RNA–Protein interactions for RNA: ENST00000429976.5

TRANK1-201, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRANK1, Length 10,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-201ENST00000429976 FOXD1Q16676 465 aa12.61□□□□□ -0.39
TRANK1-201ENST00000429976 EIF4G1Q04637 1599 aaKnown RBP12.61□□□□□ -0.39
TRANK1-201ENST00000429976 GNL2Q13823 731 aaKnown RBP12.61□□□□□ -0.39
TRANK1-201ENST00000429976 MS4A1P11836 297 aa12.6□□□□□ -0.39
TRANK1-201ENST00000429976 MORC1Q86VD1 984 aa12.59□□□□□ -0.39
TRANK1-201ENST00000429976 ITPRIPQ8IWB1 547 aa12.59□□□□□ -0.39
TRANK1-201ENST00000429976 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
TRANK1-201ENST00000429976 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
TRANK1-201ENST00000429976 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
TRANK1-201ENST00000429976 MFAP1P55081 439 aaKnown RBP12.58□□□□□ -0.4
TRANK1-201ENST00000429976 TMF1P82094 1093 aa12.58□□□□□ -0.4
TRANK1-201ENST00000429976 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
TRANK1-201ENST00000429976 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
TRANK1-201ENST00000429976 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
TRANK1-201ENST00000429976 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.4
TRANK1-201ENST00000429976 TNIKQ9UKE5 1360 aa12.57□□□□□ -0.4
TRANK1-201ENST00000429976 SRPK2P78362 688 aaKnown RBP12.57□□□□□ -0.4
TRANK1-201ENST00000429976 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
TRANK1-201ENST00000429976 EEA1Q15075 1411 aa12.55□□□□□ -0.4
TRANK1-201ENST00000429976 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
TRANK1-201ENST00000429976 CCNB3Q8WWL7 1395 aa12.55□□□□□ -0.4
TRANK1-201ENST00000429976 FOXD4L5Q5VV16 416 aaPredicted RBP12.55□□□□□ -0.4
TRANK1-201ENST00000429976 FOXD4L4Q8WXT5 416 aaPredicted RBP12.55□□□□□ -0.4
TRANK1-201ENST00000429976 KIAA2012Q0VF49 1180 aa12.55□□□□□ -0.4
TRANK1-201ENST00000429976 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
TRANK1-201ENST00000429976 GOLGA6L3A6NEY3 463 aa12.53□□□□□ -0.4
TRANK1-201ENST00000429976 KIF27Q86VH2 1401 aa12.53□□□□□ -0.4
TRANK1-201ENST00000429976 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
TRANK1-201ENST00000429976 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
TRANK1-201ENST00000429976 KIAA1211Q6ZU35 1233 aa12.52□□□□□ -0.4
TRANK1-201ENST00000429976 STK26Q9P289 416 aa12.52□□□□□ -0.4
TRANK1-201ENST00000429976 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.41
TRANK1-201ENST00000429976 CCDC146Q8IYE0 955 aa12.51□□□□□ -0.41
TRANK1-201ENST00000429976 ZNF330Q9Y3S2 320 aaPredicted RBP12.5□□□□□ -0.41
TRANK1-201ENST00000429976 MLECQ14165 292 aa12.5□□□□□ -0.41
TRANK1-201ENST00000429976 SETD5Q9C0A6 1442 aa12.49□□□□□ -0.41
TRANK1-201ENST00000429976 IPO9Q96P70 1041 aaKnown RBP12.49□□□□□ -0.41
TRANK1-201ENST00000429976 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
TRANK1-201ENST00000429976 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
TRANK1-201ENST00000429976 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
TRANK1-201ENST00000429976 RWDD1Q9H446 243 aaPredicted RBP12.48□□□□□ -0.41
TRANK1-201ENST00000429976 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
TRANK1-201ENST00000429976 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRANK1-201ENST00000429976 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
TRANK1-201ENST00000429976 CREBRFQ8IUR6 639 aa12.47□□□□□ -0.41
TRANK1-201ENST00000429976 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
TRANK1-201ENST00000429976 TCERG1O14776 1098 aaKnown RBP12.47□□□□□ -0.41
TRANK1-201ENST00000429976 ARHGAP35Q9NRY4 1499 aa12.46□□□□□ -0.41
TRANK1-201ENST00000429976 KANK1Q14678 1352 aa12.46□□□□□ -0.41
TRANK1-201ENST00000429976 GOLGA6L1Q8N7Z2 621 aa12.46□□□□□ -0.42
TRANK1-201ENST00000429976 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
TRANK1-201ENST00000429976 PTMSP20962 102 aa12.45□□□□□ -0.42
TRANK1-201ENST00000429976 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
TRANK1-201ENST00000429976 SOGA1O94964 1423 aa12.45□□□□□ -0.42
TRANK1-201ENST00000429976 PKD2Q13563 968 aa12.45□□□□□ -0.42
TRANK1-201ENST00000429976 SYAP1Q96A49 352 aaPredicted RBP12.44□□□□□ -0.42
TRANK1-201ENST00000429976 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
TRANK1-201ENST00000429976 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
TRANK1-201ENST00000429976 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
TRANK1-201ENST00000429976 SMC4Q9NTJ3 1288 aa12.43□□□□□ -0.42
TRANK1-201ENST00000429976 KANK4Q5T7N3 995 aaPredicted RBP12.42□□□□□ -0.42
TRANK1-201ENST00000429976 FOXD4L6Q3SYB3 417 aaPredicted RBP12.41□□□□□ -0.42
TRANK1-201ENST00000429976 FOXD4L3Q6VB84 417 aaPredicted RBP12.41□□□□□ -0.42
TRANK1-201ENST00000429976 WWC1Q8IX03 1113 aa12.41□□□□□ -0.42
TRANK1-201ENST00000429976 ABCC8Q09428 1581 aa12.4□□□□□ -0.42
TRANK1-201ENST00000429976 RAB3GAP2Q9H2M9 1393 aa12.4□□□□□ -0.42
TRANK1-201ENST00000429976 SLC4A10Q6U841 1118 aa12.4□□□□□ -0.42
TRANK1-201ENST00000429976 TPM4P67936 248 aa12.4□□□□□ -0.42
TRANK1-201ENST00000429976 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.43
TRANK1-201ENST00000429976 PMFBP1Q8TBY8 1022 aa12.39□□□□□ -0.43
TRANK1-201ENST00000429976 NUTM2DQ5VT03 806 aaPredicted RBP12.39□□□□□ -0.43
TRANK1-201ENST00000429976 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
TRANK1-201ENST00000429976 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
TRANK1-201ENST00000429976 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
TRANK1-201ENST00000429976 CALD1Q05682 793 aaKnown RBP12.39□□□□□ -0.43
TRANK1-201ENST00000429976 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
TRANK1-201ENST00000429976 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
TRANK1-201ENST00000429976 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
TRANK1-201ENST00000429976 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
TRANK1-201ENST00000429976 PLIN1O60240 522 aa12.38□□□□□ -0.43
TRANK1-201ENST00000429976 RALBP1Q15311 655 aa12.38□□□□□ -0.43
TRANK1-201ENST00000429976 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
TRANK1-201ENST00000429976 HTATSF1O43719 755 aaKnown RBP12.38□□□□□ -0.43
TRANK1-201ENST00000429976 RASSF8Q8NHQ8 419 aa12.37□□□□□ -0.43
TRANK1-201ENST00000429976 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
TRANK1-201ENST00000429976 GPATCH3Q96I76 525 aa12.36□□□□□ -0.43
TRANK1-201ENST00000429976 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
TRANK1-201ENST00000429976 CSB-PGBD3P0DP91 1061 aa12.36□□□□□ -0.43
TRANK1-201ENST00000429976 CUX2O14529 1486 aa12.36□□□□□ -0.43
TRANK1-201ENST00000429976 GGT6Q6P531 493 aa12.35□□□□□ -0.43
TRANK1-201ENST00000429976 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
TRANK1-201ENST00000429976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
TRANK1-201ENST00000429976 CCAR2Q8N163 923 aaKnown RBP12.34□□□□□ -0.43
TRANK1-201ENST00000429976 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
TRANK1-201ENST00000429976 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
TRANK1-201ENST00000429976 MPHOSPH9Q99550 1183 aa12.33□□□□□ -0.44
TRANK1-201ENST00000429976 BCL2L13Q9BXK5 485 aa12.33□□□□□ -0.44
TRANK1-201ENST00000429976 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
TRANK1-201ENST00000429976 TOMM22Q9NS69 142 aa12.33□□□□□ -0.44
TRANK1-201ENST00000429976 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms