332 aaPredicted RBP8.42□□□□□ -1.06
RFC3-202ENST00000434425 FHAD1B1AJZ9 1412 aa8.41□□□□□ -1.06
RFC3-202ENST00000434425 PRG4Q92954 1404 aaPredicted RBP8.41□□□□□ -1.06
RFC3-202ENST00000434425 FAM69CQ0P6D2 419 aa8.41□□□□□ -1.06
RFC3-202ENST00000434425 AKT1S1Q96B36 256 aa8.41□□□□□ -1.06
RFC3-202ENST00000434425 BRD2P25440 801 aaKnown RBP8.4□□□□□ -1.06
RFC3-202ENST00000434425 HSP90B1P14625 803 aaKnown RBP8.39□□□□□ -1.07
RFC3-202ENST00000434425 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
RFC3-202ENST00000434425 TOP2BQ02880 1626 aa8.38□□□□□ -1.07
RFC3-202ENST00000434425 ERICH3Q5RHP9 1530 aa8.38□□□□□ -1.07
RFC3-202ENST00000434425 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
RFC3-202ENST00000434425 BIVM-ERCC5R4GMW8 1640 aa8.38□□□□□ -1.07
RFC3-202ENST00000434425 IGSF3O75054 1194 aa8.37□□□□□ -1.07
RFC3-202ENST00000434425 CIZ1Q9ULV3 898 aaPredicted RBP8.37□□□□□ -1.07
RFC3-202ENST00000434425 ABCC10Q5T3U5 1492 aa8.36□□□□□ -1.07
RFC3-202ENST00000434425 BBXQ8WY36 941 aaPredicted RBP8.36□□□□□ -1.07
RFC3-202ENST00000434425 PDE4CQ08493 712 aa8.35□□□□□ -1.07
RFC3-202ENST00000434425 TSPOAP1O95153 1857 aa8.35□□□□□ -1.07
RFC3-202ENST00000434425 PAXIP1Q6ZW49 1069 aaPredicted RBP8.34□□□□□ -1.07
RFC3-202ENST00000434425 TAF7LQ5H9L4 462 aa8.33□□□□□ -1.08
RFC3-202ENST00000434425 ADCY10Q96PN6 1610 aa8.33□□□□□ -1.08
RFC3-202ENST00000434425 CFAP44Q96MT7 982 aa8.32□□□□□ -1.08
RFC3-202ENST00000434425 PUS7Q96PZ0 661 aaKnown RBP8.32□□□□□ -1.08
RFC3-202ENST00000434425 DIP2BQ9P265 1576 aa8.32□□□□□ -1.08
RFC3-202ENST00000434425 MAPKBP1O60336 1514 aa8.32□□□□□ -1.08
RFC3-202ENST00000434425 RUSC2Q8N2Y8 1516 aa8.31□□□□□ -1.08
RFC3-202ENST00000434425 NBR1Q14596 966 aa8.31□□□□□ -1.08
RFC3-202ENST00000434425 ILDR1Q86SU0 546 aaPredicted RBP8.31□□□□□ -1.08
RFC3-202ENST00000434425 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.3□□□□□ -1.08
RFC3-202ENST00000434425 KDM6BO15054 1643 aa8.29□□□□□ -1.08
RFC3-202ENST00000434425 REM2Q8IYK8 340 aaPredicted RBP8.29□□□□□ -1.08
RFC3-202ENST00000434425 IGF1RP08069 1367 aa8.29□□□□□ -1.08
RFC3-202ENST00000434425 KIAA0586Q9BVV6 1533 aa8.28□□□□□ -1.08
RFC3-202ENST00000434425 NUBP1P53384 320 aa8.28□□□□□ -1.08
RFC3-202ENST00000434425 ZBTB47Q9UFB7 747 aaPredicted RBP8.28□□□□□ -1.08
RFC3-202ENST00000434425 CHGAP10645 457 aaKnown RBP8.27□□□□□ -1.09
RFC3-202ENST00000434425 DHX37Q8IY37 1157 aaKnown RBP8.27□□□□□ -1.09
RFC3-202ENST00000434425 RNF25Q96BH1 459 aaPredicted RBP8.27□□□□□ -1.09
RFC3-202ENST00000434425 NEFLP07196 543 aa8.26□□□□□ -1.09
RFC3-202ENST00000434425 PTPRGP23470 1445 aa8.26□□□□□ -1.09
RFC3-202ENST00000434425 TSHZ2Q9NRE2 1034 aa8.25□□□□□ -1.09
RFC3-202ENST00000434425 CREBZFQ9NS37 354 aa8.25□□□□□ -1.09
RFC3-202ENST00000434425 CLEC11AQ9Y240 323 aa8.25□□□□□ -1.09
RFC3-202ENST00000434425 SPDYE1Q8NFV5 336 aaPredicted RBP8.24□□□□□ -1.09
RFC3-202ENST00000434425 MNX1P50219 401 aaPredicted RBP8.23□□□□□ -1.09
RFC3-202ENST00000434425 SPRYD3Q8NCJ5 442 aa8.23□□□□□ -1.09
RFC3-202ENST00000434425 PPRC1Q5VV67 1664 aaKnown RBP8.22□□□□□ -1.09
RFC3-202ENST00000434425 ASXL2Q76L83 1435 aa8.22□□□□□ -1.09
RFC3-202ENST00000434425 KIF27Q86VH2 1401 aa8.22□□□□□ -1.09
RFC3-202ENST00000434425 COL17A1Q9UMD9 1497 aaPredicted RBP8.22□□□□□ -1.09
RFC3-202ENST00000434425 CARMIL1Q5VZK9 1371 aa8.22□□□□□ -1.09
RFC3-202ENST00000434425 TNIKQ9UKE5 1360 aa8.22□□□□□ -1.09
RFC3-202ENST00000434425 C19orf67A6NJJ6 358 aa8.21□□□□□ -1.09
RFC3-202ENST00000434425 PITPNM1O00562 1244 aa8.21□□□□□ -1.09
RFC3-202ENST00000434425 ABCC2Q92887 1545 aa8.21□□□□□ -1.1
RFC3-202ENST00000434425 CUL7Q14999 1698 aa8.21□□□□□ -1.1
RFC3-202ENST00000434425 DCAF8Q5TAQ9 597 aa8.2□□□□□ -1.1
RFC3-202ENST00000434425 CARMIL2Q6F5E8 1435 aa8.2□□□□□ -1.1
RFC3-202ENST00000434425 ADGRL1O94910 1474 aa8.2□□□□□ -1.1
RFC3-202ENST00000434425 PLB1Q6P1J6 1458 aa8.2□□□□□ -1.1
RFC3-202ENST00000434425 GSE1Q14687 1217 aa8.19□□□□□ -1.1
RFC3-202ENST00000434425 GLI2P10070 1586 aa8.19□□□□□ -1.1
RFC3-202ENST00000434425 ZBTB7CA1YPR0 619 aa8.19□□□□□ -1.1
RFC3-202ENST00000434425 PRR29P0C7W0 189 aa8.19□□□□□ -1.1
RFC3-202ENST00000434425 POTEIP0CG38 1075 aa8.18□□□□□ -1.1
RFC3-202ENST00000434425 HS6ST3Q8IZP7 471 aa8.18□□□□□ -1.1
RFC3-202ENST00000434425 UACAQ9BZF9 1416 aa8.18□□□□□ -1.1
RFC3-202ENST00000434425 UHRF1BP1LA0JNW5 1464 aa8.17□□□□□ -1.1
RFC3-202ENST00000434425 RASEFQ8IZ41 740 aa8.17□□□□□ -1.1
RFC3-202ENST00000434425 BCCIPQ9P287 314 aaKnown RBP eCLIP8.17□□□□□ -1.1
RFC3-202ENST00000434425 EPRSP07814 1512 aaKnown RBP8.17□□□□□ -1.1
RFC3-202ENST00000434425 NKX1-1Q15270 411 aaPredicted RBP8.16□□□□□ -1.1
RFC3-202ENST00000434425 DISP1Q96F81 1524 aa8.16□□□□□ -1.1
RFC3-202ENST00000434425 MAP3K4Q9Y6R4 1608 aa8.15□□□□□ -1.1
RFC3-202ENST00000434425 IQGAP2Q13576 1575 aa8.15□□□□□ -1.1
RFC3-202ENST00000434425 OTUD5Q96G74 571 aa8.15□□□□□ -1.1
RFC3-202ENST00000434425 HECW2Q9P2P5 1572 aa8.15□□□□□ -1.11
RFC3-202ENST00000434425 KDM5BQ9UGL1 1544 aa8.14□□□□□ -1.11
RFC3-202ENST00000434425 NECTIN2Q92692 538 aa8.13□□□□□ -1.11
RFC3-202ENST00000434425 PKNOX2Q96KN3 472 aa8.13□□□□□ -1.11
RFC3-202ENST00000434425 KCNH8Q96L42 1107 aa8.13□□□□□ -1.11
RFC3-202ENST00000434425 ZCCHC11Q5TAX3 1644 aaKnown RBP8.13□□□□□ -1.11
RFC3-202ENST00000434425 RIOK3O14730 519 aaKnown RBP8.13□□□□□ -1.11
RFC3-202ENST00000434425 TEX14Q8IWB6 1497 aa8.12□□□□□ -1.11
RFC3-202ENST00000434425 FGD1P98174 961 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms