RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 CCDC180Q9P1Z9 1646 aa14.49□□□□□ -0.09
SEC16A-206ENST00000431893 ITPRIPQ8IWB1 547 aa14.48□□□□□ -0.09
SEC16A-206ENST00000431893 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
SEC16A-206ENST00000431893 ZNF330Q9Y3S2 320 aaPredicted RBP14.48□□□□□ -0.09
SEC16A-206ENST00000431893 DCAF11Q8TEB1 546 aa14.48□□□□□ -0.09
SEC16A-206ENST00000431893 PLEKHD1A6NEE1 506 aa14.47□□□□□ -0.09
SEC16A-206ENST00000431893 MS4A1P11836 297 aa14.47□□□□□ -0.09
SEC16A-206ENST00000431893 GBP4Q96PP9 640 aa14.47□□□□□ -0.09
SEC16A-206ENST00000431893 A0A0U1RQG5 324 aaPredicted RBP14.46□□□□□ -0.09
SEC16A-206ENST00000431893 SRPK2P78362 688 aaKnown RBP14.46□□□□□ -0.1
SEC16A-206ENST00000431893 GOLGA6L3A6NEY3 463 aa14.46□□□□□ -0.1
SEC16A-206ENST00000431893 CHMP4BQ9H444 224 aaKnown RBP14.46□□□□□ -0.1
SEC16A-206ENST00000431893 MORC1Q86VD1 984 aa14.45□□□□□ -0.1
SEC16A-206ENST00000431893 KIAA1211Q6ZU35 1233 aa14.44□□□□□ -0.1
SEC16A-206ENST00000431893 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
SEC16A-206ENST00000431893 FOXD1Q16676 465 aa14.43□□□□□ -0.1
SEC16A-206ENST00000431893 TMF1P82094 1093 aa14.42□□□□□ -0.1
SEC16A-206ENST00000431893 STK26Q9P289 416 aa14.42□□□□□ -0.1
SEC16A-206ENST00000431893 TSHZ2Q9NRE2 1034 aa14.42□□□□□ -0.1
SEC16A-206ENST00000431893 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
SEC16A-206ENST00000431893 GOLGA3Q08378 1498 aa14.41□□□□□ -0.1
SEC16A-206ENST00000431893 SLC4A3P48751 1232 aa14.41□□□□□ -0.1
SEC16A-206ENST00000431893 MLECQ14165 292 aa14.41□□□□□ -0.1
SEC16A-206ENST00000431893 FBXO3Q9UK99 471 aa14.4□□□□□ -0.1
SEC16A-206ENST00000431893 FOXD4L6Q3SYB3 417 aaPredicted RBP14.4□□□□□ -0.1
SEC16A-206ENST00000431893 FOXD4L3Q6VB84 417 aaPredicted RBP14.4□□□□□ -0.1
SEC16A-206ENST00000431893 TRIM6-TRIM34B2RNG4 842 aa14.4□□□□□ -0.1
SEC16A-206ENST00000431893 PATL2C9JE40 543 aaKnown RBP14.4□□□□□ -0.1
SEC16A-206ENST00000431893 RTF1Q92541 710 aaKnown RBP14.4□□□□□ -0.1
SEC16A-206ENST00000431893 RCAN3Q9UKA8 241 aa14.39□□□□□ -0.11
SEC16A-206ENST00000431893 CHMP3Q9Y3E7 222 aa14.39□□□□□ -0.11
SEC16A-206ENST00000431893 CCDC146Q8IYE0 955 aa14.38□□□□□ -0.11
SEC16A-206ENST00000431893 GOLGA6L1Q8N7Z2 621 aa14.38□□□□□ -0.11
SEC16A-206ENST00000431893 CLUAP1Q96AJ1 413 aa14.36□□□□□ -0.11
SEC16A-206ENST00000431893 CCDC9Q9Y3X0 531 aaKnown RBP14.36□□□□□ -0.11
SEC16A-206ENST00000431893 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
SEC16A-206ENST00000431893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.35□□□□□ -0.11
SEC16A-206ENST00000431893 TPM4P67936 248 aa14.35□□□□□ -0.11
SEC16A-206ENST00000431893 VSIG10Q8N0Z9 540 aa14.35□□□□□ -0.11
SEC16A-206ENST00000431893 IPO9Q96P70 1041 aaKnown RBP14.35□□□□□ -0.11
SEC16A-206ENST00000431893 HSP90AA2PQ14568 343 aaPredicted RBP14.34□□□□□ -0.11
SEC16A-206ENST00000431893 BCL11BQ9C0K0 894 aaPredicted RBP14.34□□□□□ -0.11
SEC16A-206ENST00000431893 SYAP1Q96A49 352 aaPredicted RBP14.34□□□□□ -0.11
SEC16A-206ENST00000431893 RASSF8Q8NHQ8 419 aa14.34□□□□□ -0.11
SEC16A-206ENST00000431893 TIMELESSQ9UNS1 1208 aa14.34□□□□□ -0.11
SEC16A-206ENST00000431893 U2AF1L5P0DN76 240 aaPredicted RBP14.33□□□□□ -0.12
SEC16A-206ENST00000431893 U2AF1Q01081 240 aaKnown RBP eCLIP14.33□□□□□ -0.12
SEC16A-206ENST00000431893 CALD1Q05682 793 aaKnown RBP14.33□□□□□ -0.12
SEC16A-206ENST00000431893 RWDD1Q9H446 243 aaPredicted RBP14.33□□□□□ -0.12
SEC16A-206ENST00000431893 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.12
SEC16A-206ENST00000431893 SLC4A10Q6U841 1118 aa14.33□□□□□ -0.12
SEC16A-206ENST00000431893 WWC1Q8IX03 1113 aa14.32□□□□□ -0.12
SEC16A-206ENST00000431893 PES1O00541 588 aaKnown RBP14.32□□□□□ -0.12
SEC16A-206ENST00000431893 PTMSP20962 102 aa14.32□□□□□ -0.12
SEC16A-206ENST00000431893 KTN1Q86UP2 1357 aaKnown RBP14.32□□□□□ -0.12
SEC16A-206ENST00000431893 GORABQ5T7V8 394 aa14.3□□□□□ -0.12
SEC16A-206ENST00000431893 TCERG1O14776 1098 aaKnown RBP14.3□□□□□ -0.12
SEC16A-206ENST00000431893 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
SEC16A-206ENST00000431893 IPO8O15397 1037 aaKnown RBP14.29□□□□□ -0.12
SEC16A-206ENST00000431893 VPS53Q5VIR6 699 aa14.28□□□□□ -0.12
SEC16A-206ENST00000431893 ZNF592Q92610 1267 aa14.28□□□□□ -0.12
SEC16A-206ENST00000431893 HTATSF1O43719 755 aaKnown RBP14.28□□□□□ -0.12
SEC16A-206ENST00000431893 BAZ1BQ9UIG0 1483 aaKnown RBP14.28□□□□□ -0.12
SEC16A-206ENST00000431893 CCER2I3L3R5 266 aa14.27□□□□□ -0.12
SEC16A-206ENST00000431893 TOMM22Q9NS69 142 aa14.27□□□□□ -0.12
SEC16A-206ENST00000431893 CSB-PGBD3P0DP91 1061 aa14.26□□□□□ -0.13
SEC16A-206ENST00000431893 ZNF771Q7L3S4 317 aaPredicted RBP14.26□□□□□ -0.13
SEC16A-206ENST00000431893 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
SEC16A-206ENST00000431893 NUTM2DQ5VT03 806 aaPredicted RBP14.25□□□□□ -0.13
SEC16A-206ENST00000431893 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
SEC16A-206ENST00000431893 PMFBP1Q8TBY8 1022 aa14.25□□□□□ -0.13
SEC16A-206ENST00000431893 CFAP44Q96MT7 982 aa14.25□□□□□ -0.13
SEC16A-206ENST00000431893 PLIN1O60240 522 aa14.24□□□□□ -0.13
SEC16A-206ENST00000431893 RRP7AQ9Y3A4 280 aaKnown RBP14.24□□□□□ -0.13
SEC16A-206ENST00000431893 ROCK2O75116 1388 aaKnown RBP14.23□□□□□ -0.13
SEC16A-206ENST00000431893 TPM3P06753 285 aa14.23□□□□□ -0.13
SEC16A-206ENST00000431893 CCNB3Q8WWL7 1395 aa14.23□□□□□ -0.13
SEC16A-206ENST00000431893 HDGFL2Q7Z4V5 671 aaPredicted RBP14.22□□□□□ -0.13
SEC16A-206ENST00000431893 FBXW7Q969H0 707 aa14.22□□□□□ -0.13
SEC16A-206ENST00000431893 SETQ01105 290 aaPredicted RBP14.22□□□□□ -0.13
SEC16A-206ENST00000431893 RILPL2Q969X0 211 aa14.22□□□□□ -0.13
SEC16A-206ENST00000431893 GPATCH3Q96I76 525 aa14.22□□□□□ -0.13
SEC16A-206ENST00000431893 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
SEC16A-206ENST00000431893 BCL2L13Q9BXK5 485 aa14.21□□□□□ -0.13
SEC16A-206ENST00000431893 TPD52L1Q16890 204 aaPredicted RBP14.21□□□□□ -0.13
SEC16A-206ENST00000431893 KIF16BQ96L93 1317 aa14.2□□□□□ -0.14
SEC16A-206ENST00000431893 GGT6Q6P531 493 aa14.2□□□□□ -0.14
SEC16A-206ENST00000431893 PKD2Q13563 968 aa14.2□□□□□ -0.14
SEC16A-206ENST00000431893 CSPP1Q1MSJ5 1256 aa14.19□□□□□ -0.14
SEC16A-206ENST00000431893 LTV1Q96GA3 475 aaPredicted RBP14.19□□□□□ -0.14
SEC16A-206ENST00000431893 H3BQV1 296 aa14.19□□□□□ -0.14
SEC16A-206ENST00000431893 IFFO2Q5TF58 517 aa14.19□□□□□ -0.14
SEC16A-206ENST00000431893 MARCH6O60337 910 aa14.19□□□□□ -0.14
SEC16A-206ENST00000431893 STK31Q9BXU1 1019 aa14.19□□□□□ -0.14
SEC16A-206ENST00000431893 DDX49Q9Y6V7 483 aaKnown RBP14.19□□□□□ -0.14
SEC16A-206ENST00000431893 CEP89Q96ST8 783 aa14.19□□□□□ -0.14
SEC16A-206ENST00000431893 KANK1Q14678 1352 aa14.18□□□□□ -0.14
SEC16A-206ENST00000431893 FAM13BQ9NYF5 915 aa14.18□□□□□ -0.14
SEC16A-206ENST00000431893 PHF14O94880 888 aa14.18□□□□□ -0.14
SEC16A-206ENST00000431893 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms