RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 PHF8Q9UPP1 1060 aa15.28■□□□□ 0.04
PTPRK-212ENST00000434424 TMEM92Q6UXU6 159 aa15.27■□□□□ 0.04
PTPRK-212ENST00000434424 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
PTPRK-212ENST00000434424 SPNS2Q8IVW8 549 aa15.25■□□□□ 0.03
PTPRK-212ENST00000434424 HS3ST6Q96QI5 342 aa15.25■□□□□ 0.03
PTPRK-212ENST00000434424 KDM2AQ9Y2K7 1162 aa15.25■□□□□ 0.03
PTPRK-212ENST00000434424 FAM205CA6NFA0 338 aa15.24■□□□□ 0.03
PTPRK-212ENST00000434424 CFAP44Q96MT7 982 aa15.24■□□□□ 0.03
PTPRK-212ENST00000434424 MMRN1Q13201 1228 aa15.2■□□□□ 0.02
PTPRK-212ENST00000434424 KRTAP3-3Q9BYR6 98 aa15.2■□□□□ 0.02
PTPRK-212ENST00000434424 KRTAP3-2Q9BYR7 98 aa15.2■□□□□ 0.02
PTPRK-212ENST00000434424 HOXB1P14653 301 aaPredicted RBP15.18■□□□□ 0.02
PTPRK-212ENST00000434424 BCL11BQ9C0K0 894 aaPredicted RBP15.18■□□□□ 0.02
PTPRK-212ENST00000434424 TPRNQ4KMQ1 711 aa15.17■□□□□ 0.02
PTPRK-212ENST00000434424 FBXO22Q8NEZ5 403 aa15.16■□□□□ 0.02
PTPRK-212ENST00000434424 DOK7Q18PE1 504 aa15.15■□□□□ 0.02
PTPRK-212ENST00000434424 ZNF710Q8N1W2 664 aa15.14■□□□□ 0.01
PTPRK-212ENST00000434424 SPRYD3Q8NCJ5 442 aa15.12■□□□□ 0.01
PTPRK-212ENST00000434424 RGL2O15211 777 aa15.11■□□□□ 0.01
PTPRK-212ENST00000434424 STK24Q9Y6E0 443 aa15.11■□□□□ 0.01
PTPRK-212ENST00000434424 NLRP6P59044 892 aa15.1■□□□□ 0.01
PTPRK-212ENST00000434424 MFRPQ9BY79 579 aa15.09■□□□□ 0.01
PTPRK-212ENST00000434424 STK25O00506 426 aa15.05■□□□□ -0
PTPRK-212ENST00000434424 ERBB3P21860 1342 aa15.03■□□□□ -0
PTPRK-212ENST00000434424 RIMBP2O15034 1052 aa15.03■□□□□ -0
PTPRK-212ENST00000434424 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
PTPRK-212ENST00000434424 GPR153Q6NV75 609 aa15.02■□□□□ -0
PTPRK-212ENST00000434424 ZSWIM6Q9HCJ5 1215 aa15□□□□□ -0.01
PTPRK-212ENST00000434424 VARS2Q5ST30 1063 aaKnown RBP14.98□□□□□ -0.01
PTPRK-212ENST00000434424 CHGAP10645 457 aaKnown RBP14.96□□□□□ -0.01
PTPRK-212ENST00000434424 KIF3CO14782 793 aa14.94□□□□□ -0.02
PTPRK-212ENST00000434424 ARSIQ5FYB1 569 aa14.93□□□□□ -0.02
PTPRK-212ENST00000434424 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPRK-212ENST00000434424 C2orf72A6NCS6 295 aa14.89□□□□□ -0.03
PTPRK-212ENST00000434424 ZNF687Q8N1G0 1237 aa14.86□□□□□ -0.03
PTPRK-212ENST00000434424 PPP1R37O75864 691 aa14.85□□□□□ -0.03
PTPRK-212ENST00000434424 NBR1Q14596 966 aa14.84□□□□□ -0.03
PTPRK-212ENST00000434424 DNAJC5Q9H3Z4 198 aa14.8□□□□□ -0.04
PTPRK-212ENST00000434424 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
PTPRK-212ENST00000434424 HS6ST3Q8IZP7 471 aa14.78□□□□□ -0.04
PTPRK-212ENST00000434424 NUDT7P0C024 238 aa14.73□□□□□ -0.05
PTPRK-212ENST00000434424 TMC2Q8TDI7 906 aa14.73□□□□□ -0.05
PTPRK-212ENST00000434424 SLC34A2O95436 690 aa14.72□□□□□ -0.05
PTPRK-212ENST00000434424 PCDHGA4Q9Y5G9 962 aa14.72□□□□□ -0.05
PTPRK-212ENST00000434424 RNF166Q96A37 237 aaPredicted RBP14.69□□□□□ -0.06
PTPRK-212ENST00000434424 MYT1LQ9UL68 1186 aa14.67□□□□□ -0.06
PTPRK-212ENST00000434424 LHX6Q9UPM6 363 aa14.67□□□□□ -0.06
PTPRK-212ENST00000434424 POTEEQ6S8J3 1075 aa14.64□□□□□ -0.07
PTPRK-212ENST00000434424 ANKRD13DQ6ZTN6 518 aa14.63□□□□□ -0.07
PTPRK-212ENST00000434424 LSM11P83369 360 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTPRK-212ENST00000434424 KDM4FA0A1W2PPD8 638 aa14.6□□□□□ -0.07
PTPRK-212ENST00000434424 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
PTPRK-212ENST00000434424 AXIN2Q9Y2T1 843 aa14.58□□□□□ -0.08
PTPRK-212ENST00000434424 FOXK1P85037 733 aa14.57□□□□□ -0.08
PTPRK-212ENST00000434424 PTGER2P43116 358 aa14.56□□□□□ -0.08
PTPRK-212ENST00000434424 GPHNQ9NQX3 736 aaPredicted RBP14.56□□□□□ -0.08
PTPRK-212ENST00000434424 PBX2P40425 430 aa14.55□□□□□ -0.08
PTPRK-212ENST00000434424 PLPP6Q8IY26 295 aa14.55□□□□□ -0.08
PTPRK-212ENST00000434424 PTCD2Q8WV60 388 aaKnown RBP14.55□□□□□ -0.08
PTPRK-212ENST00000434424 DSG2Q14126 1118 aa14.53□□□□□ -0.08
PTPRK-212ENST00000434424 GTPBP6O43824 516 aaPredicted RBP14.51□□□□□ -0.09
PTPRK-212ENST00000434424 ARHGAP33O14559 1287 aa14.43□□□□□ -0.1
PTPRK-212ENST00000434424 PSDA5PKW4 1024 aaPredicted RBP14.42□□□□□ -0.1
PTPRK-212ENST00000434424 TIMELESSQ9UNS1 1208 aa14.42□□□□□ -0.1
PTPRK-212ENST00000434424 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
PTPRK-212ENST00000434424 TULP1O00294 542 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-212ENST00000434424 CRISPLD2Q9H0B8 497 aa14.4□□□□□ -0.1
PTPRK-212ENST00000434424 DMRTA1Q5VZB9 504 aa14.39□□□□□ -0.11
PTPRK-212ENST00000434424 ADGRD1Q6QNK2 874 aa14.39□□□□□ -0.11
PTPRK-212ENST00000434424 PSEN2P49810 448 aa14.38□□□□□ -0.11
PTPRK-212ENST00000434424 OXER1Q8TDS5 423 aa14.37□□□□□ -0.11
PTPRK-212ENST00000434424 RYDENQ9NUL5 291 aaKnown RBP14.37□□□□□ -0.11
PTPRK-212ENST00000434424 TBC1D12O60347 775 aa14.35□□□□□ -0.11
PTPRK-212ENST00000434424 NCKAP5LQ9HCH0 1330 aa14.35□□□□□ -0.11
PTPRK-212ENST00000434424 ERICH6Q7L0X2 663 aa14.34□□□□□ -0.11
PTPRK-212ENST00000434424 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.12
PTPRK-212ENST00000434424 HRO43593 1189 aa14.32□□□□□ -0.12
PTPRK-212ENST00000434424 UPF1Q92900 1129 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPRK-212ENST00000434424 TK2O00142 265 aa14.31□□□□□ -0.12
PTPRK-212ENST00000434424 PPP1R15BQ5SWA1 713 aa14.31□□□□□ -0.12
PTPRK-212ENST00000434424 P3H3Q8IVL6 736 aa14.28□□□□□ -0.12
PTPRK-212ENST00000434424 TMEM132AQ24JP5 1023 aa14.27□□□□□ -0.13
PTPRK-212ENST00000434424 KCNK17Q96T54 332 aa14.25□□□□□ -0.13
PTPRK-212ENST00000434424 PDE4AP27815 886 aa14.24□□□□□ -0.13
PTPRK-212ENST00000434424 HCSTQ9UBK5 93 aa14.22□□□□□ -0.13
PTPRK-212ENST00000434424 ZNF454Q8N9F8 522 aa14.21□□□□□ -0.13
PTPRK-212ENST00000434424 FOSBP53539 338 aa14.19□□□□□ -0.14
PTPRK-212ENST00000434424 LARP6Q9BRS8 491 aaKnown RBP14.18□□□□□ -0.14
PTPRK-212ENST00000434424 ANO8Q9HCE9 1232 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-212ENST00000434424 VPS9D1Q9Y2B5 631 aa14.18□□□□□ -0.14
PTPRK-212ENST00000434424 BCL2L12Q9HB09 334 aa14.17□□□□□ -0.14
PTPRK-212ENST00000434424 WDR70Q9NW82 654 aa14.16□□□□□ -0.14
PTPRK-212ENST00000434424 MFSD10Q14728 455 aa14.15□□□□□ -0.14
PTPRK-212ENST00000434424 PLA2G2EQ9NZK7 142 aa14.15□□□□□ -0.14
PTPRK-212ENST00000434424 EVI5O60447 810 aa14.14□□□□□ -0.15
PTPRK-212ENST00000434424 KCTD12Q96CX2 325 aaKnown RBP14.14□□□□□ -0.15
PTPRK-212ENST00000434424 DDX27Q96GQ7 796 aaKnown RBP14.14□□□□□ -0.15
PTPRK-212ENST00000434424 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
PTPRK-212ENST00000434424 KCNH8Q96L42 1107 aa14.12□□□□□ -0.15
PTPRK-212ENST00000434424 ARXQ96QS3 562 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms