RNA–Protein interactions for RNA: ENST00000429789.6

CHID1-202, Transcript of chitinase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CHID1, Length 1,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-202ENST00000429789 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
CHID1-202ENST00000429789 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
CHID1-202ENST00000429789 FBXO41Q8TF61 875 aa22.98■■□□□ 1.27
CHID1-202ENST00000429789 SIGLEC1Q9BZZ2 1709 aa22.98■■□□□ 1.27
CHID1-202ENST00000429789 EFCAB2Q5VUJ9 269 aa22.97■■□□□ 1.27
CHID1-202ENST00000429789 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
CHID1-202ENST00000429789 PLPPR3Q6T4P5 718 aa22.96■■□□□ 1.27
CHID1-202ENST00000429789 MYO5CQ9NQX4 1742 aa22.96■■□□□ 1.27
CHID1-202ENST00000429789 MLECQ14165 292 aa22.95■■□□□ 1.26
CHID1-202ENST00000429789 KIF14Q15058 1648 aa22.91■■□□□ 1.26
CHID1-202ENST00000429789 ATP10AO60312 1499 aa22.91■■□□□ 1.26
CHID1-202ENST00000429789 TROQ12816 1431 aaPredicted RBP22.91■■□□□ 1.26
CHID1-202ENST00000429789 FER1L4A9Z1Z3 1794 aa22.9■■□□□ 1.26
CHID1-202ENST00000429789 HSPA2P54652 639 aa22.89■■□□□ 1.25
CHID1-202ENST00000429789 CLIP1P30622 1438 aa22.88■■□□□ 1.25
CHID1-202ENST00000429789 C9orf84Q5VXU9 1444 aa22.87■■□□□ 1.25
CHID1-202ENST00000429789 LRRIQ1Q96JM4 1722 aa22.86■■□□□ 1.25
CHID1-202ENST00000429789 ARHGAP5Q13017 1502 aa22.86■■□□□ 1.25
CHID1-202ENST00000429789 ZNF518AQ6AHZ1 1483 aa22.85■■□□□ 1.25
CHID1-202ENST00000429789 ARHGEF12Q9NZN5 1544 aa22.84■■□□□ 1.25
CHID1-202ENST00000429789 AFAP1Q8N556 730 aa22.83■■□□□ 1.25
CHID1-202ENST00000429789 KDM5CP41229 1560 aa22.8■■□□□ 1.24
CHID1-202ENST00000429789 MYT1LQ9UL68 1186 aa22.8■■□□□ 1.24
CHID1-202ENST00000429789 CDC42BPBQ9Y5S2 1711 aa22.79■■□□□ 1.24
CHID1-202ENST00000429789 CASKIN1Q8WXD9 1431 aa22.77■■□□□ 1.24
CHID1-202ENST00000429789 CEBPAP49715 358 aaPredicted RBP22.76■■□□□ 1.23
CHID1-202ENST00000429789 CCDC18Q5T9S5 1454 aa22.76■■□□□ 1.23
CHID1-202ENST00000429789 DIP2CQ9Y2E4 1556 aa22.74■■□□□ 1.23
CHID1-202ENST00000429789 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
CHID1-202ENST00000429789 MLH3Q9UHC1 1453 aa22.73■■□□□ 1.23
CHID1-202ENST00000429789 PREX2Q70Z35 1606 aa22.73■■□□□ 1.23
CHID1-202ENST00000429789 REREQ9P2R6 1566 aa22.72■■□□□ 1.23
CHID1-202ENST00000429789 TRAPPC8Q9Y2L5 1435 aa22.7■■□□□ 1.22
CHID1-202ENST00000429789 ABCC1P33527 1531 aa22.7■■□□□ 1.22
CHID1-202ENST00000429789 ABCA6Q8N139 1617 aa22.7■■□□□ 1.22
CHID1-202ENST00000429789 ITSN2Q9NZM3 1697 aa22.68■■□□□ 1.22
CHID1-202ENST00000429789 CERKQ8TCT0 537 aa22.68■■□□□ 1.22
CHID1-202ENST00000429789 SETD1BQ9UPS6 1966 aaKnown RBP22.68■■□□□ 1.22
CHID1-202ENST00000429789 CDC42BPAQ5VT25 1732 aa22.67■■□□□ 1.22
CHID1-202ENST00000429789 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
CHID1-202ENST00000429789 AGLP35573 1532 aa22.65■■□□□ 1.22
CHID1-202ENST00000429789 UHRF1BP1Q6BDS2 1440 aa22.65■■□□□ 1.22
CHID1-202ENST00000429789 ESF1Q9H501 851 aaKnown RBP22.64■■□□□ 1.21
CHID1-202ENST00000429789 KIDINS220Q9ULH0 1771 aa22.63■■□□□ 1.21
CHID1-202ENST00000429789 ZNF777Q9ULD5 760 aaPredicted RBP22.62■■□□□ 1.21
CHID1-202ENST00000429789 DMRT2Q9Y5R5 561 aa22.62■■□□□ 1.21
CHID1-202ENST00000429789 C3P01024 1663 aa22.62■■□□□ 1.21
CHID1-202ENST00000429789 STRCQ7RTU9 1775 aa22.61■■□□□ 1.21
CHID1-202ENST00000429789 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
CHID1-202ENST00000429789 SAMD9LQ8IVG5 1584 aa22.57■■□□□ 1.2
CHID1-202ENST00000429789 CNTLNQ9NXG0 1405 aa22.55■■□□□ 1.2
CHID1-202ENST00000429789 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
CHID1-202ENST00000429789 HNRNPMP52272 730 aaKnown RBP eCLIP22.54■■□□□ 1.22e-7■■■■□ 25.4
CHID1-202ENST00000429789 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
CHID1-202ENST00000429789 CFDP1Q9UEE9 299 aaPredicted RBP22.51■■□□□ 1.19
CHID1-202ENST00000429789 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
CHID1-202ENST00000429789 PTPRTO14522 1441 aa22.49■■□□□ 1.19
CHID1-202ENST00000429789 KIAA1107Q9UPP5 1409 aa22.49■■□□□ 1.19
CHID1-202ENST00000429789 PLEKHH2Q8IVE3 1493 aa22.49■■□□□ 1.19
CHID1-202ENST00000429789 SUPT6HQ7KZ85 1726 aaKnown RBP22.48■■□□□ 1.19
CHID1-202ENST00000429789 ATP7AQ04656 1500 aa22.47■■□□□ 1.19
CHID1-202ENST00000429789 MROH2AA6NES4 1674 aa22.47■■□□□ 1.19
CHID1-202ENST00000429789 MTUS2Q5JR59 1369 aa22.47■■□□□ 1.19
CHID1-202ENST00000429789 ZMYM3Q14202 1370 aa22.46■■□□□ 1.19
CHID1-202ENST00000429789 NPATQ14207 1427 aa22.45■■□□□ 1.18
CHID1-202ENST00000429789 INO80Q9ULG1 1556 aaPredicted RBP22.44■■□□□ 1.18
CHID1-202ENST00000429789 A2MP01023 1474 aa22.43■■□□□ 1.18
CHID1-202ENST00000429789 NCOA1Q15788 1441 aa22.42■■□□□ 1.18
CHID1-202ENST00000429789 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
CHID1-202ENST00000429789 CLTCQ00610 1675 aaKnown RBP22.4■■□□□ 1.18
CHID1-202ENST00000429789 GGT6Q6P531 493 aa22.39■■□□□ 1.17
CHID1-202ENST00000429789 CAMSAP1Q5T5Y3 1602 aa22.39■■□□□ 1.17
CHID1-202ENST00000429789 TIAM1Q13009 1591 aa22.38■■□□□ 1.17
CHID1-202ENST00000429789 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
CHID1-202ENST00000429789 EHBP1L1Q8N3D4 1523 aa22.36■■□□□ 1.17
CHID1-202ENST00000429789 ADGBQ8N7X0 1667 aa22.36■■□□□ 1.17
CHID1-202ENST00000429789 LTBP4Q8N2S1 1624 aa22.36■■□□□ 1.17
CHID1-202ENST00000429789 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
CHID1-202ENST00000429789 MBD5Q9P267 1494 aa22.34■■□□□ 1.17
CHID1-202ENST00000429789 PTPRKQ15262 1439 aa22.33■■□□□ 1.17
CHID1-202ENST00000429789 NCKAP5LQ9HCH0 1330 aa22.32■■□□□ 1.16
CHID1-202ENST00000429789 CEP162Q5TB80 1403 aa22.32■■□□□ 1.16
CHID1-202ENST00000429789 MYO3AQ8NEV4 1616 aa22.31■■□□□ 1.16
CHID1-202ENST00000429789 RTEL1-TNFRSF6BF6WH68 1400 aa22.31■■□□□ 1.16
CHID1-202ENST00000429789 ZNF142P52746 1687 aaPredicted RBP22.3■■□□□ 1.16
CHID1-202ENST00000429789 IQSEC2Q5JU85 1478 aa22.3■■□□□ 1.16
CHID1-202ENST00000429789 PKD2Q13563 968 aa22.28■■□□□ 1.16
CHID1-202ENST00000429789 CEP170BQ9Y4F5 1589 aaPredicted RBP22.28■■□□□ 1.16
CHID1-202ENST00000429789 PLA2R1Q13018 1463 aa22.28■■□□□ 1.16
CHID1-202ENST00000429789 DHX29Q7Z478 1369 aaKnown RBP22.27■■□□□ 1.16
CHID1-202ENST00000429789 DISP3Q9P2K9 1392 aa22.26■■□□□ 1.15
CHID1-202ENST00000429789 ZNF335Q9H4Z2 1342 aaPredicted RBP22.24■■□□□ 1.15
CHID1-202ENST00000429789 TCOF1Q13428 1488 aaKnown RBP22.23■■□□□ 1.15
CHID1-202ENST00000429789 NCOA2Q15596 1464 aa22.23■■□□□ 1.15
CHID1-202ENST00000429789 RSPH4AQ5TD94 716 aa22.23■■□□□ 1.15
CHID1-202ENST00000429789 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
CHID1-202ENST00000429789 KIF3BO15066 747 aa22.22■■□□□ 1.15
CHID1-202ENST00000429789 CAMSAP2Q08AD1 1489 aa22.22■■□□□ 1.15
CHID1-202ENST00000429789 A2ML1A8K2U0 1454 aa22.2■■□□□ 1.14
CHID1-202ENST00000429789 DNMT1P26358 1616 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms