RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
HMGB1P9-201ENST00000429856 VGFO15240 615 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P9-201ENST00000429856 ARSIQ5FYB1 569 aa8.45□□□□□ -1.06
HMGB1P9-201ENST00000429856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P9-201ENST00000429856 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P9-201ENST00000429856 PHF8Q9UPP1 1060 aa8.43□□□□□ -1.06
HMGB1P9-201ENST00000429856 MS4A4AQ96JQ5 239 aa8.42□□□□□ -1.06
HMGB1P9-201ENST00000429856 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P9-201ENST00000429856 NLRP6P59044 892 aa8.41□□□□□ -1.06
HMGB1P9-201ENST00000429856 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
HMGB1P9-201ENST00000429856 LSM11P83369 360 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGB1P9-201ENST00000429856 KHSRPQ92945 711 aaKnown RBP eCLIP8.36□□□□□ -1.07
HMGB1P9-201ENST00000429856 RNF25Q96BH1 459 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P9-201ENST00000429856 PBX2P40425 430 aa8.35□□□□□ -1.07
HMGB1P9-201ENST00000429856 FBXO22Q8NEZ5 403 aa8.31□□□□□ -1.08
HMGB1P9-201ENST00000429856 BCL11BQ9C0K0 894 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P9-201ENST00000429856 NUDT7P0C024 238 aa8.3□□□□□ -1.08
HMGB1P9-201ENST00000429856 HCSTQ9UBK5 93 aa8.3□□□□□ -1.08
HMGB1P9-201ENST00000429856 STK24Q9Y6E0 443 aa8.3□□□□□ -1.08
HMGB1P9-201ENST00000429856 C2orf72A6NCS6 295 aa8.29□□□□□ -1.08
HMGB1P9-201ENST00000429856 SLC34A2O95436 690 aa8.29□□□□□ -1.08
HMGB1P9-201ENST00000429856 KIF3CO14782 793 aa8.28□□□□□ -1.08
HMGB1P9-201ENST00000429856 PLA2G2EQ9NZK7 142 aa8.28□□□□□ -1.08
HMGB1P9-201ENST00000429856 LHX6Q9UPM6 363 aa8.28□□□□□ -1.08
HMGB1P9-201ENST00000429856 TMC2Q8TDI7 906 aa8.27□□□□□ -1.09
HMGB1P9-201ENST00000429856 PCDHGA4Q9Y5G9 962 aa8.27□□□□□ -1.09
HMGB1P9-201ENST00000429856 MFRPQ9BY79 579 aa8.26□□□□□ -1.09
HMGB1P9-201ENST00000429856 AXIN2Q9Y2T1 843 aa8.26□□□□□ -1.09
HMGB1P9-201ENST00000429856 PSDA5PKW4 1024 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P9-201ENST00000429856 STK25O00506 426 aa8.25□□□□□ -1.09
HMGB1P9-201ENST00000429856 ARHGAP33O14559 1287 aa8.23□□□□□ -1.09
HMGB1P9-201ENST00000429856 ADGRD1Q6QNK2 874 aa8.21□□□□□ -1.1
HMGB1P9-201ENST00000429856 POTEEQ6S8J3 1075 aa8.21□□□□□ -1.1
HMGB1P9-201ENST00000429856 STAC3Q96MF2 364 aa8.2□□□□□ -1.1
HMGB1P9-201ENST00000429856 TK2O00142 265 aa8.18□□□□□ -1.1
HMGB1P9-201ENST00000429856 ECM2O94769 699 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P9-201ENST00000429856 TBC1D12O60347 775 aa8.14□□□□□ -1.11
HMGB1P9-201ENST00000429856 PTCD2Q8WV60 388 aaKnown RBP8.14□□□□□ -1.11
HMGB1P9-201ENST00000429856 KCNH8Q96L42 1107 aa8.13□□□□□ -1.11
HMGB1P9-201ENST00000429856 PPP4R3BQ5MIZ7 849 aa8.12□□□□□ -1.11
HMGB1P9-201ENST00000429856 KDM4FA0A1W2PPD8 638 aa8.11□□□□□ -1.11
HMGB1P9-201ENST00000429856 HRO43593 1189 aa8.11□□□□□ -1.11
HMGB1P9-201ENST00000429856 PSEN2P49810 448 aa8.11□□□□□ -1.11
HMGB1P9-201ENST00000429856 KCTD12Q96CX2 325 aaKnown RBP8.11□□□□□ -1.11
HMGB1P9-201ENST00000429856 DMRTA1Q5VZB9 504 aa8.1□□□□□ -1.11
HMGB1P9-201ENST00000429856 PPP1R37O75864 691 aa8.08□□□□□ -1.12
HMGB1P9-201ENST00000429856 FOXK1P85037 733 aa8.08□□□□□ -1.12
HMGB1P9-201ENST00000429856 PLPP6Q8IY26 295 aa8.08□□□□□ -1.12
HMGB1P9-201ENST00000429856 GPHNQ9NQX3 736 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P9-201ENST00000429856 RGL2O15211 777 aa8.05□□□□□ -1.12
HMGB1P9-201ENST00000429856 RGS20O76081 388 aa8.05□□□□□ -1.12
HMGB1P9-201ENST00000429856 PTPN5P54829 565 aa8.04□□□□□ -1.12
HMGB1P9-201ENST00000429856 KCNK17Q96T54 332 aa8.04□□□□□ -1.12
HMGB1P9-201ENST00000429856 VPS9D1Q9Y2B5 631 aa8.02□□□□□ -1.13
HMGB1P9-201ENST00000429856 PKD2Q13563 968 aa8.01□□□□□ -1.13
HMGB1P9-201ENST00000429856 DSG2Q14126 1118 aa8.01□□□□□ -1.13
HMGB1P9-201ENST00000429856 GOLGA8CPA6NN73 597 aa8□□□□□ -1.13
HMGB1P9-201ENST00000429856 IFFO2Q5TF58 517 aa8□□□□□ -1.13
HMGB1P9-201ENST00000429856 AMER1Q5JTC6 1135 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P9-201ENST00000429856 SLC4A5Q9BY07 1137 aa7.99□□□□□ -1.13
HMGB1P9-201ENST00000429856 ZNF454Q8N9F8 522 aa7.97□□□□□ -1.13
HMGB1P9-201ENST00000429856 IRX2Q9BZI1 471 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P9-201ENST00000429856 BCL2L12Q9HB09 334 aa7.96□□□□□ -1.14
HMGB1P9-201ENST00000429856 PTPREP23469 700 aa7.95□□□□□ -1.14
HMGB1P9-201ENST00000429856 OXER1Q8TDS5 423 aa7.95□□□□□ -1.14
HMGB1P9-201ENST00000429856 THSD4Q6ZMP0 1018 aa7.94□□□□□ -1.14
HMGB1P9-201ENST00000429856 MRPL50Q8N5N7 158 aaKnown RBP7.94□□□□□ -1.14
HMGB1P9-201ENST00000429856 WNT2BQ93097 391 aa7.94□□□□□ -1.14
HMGB1P9-201ENST00000429856 BHMG1C9JSJ3 638 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P9-201ENST00000429856 UPF1Q92900 1129 aaKnown RBP eCLIP7.93□□□□□ -1.14
HMGB1P9-201ENST00000429856 HS6ST3Q8IZP7 471 aa7.92□□□□□ -1.14
HMGB1P9-201ENST00000429856 A0A0G2JS52 829 aa7.91□□□□□ -1.14
HMGB1P9-201ENST00000429856 FOSBP53539 338 aa7.91□□□□□ -1.14
HMGB1P9-201ENST00000429856 NBPF3Q9H094 633 aa7.91□□□□□ -1.14
HMGB1P9-201ENST00000429856 RYDENQ9NUL5 291 aaKnown RBP7.91□□□□□ -1.14
HMGB1P9-201ENST00000429856 ZBED2Q9BTP6 218 aa7.9□□□□□ -1.14
HMGB1P9-201ENST00000429856 ANO8Q9HCE9 1232 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P9-201ENST00000429856 ZDHHC16Q969W1 377 aa7.88□□□□□ -1.15
HMGB1P9-201ENST00000429856 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
HMGB1P9-201ENST00000429856 PDE4AP27815 886 aa7.87□□□□□ -1.15
HMGB1P9-201ENST00000429856 PPP1R15BQ5SWA1 713 aa7.87□□□□□ -1.15
HMGB1P9-201ENST00000429856 CHGAP10645 457 aaKnown RBP7.86□□□□□ -1.15
HMGB1P9-201ENST00000429856 JPH4Q96JJ6 628 aa7.86□□□□□ -1.15
HMGB1P9-201ENST00000429856 CRISPLD2Q9H0B8 497 aa7.86□□□□□ -1.15
HMGB1P9-201ENST00000429856 EVI5O60447 810 aa7.85□□□□□ -1.15
HMGB1P9-201ENST00000429856 ANKK1Q8NFD2 765 aa7.83□□□□□ -1.16
HMGB1P9-201ENST00000429856 ADAM33Q9BZ11 813 aa7.83□□□□□ -1.16
HMGB1P9-201ENST00000429856 MAP3K9P80192 1104 aa7.82□□□□□ -1.16
HMGB1P9-201ENST00000429856 RABGEF1Q9UJ41 708 aa7.81□□□□□ -1.16
HMGB1P9-201ENST00000429856 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
HMGB1P9-201ENST00000429856 ITGBL1O95965 494 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P9-201ENST00000429856 Q6ZNB5 142 aa7.79□□□□□ -1.16
HMGB1P9-201ENST00000429856 NYAP1Q6ZVC0 841 aa7.79□□□□□ -1.16
HMGB1P9-201ENST00000429856 PPP1R3GB7ZBB8 358 aa7.78□□□□□ -1.16
HMGB1P9-201ENST00000429856 LAPTM4BQ86VI4 370 aa7.78□□□□□ -1.16
HMGB1P9-201ENST00000429856 LARP6Q9BRS8 491 aaKnown RBP7.77□□□□□ -1.17
HMGB1P9-201ENST00000429856 NCKAP5LQ9HCH0 1330 aa7.77□□□□□ -1.17
HMGB1P9-201ENST00000429856 KCNC4Q03721 635 aa7.76□□□□□ -1.17
HMGB1P9-201ENST00000429856 NKX1-1Q15270 411 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P9-201ENST00000429856 FBXW7Q969H0 707 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms