RNA–Protein interactions for RNA: ENST00000430825.3

LMBR1-206, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-206ENST00000430825 SCAPERQ9BY12 1400 aa28.3■■■□□ 2.12
LMBR1-206ENST00000430825 PLCH2O75038 1416 aa28.28■■■□□ 2.12
LMBR1-206ENST00000430825 ATP10AO60312 1499 aa28.26■■■□□ 2.11
LMBR1-206ENST00000430825 ARHGEF12Q9NZN5 1544 aa28.25■■■□□ 2.11
LMBR1-206ENST00000430825 DMRT2Q9Y5R5 561 aa28.23■■■□□ 2.11
LMBR1-206ENST00000430825 C9orf84Q5VXU9 1444 aa28.23■■■□□ 2.11
LMBR1-206ENST00000430825 EFCAB2Q5VUJ9 269 aa28.21■■■□□ 2.11
LMBR1-206ENST00000430825 PREX1Q8TCU6 1659 aa28.21■■■□□ 2.11
LMBR1-206ENST00000430825 CDK13Q14004 1512 aaKnown RBP28.21■■■□□ 2.11
LMBR1-206ENST00000430825 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
LMBR1-206ENST00000430825 CEBPAP49715 358 aaPredicted RBP28.14■■■□□ 2.1
LMBR1-206ENST00000430825 CDK11AQ9UQ88 783 aaPredicted RBP28.14■■■□□ 2.1
LMBR1-206ENST00000430825 DISP3Q9P2K9 1392 aa28.13■■■□□ 2.09
LMBR1-206ENST00000430825 ZNF518AQ6AHZ1 1483 aa28.12■■■□□ 2.09
LMBR1-206ENST00000430825 UHRF1BP1Q6BDS2 1440 aa28.11■■■□□ 2.09
LMBR1-206ENST00000430825 MYO5CQ9NQX4 1742 aa28.1■■■□□ 2.09
LMBR1-206ENST00000430825 SETD1BQ9UPS6 1966 aaKnown RBP28.1■■■□□ 2.09
LMBR1-206ENST00000430825 FMN1Q68DA7 1419 aa28.08■■■□□ 2.09
LMBR1-206ENST00000430825 ATP1B4Q9UN42 357 aaPredicted RBP28.07■■■□□ 2.08
LMBR1-206ENST00000430825 STRCQ7RTU9 1775 aa28.06■■■□□ 2.08
LMBR1-206ENST00000430825 SOCS7O14512 581 aa28.05■■■□□ 2.08
LMBR1-206ENST00000430825 KDM5CP41229 1560 aa28.04■■■□□ 2.08
LMBR1-206ENST00000430825 ILDR2Q71H61 639 aa28.04■■■□□ 2.08
LMBR1-206ENST00000430825 AFAP1Q8N556 730 aa28.04■■■□□ 2.08
LMBR1-206ENST00000430825 MYT1LQ9UL68 1186 aa28.03■■■□□ 2.08
LMBR1-206ENST00000430825 PTPRTO14522 1441 aa28.02■■■□□ 2.08
LMBR1-206ENST00000430825 KIF14Q15058 1648 aa28.01■■■□□ 2.07
LMBR1-206ENST00000430825 ARHGAP5Q13017 1502 aa28.01■■■□□ 2.07
LMBR1-206ENST00000430825 REREQ9P2R6 1566 aa27.99■■■□□ 2.07
LMBR1-206ENST00000430825 TROQ12816 1431 aaPredicted RBP27.99■■■□□ 2.07
LMBR1-206ENST00000430825 CLIP1P30622 1438 aa27.98■■■□□ 2.07
LMBR1-206ENST00000430825 ESF1Q9H501 851 aaKnown RBP27.97■■■□□ 2.07
LMBR1-206ENST00000430825 DIP2CQ9Y2E4 1556 aa27.97■■■□□ 2.07
LMBR1-206ENST00000430825 MLH3Q9UHC1 1453 aa27.95■■■□□ 2.06
LMBR1-206ENST00000430825 UBTFP17480 764 aaKnown RBP27.94■■■□□ 2.06
LMBR1-206ENST00000430825 TRAPPC8Q9Y2L5 1435 aa27.92■■■□□ 2.06
LMBR1-206ENST00000430825 AGLP35573 1532 aa27.92■■■□□ 2.06
LMBR1-206ENST00000430825 ARHGAP35Q9NRY4 1499 aa27.91■■■□□ 2.06
LMBR1-206ENST00000430825 C3P01024 1663 aa27.91■■■□□ 2.06
LMBR1-206ENST00000430825 SPATA31D1Q6ZQQ2 1576 aa27.89■■■□□ 2.05
LMBR1-206ENST00000430825 IQSEC2Q5JU85 1478 aa27.89■■■□□ 2.05
LMBR1-206ENST00000430825 ABCA6Q8N139 1617 aa27.89■■■□□ 2.05
LMBR1-206ENST00000430825 CNTLNQ9NXG0 1405 aa27.87■■■□□ 2.05
LMBR1-206ENST00000430825 LTBP4Q8N2S1 1624 aa27.85■■■□□ 2.05
LMBR1-206ENST00000430825 CDC42BPBQ9Y5S2 1711 aa27.84■■■□□ 2.05
LMBR1-206ENST00000430825 NCOA1Q15788 1441 aa27.84■■■□□ 2.05
LMBR1-206ENST00000430825 ABCC1P33527 1531 aa27.82■■■□□ 2.04
LMBR1-206ENST00000430825 EHMT2Q96KQ7 1210 aa27.8■■■□□ 2.04
LMBR1-206ENST00000430825 PREX2Q70Z35 1606 aa27.79■■■□□ 2.04
LMBR1-206ENST00000430825 NPATQ14207 1427 aa27.77■■■□□ 2.04
LMBR1-206ENST00000430825 ITSN2Q9NZM3 1697 aa27.76■■■□□ 2.03
LMBR1-206ENST00000430825 LRRIQ1Q96JM4 1722 aa27.75■■■□□ 2.03
LMBR1-206ENST00000430825 KIDINS220Q9ULH0 1771 aa27.74■■■□□ 2.03
LMBR1-206ENST00000430825 CCDC18Q5T9S5 1454 aa27.73■■■□□ 2.03
LMBR1-206ENST00000430825 CAMSAP1Q5T5Y3 1602 aa27.72■■■□□ 2.03
LMBR1-206ENST00000430825 MROH2AA6NES4 1674 aa27.7■■■□□ 2.02
LMBR1-206ENST00000430825 ZMYM3Q14202 1370 aa27.7■■■□□ 2.02
LMBR1-206ENST00000430825 CASKIN1Q8WXD9 1431 aa27.68■■■□□ 2.02
LMBR1-206ENST00000430825 SAMD9LQ8IVG5 1584 aa27.65■■■□□ 2.02
LMBR1-206ENST00000430825 PKD2Q13563 968 aa27.65■■■□□ 2.02
LMBR1-206ENST00000430825 NCKAP5LQ9HCH0 1330 aa27.65■■■□□ 2.02
LMBR1-206ENST00000430825 SPAG9O60271 1321 aaKnown RBP27.64■■■□□ 2.01
LMBR1-206ENST00000430825 UBAP1LF5GYI3 381 aa27.63■■■□□ 2.01
LMBR1-206ENST00000430825 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
LMBR1-206ENST00000430825 ZNF335Q9H4Z2 1342 aaPredicted RBP27.63■■■□□ 2.01
LMBR1-206ENST00000430825 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
LMBR1-206ENST00000430825 PLA2R1Q13018 1463 aa27.62■■■□□ 2.01
LMBR1-206ENST00000430825 SYCP2Q9BX26 1530 aa27.57■■■□□ 2
LMBR1-206ENST00000430825 ZNF142P52746 1687 aaPredicted RBP27.56■■■□□ 2
LMBR1-206ENST00000430825 HNRNPMP52272 730 aaKnown RBP eCLIP27.56■■■□□ 2
LMBR1-206ENST00000430825 SUPT6HQ7KZ85 1726 aaKnown RBP27.55■■■□□ 2
LMBR1-206ENST00000430825 KIAA1107Q9UPP5 1409 aa27.55■■■□□ 2
LMBR1-206ENST00000430825 TCOF1Q13428 1488 aaKnown RBP27.55■■■□□ 2
LMBR1-206ENST00000430825 ATP7AQ04656 1500 aa27.54■■■□□ 2
LMBR1-206ENST00000430825 PTPRKQ15262 1439 aa27.54■■■□□ 2
LMBR1-206ENST00000430825 MYO3AQ8NEV4 1616 aa27.54■■■□□ 2
LMBR1-206ENST00000430825 GPATCH8Q9UKJ3 1502 aaKnown RBP27.54■■■□□ 2
LMBR1-206ENST00000430825 CEP170BQ9Y4F5 1589 aaPredicted RBP27.53■■■□□ 2
LMBR1-206ENST00000430825 A2MP01023 1474 aa27.53■■■□□ 2
LMBR1-206ENST00000430825 PLEKHH2Q8IVE3 1493 aa27.53■■■□□ 2
LMBR1-206ENST00000430825 FYCO1Q9BQS8 1478 aa27.53■■■□□ 2
LMBR1-206ENST00000430825 PPP6R1Q9UPN7 881 aa27.53■■■□□ 2
LMBR1-206ENST00000430825 CLTCQ00610 1675 aaKnown RBP27.52■■■□□ 2
LMBR1-206ENST00000430825 PLXNC1O60486 1568 aa27.52■■■□□ 2
LMBR1-206ENST00000430825 GGT6Q6P531 493 aa27.5■■□□□ 1.99
LMBR1-206ENST00000430825 CFDP1Q9UEE9 299 aaPredicted RBP27.49■■□□□ 1.99
LMBR1-206ENST00000430825 INO80Q9ULG1 1556 aaPredicted RBP27.48■■□□□ 1.99
LMBR1-206ENST00000430825 CCNB3Q8WWL7 1395 aa27.43■■□□□ 1.98
LMBR1-206ENST00000430825 A2ML1A8K2U0 1454 aa27.43■■□□□ 1.98
LMBR1-206ENST00000430825 ADGBQ8N7X0 1667 aa27.38■■□□□ 1.97
LMBR1-206ENST00000430825 TOM1O60784 492 aa27.38■■□□□ 1.97
LMBR1-206ENST00000430825 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
LMBR1-206ENST00000430825 HSPA1LP34931 641 aa27.36■■□□□ 1.97
LMBR1-206ENST00000430825 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
LMBR1-206ENST00000430825 CPS1P31327 1500 aa27.36■■□□□ 1.97
LMBR1-206ENST00000430825 PIP4K2BP78356 416 aa27.33■■□□□ 1.97
LMBR1-206ENST00000430825 MTUS2Q5JR59 1369 aa27.32■■□□□ 1.96
LMBR1-206ENST00000430825 RTEL1-TNFRSF6BF6WH68 1400 aa27.32■■□□□ 1.96
LMBR1-206ENST00000430825 SHANK2Q9UPX8 1470 aa27.31■■□□□ 1.96
LMBR1-206ENST00000430825 MED1Q15648 1581 aaPredicted RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms