RNA–Protein interactions for RNA: ENST00000429280.1

SKP1P3-201, Transcript of S-phase kinase associated protein 1 pseudogene 3, humanhuman

BASIC

Gene SKP1P3, Length 487 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P3-201ENST00000429280 MICALL2Q8IY33 904 aa9.21□□□□□ -0.94
SKP1P3-201ENST00000429280 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.94
SKP1P3-201ENST00000429280 LMOD2Q6P5Q4 547 aa9.19□□□□□ -0.94
SKP1P3-201ENST00000429280 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
SKP1P3-201ENST00000429280 SEMA3EO15041 775 aa9.18□□□□□ -0.94
SKP1P3-201ENST00000429280 PPP1R15BQ5SWA1 713 aa9.18□□□□□ -0.94
SKP1P3-201ENST00000429280 TMEM121BQ9BXQ6 578 aaPredicted RBP9.16□□□□□ -0.94
SKP1P3-201ENST00000429280 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
SKP1P3-201ENST00000429280 G3V3G9 751 aa9.15□□□□□ -0.94
SKP1P3-201ENST00000429280 PLCG2P16885 1265 aa9.15□□□□□ -0.94
SKP1P3-201ENST00000429280 TMC2Q8TDI7 906 aa9.15□□□□□ -0.94
SKP1P3-201ENST00000429280 DCBLD2Q96PD2 775 aa9.15□□□□□ -0.94
SKP1P3-201ENST00000429280 DSG2Q14126 1118 aa9.14□□□□□ -0.95
SKP1P3-201ENST00000429280 FOXK1P85037 733 aa9.13□□□□□ -0.95
SKP1P3-201ENST00000429280 L3MBTL3Q96JM7 780 aaPredicted RBP9.13□□□□□ -0.95
SKP1P3-201ENST00000429280 SMYD5Q6GMV2 418 aa9.12□□□□□ -0.95
SKP1P3-201ENST00000429280 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
SKP1P3-201ENST00000429280 KIF3CO14782 793 aa9.1□□□□□ -0.95
SKP1P3-201ENST00000429280 SEC24BO95487 1268 aa9.1□□□□□ -0.95
SKP1P3-201ENST00000429280 C2orf72A6NCS6 295 aa9.09□□□□□ -0.95
SKP1P3-201ENST00000429280 SLC39A7Q92504 469 aa9.09□□□□□ -0.95
SKP1P3-201ENST00000429280 EMILIN3Q9NT22 766 aa9.09□□□□□ -0.95
SKP1P3-201ENST00000429280 PLPP6Q8IY26 295 aa9.08□□□□□ -0.96
SKP1P3-201ENST00000429280 COLQQ9Y215 455 aaPredicted RBP9.08□□□□□ -0.96
SKP1P3-201ENST00000429280 C7P10643 843 aa9.07□□□□□ -0.96
SKP1P3-201ENST00000429280 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
SKP1P3-201ENST00000429280 SPDYE16A6NNV3 312 aaPredicted RBP9.06□□□□□ -0.96
SKP1P3-201ENST00000429280 DPYSL4O14531 572 aa9.06□□□□□ -0.96
SKP1P3-201ENST00000429280 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
SKP1P3-201ENST00000429280 PDIA6Q15084 440 aa9.03□□□□□ -0.96
SKP1P3-201ENST00000429280 TMEM92Q6UXU6 159 aa9.03□□□□□ -0.96
SKP1P3-201ENST00000429280 MLLT3P42568 568 aaPredicted RBP9.02□□□□□ -0.97
SKP1P3-201ENST00000429280 POTEIP0CG38 1075 aa9.01□□□□□ -0.97
SKP1P3-201ENST00000429280 METRNQ9UJH8 293 aa9.01□□□□□ -0.97
SKP1P3-201ENST00000429280 MAP3K9P80192 1104 aa9□□□□□ -0.97
SKP1P3-201ENST00000429280 ZMYND10O75800 440 aa8.98□□□□□ -0.97
SKP1P3-201ENST00000429280 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
SKP1P3-201ENST00000429280 SP7Q8TDD2 431 aaPredicted RBP8.98□□□□□ -0.97
SKP1P3-201ENST00000429280 C3orf67Q6ZVT6 689 aa8.96□□□□□ -0.98
SKP1P3-201ENST00000429280 OXER1Q8TDS5 423 aa8.96□□□□□ -0.98
SKP1P3-201ENST00000429280 GPIHBP1Q8IV16 184 aa8.95□□□□□ -0.98
SKP1P3-201ENST00000429280 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
SKP1P3-201ENST00000429280 SLC24A3Q9HC58 644 aa8.95□□□□□ -0.98
SKP1P3-201ENST00000429280 TBC1D12O60347 775 aa8.94□□□□□ -0.98
SKP1P3-201ENST00000429280 BARGINQ6ZT62 677 aa8.94□□□□□ -0.98
SKP1P3-201ENST00000429280 GRXCR2A6NFK2 248 aa8.91□□□□□ -0.98
SKP1P3-201ENST00000429280 PTGER2P43116 358 aa8.91□□□□□ -0.98
SKP1P3-201ENST00000429280 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
SKP1P3-201ENST00000429280 PTCD2Q8WV60 388 aaKnown RBP8.9□□□□□ -0.98
SKP1P3-201ENST00000429280 SLC34A2O95436 690 aa8.89□□□□□ -0.99
SKP1P3-201ENST00000429280 BRPF1P55201 1214 aaPredicted RBP8.89□□□□□ -0.99
SKP1P3-201ENST00000429280 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.89□□□□□ -0.99
SKP1P3-201ENST00000429280 EVI5O60447 810 aa8.88□□□□□ -0.99
SKP1P3-201ENST00000429280 OSBPP22059 807 aa8.87□□□□□ -0.99
SKP1P3-201ENST00000429280 KRI1Q8N9T8 703 aaKnown RBP8.87□□□□□ -0.99
SKP1P3-201ENST00000429280 NEUROD2Q15784 382 aa8.86□□□□□ -0.99
SKP1P3-201ENST00000429280 DDX12PQ92771 950 aa8.86□□□□□ -0.99
SKP1P3-201ENST00000429280 AK7Q96M32 723 aa8.86□□□□□ -0.99
SKP1P3-201ENST00000429280 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
SKP1P3-201ENST00000429280 ANO8Q9HCE9 1232 aaPredicted RBP8.85□□□□□ -0.99
SKP1P3-201ENST00000429280 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
SKP1P3-201ENST00000429280 GPR37O15354 613 aa8.84□□□□□ -0.99
SKP1P3-201ENST00000429280 PCDHGA4Q9Y5G9 962 aa8.79□□□□□ -1
SKP1P3-201ENST00000429280 GTF3C3Q9Y5Q9 886 aa8.79□□□□□ -1
SKP1P3-201ENST00000429280 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
SKP1P3-201ENST00000429280 TRIM66O15016 1216 aa8.78□□□□□ -1
SKP1P3-201ENST00000429280 GNPATO15228 680 aa8.78□□□□□ -1
SKP1P3-201ENST00000429280 FCHSD2O94868 740 aa8.78□□□□□ -1
SKP1P3-201ENST00000429280 PHF14O94880 888 aa8.78□□□□□ -1
SKP1P3-201ENST00000429280 PRIM1P49642 420 aaKnown RBP8.78□□□□□ -1
SKP1P3-201ENST00000429280 HIC1Q14526 733 aa8.78□□□□□ -1
SKP1P3-201ENST00000429280 EPAS1Q99814 870 aa8.78□□□□□ -1
SKP1P3-201ENST00000429280 POTEJP0CG39 1038 aa8.76□□□□□ -1.01
SKP1P3-201ENST00000429280 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
SKP1P3-201ENST00000429280 KDM4FA0A1W2PPD8 638 aa8.74□□□□□ -1.01
SKP1P3-201ENST00000429280 POTEB2H3BUK9 544 aa8.74□□□□□ -1.01
SKP1P3-201ENST00000429280 IRF6O14896 467 aa8.74□□□□□ -1.01
SKP1P3-201ENST00000429280 EN1Q05925 392 aaPredicted RBP8.74□□□□□ -1.01
SKP1P3-201ENST00000429280 PDE4DQ08499 809 aa8.74□□□□□ -1.01
SKP1P3-201ENST00000429280 PTGDRQ13258 359 aa8.74□□□□□ -1.01
SKP1P3-201ENST00000429280 DOK7Q18PE1 504 aa8.73□□□□□ -1.01
SKP1P3-201ENST00000429280 SLAIN1Q8ND83 568 aa8.73□□□□□ -1.01
SKP1P3-201ENST00000429280 PCDHGA10Q9Y5H3 936 aa8.73□□□□□ -1.01
SKP1P3-201ENST00000429280 FECHP22830 423 aa8.72□□□□□ -1.01
SKP1P3-201ENST00000429280 TYW1BQ6NUM6 668 aa8.72□□□□□ -1.01
SKP1P3-201ENST00000429280 CCDC102AQ96A19 550 aa8.72□□□□□ -1.01
SKP1P3-201ENST00000429280 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
SKP1P3-201ENST00000429280 MAP3K7O43318 606 aa8.71□□□□□ -1.02
SKP1P3-201ENST00000429280 MAMSTRQ6ZN01 415 aa8.71□□□□□ -1.02
SKP1P3-201ENST00000429280 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
SKP1P3-201ENST00000429280 JPH4Q96JJ6 628 aa8.71□□□□□ -1.02
SKP1P3-201ENST00000429280 SCUBE2Q9NQ36 999 aa8.71□□□□□ -1.02
SKP1P3-201ENST00000429280 DAXXQ9UER7 740 aaPredicted RBP8.71□□□□□ -1.02
SKP1P3-201ENST00000429280 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
SKP1P3-201ENST00000429280 RBM33Q96EV2 1170 aaKnown RBP8.7□□□□□ -1.02
SKP1P3-201ENST00000429280 KDM4CQ9H3R0 1056 aa8.7□□□□□ -1.02
SKP1P3-201ENST00000429280 NPDC1Q9NQX5 325 aaPredicted RBP8.7□□□□□ -1.02
SKP1P3-201ENST00000429280 RIMBP2O15034 1052 aa8.69□□□□□ -1.02
SKP1P3-201ENST00000429280 CDHR5Q9HBB8 845 aa8.69□□□□□ -1.02
SKP1P3-201ENST00000429280 ZSWIM6Q9HCJ5 1215 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms